INFERNAL1/a [1.1.4 | Dec 2020] NAME U7 ACC RF00066 DESC U7 small nuclear RNA STATES 193 NODES 54 CLEN 63 W 82 ALPH RNA RF no CONS yes MAP yes DATE Fri Apr 4 12:54:49 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 49 EFFN 10.745667 CKSUM 1896368943 NULL 0.000 0.000 0.000 0.000 GA 34.00 TC 34.00 NC 33.90 EFP7GF -16.1686 0.71894 ECMLC 0.61651 -9.00813 0.60937 1600000 451076 0.002660 ECMGC 0.39538 -18.91590 -4.84829 1600000 104145 0.003841 ECMLI 0.61220 -7.02458 1.88384 1600000 280347 0.004280 ECMGI 0.41895 -14.39485 -1.76096 1600000 79570 0.005027 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 102 -8.757 -8.964 -0.160 -3.310 IL 1 1 2 1 4 1 21 85 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 2 - a - - - ML 3 2 3 5 3 2 20 82 102 -9.557 -0.007 -8.211 0.540 -0.203 -0.357 -0.159 D 4 2 3 5 3 0 18 80 101 -8.120 -1.147 -0.876 IL 5 5 3 5 3 1 20 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 3 - A - - - ML 6 5 3 8 3 1 19 81 101 -9.629 -0.006 -8.283 1.524 -2.172 -0.475 -2.450 D 7 5 3 8 3 0 17 79 100 -7.452 -0.483 -1.843 IL 8 8 3 8 3 1 19 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 4 - G - - - ML 9 8 3 11 3 1 18 80 100 -9.698 -0.081 -4.220 0.349 -1.722 1.143 -2.214 D 10 8 3 11 3 0 16 78 99 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 18 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 5 - U - - - ML 12 11 3 14 3 1 17 79 99 -9.623 -0.141 -3.450 0.116 -2.273 -2.672 1.352 D 13 11 3 14 3 0 15 77 98 -7.528 -3.041 -0.196 IL 14 14 3 14 3 1 18 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 6 - G - - - ML 15 14 3 17 3 1 16 78 98 -1.672 -0.668 -4.131 -0.241 -2.462 1.318 -1.060 D 16 14 3 17 3 0 15 77 98 -0.308 -4.047 -2.926 IL 17 17 3 17 3 1 17 77 98 -3.486 -0.157 -6.186 0.000 0.000 0.000 0.000 [ MATL 6 ] 8 - U - - - ML 18 17 3 20 3 1 16 76 97 -9.629 -0.006 -8.283 -1.388 -1.408 -3.137 1.645 D 19 17 3 20 3 0 12 74 95 -7.452 -2.965 -0.207 IL 20 20 3 20 3 1 16 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 9 - U - - - ML 21 20 3 23 3 1 15 75 96 -9.629 -0.060 -4.663 -1.507 -1.424 -3.191 1.663 D 22 20 3 23 3 0 12 74 95 -7.452 -0.483 -1.843 IL 23 23 3 23 3 1 15 77 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - A - - - ML 24 23 3 26 3 1 14 74 95 -9.647 -0.104 -3.876 1.116 -1.525 -1.788 0.257 D 25 23 3 26 3 0 10 72 93 -7.219 -2.732 -0.247 IL 26 26 3 26 3 1 15 76 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 11 - c - - - ML 27 26 3 29 3 1 14 73 94 -9.550 -0.007 -8.204 -0.001 0.765 -1.329 -0.146 D 28 26 3 29 3 0 9 71 92 -8.171 -3.684 -0.122 IL 29 29 3 29 3 1 14 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 12 - A - - - ML 30 29 3 32 3 1 13 72 93 -9.550 -0.007 -8.204 1.365 -2.119 -1.941 -0.098 D 31 29 3 32 3 0 9 71 92 -8.171 -0.274 -2.562 IL 32 32 3 32 3 1 12 74 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - G - - - ML 33 32 3 35 3 1 12 71 92 -9.698 -0.006 -8.352 -2.065 -2.840 1.273 0.269 D 34 32 3 35 3 0 6 70 90 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 11 73 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - C - - - ML 36 35 3 38 3 1 12 70 91 -9.698 -0.006 -8.352 -1.217 1.695 -3.840 -1.932 D 37 35 3 38 3 0 5 69 89 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 10 72 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - U - - - ML 39 38 3 41 3 1 11 69 90 -9.698 -0.006 -8.352 -4.462 -4.067 -5.270 1.952 D 40 38 3 41 3 0 5 68 88 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 9 71 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - C - - - ML 42 41 3 44 3 1 10 68 89 -9.698 -0.006 -8.352 -4.037 1.855 -4.756 -1.807 D 43 41 3 44 3 0 4 67 87 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 8 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - U - - - ML 45 44 3 47 3 1 9 67 88 -9.698 -0.006 -8.352 -4.462 -4.067 -5.270 1.952 D 46 44 3 47 3 0 4 66 86 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 7 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - U - - - ML 48 47 3 50 3 1 8 66 87 -9.698 -0.006 -8.352 -2.990 -2.858 -2.723 1.842 D 49 47 3 50 3 0 4 65 85 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 7 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 19 - U - - - ML 51 50 3 53 3 1 7 65 86 -9.698 -0.028 -5.816 -1.470 -2.580 -2.544 1.723 D 52 50 3 53 3 0 4 64 84 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 6 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 20 - u - - - ML 54 53 3 56 3 1 6 64 85 -9.676 -0.006 -8.330 -0.544 -0.679 -0.196 0.861 D 55 53 3 56 3 0 4 63 83 -6.712 -2.225 -0.365 IL 56 56 3 56 3 1 6 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 21 - A - - - ML 57 56 3 59 3 1 5 63 84 -9.676 -0.570 -1.621 1.659 -2.066 -1.394 -2.164 D 58 56 3 59 3 0 4 62 82 -6.712 -2.225 -0.365 IL 59 59 3 59 3 1 6 65 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 22 - G - - - ML 60 59 3 62 3 1 6 62 83 -9.115 -0.009 -7.769 -0.517 -1.247 1.364 -1.714 D 61 59 3 62 3 0 3 61 82 -9.661 -0.155 -3.314 IL 62 62 3 62 3 1 5 64 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 23 - A - - - ML 63 62 3 65 3 1 6 61 82 -9.676 -0.006 -8.330 1.540 -2.655 -2.824 -0.336 D 64 62 3 65 3 0 0 60 80 -6.712 -2.225 -0.365 IL 65 65 3 65 3 1 5 63 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 24 - A - - - ML 66 65 3 68 3 1 6 60 81 -9.676 -0.006 -8.330 1.640 -3.026 -0.933 -2.082 D 67 65 3 68 3 0 0 59 79 -6.712 -2.225 -0.365 IL 68 68 3 68 3 1 4 62 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - U - - - ML 69 68 3 71 3 1 6 59 80 -9.676 -0.006 -8.330 -4.430 -4.037 -5.237 1.951 D 70 68 3 71 3 0 0 58 78 -6.712 -2.225 -0.365 IL 71 71 3 71 3 1 4 61 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - U - - - ML 72 71 3 74 3 1 5 58 79 -9.676 -0.006 -8.330 -4.430 -4.037 -5.237 1.951 D 73 71 3 74 3 0 0 57 77 -6.712 -2.225 -0.365 IL 74 74 3 74 3 1 4 60 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - U - - - ML 75 74 3 77 3 1 5 57 78 -9.676 -0.006 -8.330 -4.430 -4.037 -5.237 1.951 D 76 74 3 77 3 0 0 56 77 -6.712 -0.930 -1.103 IL 77 77 3 77 3 1 3 59 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - G - - - ML 78 77 3 80 3 1 5 56 77 -9.698 -0.006 -8.352 -1.536 -0.978 1.524 -1.882 D 79 77 3 80 3 0 0 55 75 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 2 58 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - U - - - ML 81 80 3 83 3 1 4 55 76 -9.698 -0.006 -8.352 -4.462 -4.067 -5.270 1.952 D 82 80 3 83 3 0 0 54 74 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 2 57 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - C - - - ML 84 83 3 86 3 1 4 54 75 -9.698 -0.006 -8.352 -4.963 1.958 -5.495 -4.051 D 85 83 3 86 3 0 0 53 73 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - U - - - ML 87 86 3 89 3 1 4 53 74 -9.698 -0.006 -8.352 -2.148 -0.687 -3.328 1.611 D 88 86 3 89 3 0 0 52 72 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - A - - - ML 90 89 3 92 3 1 3 52 73 -9.698 -0.006 -8.352 1.570 -2.725 -2.896 -0.422 D 91 89 3 92 3 0 0 51 71 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 54 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - G - - - ML 93 92 3 95 3 1 3 51 72 -9.698 -0.006 -8.352 -4.379 -5.933 1.966 -5.112 D 94 92 3 95 3 0 0 50 70 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 53 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - c - - - ML 96 95 3 98 3 1 2 50 71 -9.698 -0.006 -8.352 -0.764 0.701 -0.677 0.215 D 97 95 3 98 3 0 0 49 69 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 52 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - A - - - ML 99 98 3 101 3 1 2 49 70 -3.238 -0.167 -8.338 1.470 -1.915 -2.566 -0.331 D 100 98 3 101 3 0 0 48 68 -5.620 -0.734 -1.403 IL 101 101 3 101 3 1 1 49 70 -2.988 -0.239 -5.226 0.000 0.000 0.000 0.000 [ MATR 34 ] - 75 - a - - MR 102 101 3 104 3 1 1 48 69 -10.020 -0.006 -8.338 0.506 -0.027 -1.342 0.268 D 103 101 3 104 3 0 0 46 67 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 49 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 74 - a - - MR 105 104 3 107 3 1 1 47 68 -10.020 -0.006 -8.338 0.387 0.373 -0.711 -0.347 D 106 104 3 107 3 0 0 45 66 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 48 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 73 - C - - MR 108 107 3 110 5 1 1 46 67 -8.692 -0.013 -8.508 -8.720 -9.611 -1.370 1.572 -2.103 -1.297 D 109 107 3 110 5 0 0 45 65 -5.352 -0.707 -2.978 -4.409 -2.404 IR 110 110 3 110 5 1 1 46 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 37 72 G C - - MP 111 110 3 115 6 2 2 45 66 -10.075 -10.014 -0.011 -8.791 -9.070 -9.466 -7.695 -4.594 -8.946 -1.966 -8.978 -2.471 -3.566 -9.022 -5.976 3.919 -6.169 -2.508 -3.935 -6.165 -5.889 -7.969 ML 112 110 3 115 6 1 1 44 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 3 115 6 1 1 43 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 114 110 3 115 6 0 0 41 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 45 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 44 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 38 71 G C - - MP 117 116 6 121 6 2 2 43 64 -10.075 -10.014 -0.011 -8.791 -9.070 -9.466 -7.626 -4.613 -8.846 -1.942 -9.045 -5.865 -3.675 -8.745 -5.965 3.935 -6.187 -2.490 -4.041 -6.262 -5.998 -7.697 ML 118 116 6 121 6 1 1 41 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 41 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 120 116 6 121 6 0 0 39 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 43 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 42 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 39 70 u g - - MP 123 122 6 127 6 2 2 41 62 -10.075 -3.209 -0.176 -8.791 -9.070 -9.466 -5.046 -4.967 -4.927 -1.083 -3.794 -5.529 2.020 -4.513 -4.902 -0.907 -5.308 1.373 1.168 -5.193 2.513 -3.735 ML 124 122 6 127 6 1 1 39 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 39 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 40 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 40 61 -2.617 -0.331 -7.219 -5.387 -6.492 0.000 0.000 0.000 0.000 [ MATP 40 ] 40 67 u a - - MP 129 128 6 133 6 2 2 39 59 -10.075 -10.014 -0.011 -8.791 -9.070 -9.466 -4.740 -4.596 -4.693 1.512 -3.625 -5.398 2.003 -4.302 -4.631 -0.435 -5.090 -2.375 2.848 -4.917 -0.881 -3.442 ML 130 128 6 133 6 1 1 37 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 37 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 38 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 38 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 41 66 U A - - MP 135 134 6 139 6 2 2 37 57 -2.969 -10.014 -0.208 -8.791 -9.070 -9.466 -6.059 -6.099 -5.621 -2.157 -4.122 -5.938 2.091 -4.972 -5.654 -2.016 -5.892 -4.066 3.333 -6.030 -0.191 -4.440 ML 136 134 6 139 6 1 1 35 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 35 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 32 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 36 57 -4.359 -0.416 -2.540 -6.277 -7.053 -6.714 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 35 56 -3.717 -0.180 -7.228 -5.396 -6.502 0.000 0.000 0.000 0.000 [ MATP 42 ] 43 64 c g - - MP 141 140 6 145 6 2 2 34 55 -10.075 -10.014 -0.011 -8.791 -9.070 -9.466 -5.745 -5.696 -5.424 -1.700 -4.016 -5.846 2.847 -4.826 -5.421 -1.529 -5.724 -3.545 2.670 -5.778 0.496 -4.199 ML 142 140 6 145 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 33 53 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 30 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 34 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 44 63 c g - - MP 147 146 6 151 6 2 2 32 53 -10.075 -10.014 -0.011 -8.791 -9.070 -9.466 -3.959 -3.864 -4.035 -0.041 -3.253 -4.869 2.696 -1.617 -3.980 1.103 -4.509 -1.745 2.129 -4.204 -0.874 -1.462 ML 148 146 6 151 6 1 1 31 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 30 51 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 6 151 6 0 0 28 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 32 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 45 62 c g - - MP 153 152 6 157 6 2 2 30 51 -3.720 -2.968 -0.501 -8.791 -9.070 -3.543 -4.726 -4.600 -4.680 0.191 -2.087 -5.382 2.681 -4.295 -4.622 -0.461 -5.080 -2.397 1.418 -4.904 2.081 -3.439 ML 154 152 6 157 6 1 1 27 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 27 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 24 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 31 51 -1.725 -1.045 -2.463 -6.200 -6.977 -6.637 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 29 50 -1.300 -1.585 -8.332 -6.499 -2.021 0.000 0.000 0.000 0.000 [ MATP 45 ] 48 59 g c - - MP 159 158 6 163 6 2 2 23 41 -9.763 -9.702 -0.067 -8.478 -8.758 -4.733 -3.848 -2.866 -3.776 1.214 -4.114 -4.454 1.304 -4.182 -4.042 2.799 -4.404 0.377 0.882 -3.727 -1.562 -2.738 ML 160 158 6 163 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 20 39 -11.945 -10.643 -0.995 -7.123 -7.140 -1.050 IL 163 163 5 163 6 1 1 23 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 49 58 g c - - MP 165 164 6 169 6 2 2 21 39 -9.901 -9.841 -0.131 -8.617 -8.897 -3.646 -4.054 -3.391 -4.031 0.869 -3.655 -4.770 1.741 -4.064 -4.127 2.552 -4.565 -1.113 1.754 -4.082 -1.173 -2.884 ML 166 164 6 169 6 1 1 20 38 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 20 38 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 17 36 -11.297 -9.995 -5.792 -6.474 -6.492 -0.062 IL 169 169 5 169 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 50 57 u a - - MP 171 170 6 175 4 2 2 19 37 -8.308 -1.642 -2.411 -1.034 -1.939 -2.136 -1.123 0.799 -1.372 -2.040 1.589 -2.457 -2.195 1.610 -2.766 -0.774 1.747 -2.273 0.531 -1.059 ML 172 170 6 175 4 1 1 19 37 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 18 36 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 17 35 -7.302 -1.678 -1.311 -1.845 IL 175 175 5 175 4 1 1 20 38 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 18 36 -3.242 -0.244 -4.331 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - u - - - ML 177 176 6 179 3 1 1 16 35 -8.929 -0.011 -7.584 -0.092 -0.440 -0.076 0.461 D 178 176 6 179 3 0 0 15 34 -9.949 -0.075 -4.341 IL 179 179 3 179 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - u - - - ML 180 179 3 182 3 1 1 15 33 -9.698 -0.006 -8.352 -0.152 -0.261 -1.509 0.936 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - u - - - ML 183 182 3 185 3 1 1 14 32 -9.698 -0.006 -8.352 0.219 -0.670 -1.299 0.849 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - u - - - ML 186 185 3 188 3 1 1 12 30 -9.698 -0.086 -4.147 0.266 -0.695 -0.463 0.541 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - u - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -0.206 -0.937 0.092 0.628 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 53 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME U7 ACC RF00066 DESC U7 small nuclear RNA LENG 63 MAXL 123 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Apr 4 12:54:49 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 49 EFFN 26.309387 CKSUM 1896368943 STATS LOCAL MSV -7.8745 0.71894 STATS LOCAL VITERBI -8.6530 0.71894 STATS LOCAL FORWARD -4.1737 0.71894 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.50439 1.54559 1.50646 1.07012 1.38629 1.38629 1.38629 1.38629 0.17790 2.84019 2.25798 0.10323 2.32199 0.00000 * 1 0.96488 1.48590 1.62177 1.63411 2 a - - : 1.38629 1.38629 1.38629 1.38629 0.00694 5.66664 5.66664 1.46634 0.26236 0.72005 0.66695 2 0.27789 3.17851 1.70145 3.98733 3 A - - : 1.38629 1.38629 1.38629 1.38629 0.00657 5.72165 5.72165 1.46634 0.26236 0.10945 2.26653 3 1.11476 2.72413 0.53519 3.87072 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.06350 5.77362 2.84019 1.46634 0.26236 1.09861 0.40547 4 1.25114 4.02416 4.45690 0.37929 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.00660 5.71673 5.71673 1.46634 0.26236 0.10114 2.34142 5 1.58701 3.83459 0.40066 2.26360 6 G - - : 1.38629 1.38629 1.38629 1.38629 0.43447 1.20852 2.92339 0.02069 3.88847 1.09861 0.40547 6 2.47816 2.50969 4.40418 0.19531 8 U - - : 1.38629 1.38629 1.38629 1.38629 0.00657 5.72165 5.72165 1.46634 0.26236 2.95968 0.05323 7 2.58033 2.51346 4.42464 0.18478 9 U - - : 1.38629 1.38629 1.38629 1.38629 0.04748 5.72165 3.14429 1.46634 0.26236 0.10945 2.26653 8 0.52137 2.85896 3.14720 1.18420 10 A - - : 1.38629 1.38629 1.38629 1.38629 0.08086 5.73508 2.59765 1.46634 0.26236 2.71882 0.06823 9 1.41200 0.73784 2.50932 1.62517 11 c - - : 1.38629 1.38629 1.38629 1.38629 0.00698 5.66120 5.66120 1.46634 0.26236 3.61649 0.02724 10 0.35513 3.68576 3.27943 1.44313 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.00698 5.66120 5.66120 1.46634 0.26236 0.05525 2.92335 11 4.02786 4.59323 0.44846 1.09825 13 G - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 12 2.21977 0.16315 4.92786 3.36206 14 C - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 13 5.76263 5.36336 6.37798 0.00957 15 U - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 14 5.14723 0.07599 5.52463 2.75875 16 C - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 15 5.76263 5.36336 6.37798 0.00957 17 U - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 16 4.20493 4.09571 3.40607 0.06693 18 U - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 17 2.50535 3.91807 3.38272 0.14558 19 U - - : 1.38629 1.38629 1.38629 1.38629 0.02252 5.77362 3.95481 1.46634 0.26236 1.09861 0.40547 18 2.00095 1.94215 1.46093 0.71462 20 u - - : 1.38629 1.38629 1.38629 1.38629 0.00634 5.75744 5.75744 1.46634 0.26236 2.09980 0.13066 19 0.18441 3.05357 2.43701 3.38753 21 A - - : 1.38629 1.38629 1.38629 1.38629 0.44459 5.75744 1.03352 1.46634 0.26236 2.09980 0.13066 20 1.89108 2.27424 0.34257 3.31678 22 G - - : 1.38629 1.38629 1.38629 1.38629 0.00981 5.32266 5.32266 1.46634 0.26236 0.06168 2.81645 21 0.26810 4.18036 4.38565 1.57301 23 A - - : 1.38629 1.38629 1.38629 1.38629 0.00634 5.75744 5.75744 1.46634 0.26236 2.09980 0.13066 22 0.20442 4.33578 2.04460 3.16157 24 A - - : 1.38629 1.38629 1.38629 1.38629 0.00634 5.75744 5.75744 1.46634 0.26236 2.09980 0.13066 23 5.73527 5.33934 6.34894 0.00983 25 U - - : 1.38629 1.38629 1.38629 1.38629 0.00634 5.75744 5.75744 1.46634 0.26236 2.09980 0.13066 24 5.73527 5.33934 6.34894 0.00983 26 U - - : 1.38629 1.38629 1.38629 1.38629 0.00634 5.75744 5.75744 1.46634 0.26236 2.09980 0.13066 25 5.73527 5.33934 6.34894 0.00983 27 U - - : 1.38629 1.38629 1.38629 1.38629 0.00634 5.75744 5.75744 1.46634 0.26236 0.28099 1.40665 26 2.85608 1.98554 0.27660 3.06094 28 G - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 27 5.76263 5.36336 6.37798 0.00957 29 U - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 28 5.69799 0.01213 6.01051 5.07468 30 C - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 29 3.29678 1.85802 4.50832 0.22816 31 U - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 30 0.25135 4.21282 4.41982 1.63266 32 A - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 31 5.24224 6.43131 0.01009 5.76257 33 G - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 32 2.20790 0.79442 1.85285 1.26786 34 c - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 33 0.29821 3.14041 4.08251 1.62087 35 A - - : 1.38629 1.38629 1.38629 1.38629 0.13179 2.11721 5.77362 0.05087 3.00375 1.09861 0.40547 34 4.63235 4.09108 0.03000 5.77660 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 35 4.58646 5.69438 0.01698 5.71954 38 G - - < 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 36 4.88431 1.45017 1.58549 0.59229 39 U - - < 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 37 1.60389 1.47136 3.90876 0.59928 40 U - - < 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 38 5.13420 1.38353 5.04597 0.30519 41 U - - < 1.38629 1.38629 1.38629 1.38629 0.22888 1.60211 5.77362 0.03058 3.50275 1.09861 0.40547 39 4.91895 0.76247 4.82355 0.65750 43 U - - < 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 40 3.33033 0.72844 1.95415 1.07919 44 c - - < 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 41 2.83240 0.81487 3.82994 0.74083 45 u - - < 1.38629 1.38629 1.38629 1.38629 0.55860 2.11721 1.17888 0.47711 0.96910 1.09861 0.40547 42 1.93652 1.83574 0.57097 2.03008 48 G - - < 1.38629 1.38629 1.38629 1.38629 0.07677 5.41047 2.66749 1.46634 0.26236 0.58079 0.81975 43 2.25649 1.55682 0.84766 1.36235 49 g - - < 1.38629 1.38629 1.38629 1.38629 0.15024 5.57856 1.99716 1.46634 0.26236 4.09453 0.01680 44 2.02523 1.46180 1.32339 0.99429 50 u - - < 1.38629 1.38629 1.38629 1.38629 0.76729 5.43706 0.63229 1.46634 0.26236 0.32107 1.29234 45 1.56712 1.72881 1.36039 1.02918 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01139 5.17353 5.17353 1.46634 0.26236 0.01359 4.30517 46 1.54365 1.57507 2.72408 0.66592 52 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 47 1.22468 1.94408 2.53221 0.72661 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 48 1.20483 1.96375 1.71544 0.96748 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.06675 5.77362 2.78931 1.46634 0.26236 1.09861 0.40547 49 1.65854 2.20898 1.24045 0.89034 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.51717 1.31775 1.99470 0.02448 3.72214 3.08067 0.04702 50 1.27733 1.34029 1.12873 1.99506 57 g - - > 1.38629 1.38629 1.38629 1.38629 0.03178 5.57106 3.59441 1.46634 0.26236 1.90832 0.16056 51 1.42468 0.88000 1.49515 2.11679 58 c - - > 1.38629 1.38629 1.38629 1.38629 0.00758 5.57856 5.57856 1.46634 0.26236 1.35155 0.29954 52 2.13020 0.73144 1.77215 1.46967 59 c - - > 1.38629 1.38629 1.38629 1.38629 0.46330 1.00180 5.63201 0.27075 1.43887 0.04497 3.12408 53 1.80707 3.99902 0.28239 2.75591 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 54 1.19308 2.01117 0.74680 2.41911 63 g - - > 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 55 0.84155 4.93212 0.59342 4.67649 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.22888 1.60211 5.77362 0.03058 3.50275 1.09861 0.40547 56 0.37277 5.15753 1.21114 4.88398 66 A - - > 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 57 0.63466 4.06861 1.39720 1.58235 67 A - - > 1.38629 1.38629 1.38629 1.38629 0.19099 1.76755 5.77362 0.18678 1.76977 1.09861 0.40547 58 2.12406 4.88310 0.40452 1.58190 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 59 5.78316 0.02116 5.63099 4.24936 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 60 5.85961 0.02016 5.67712 4.29151 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 61 2.47738 0.22712 2.92522 2.72479 73 C - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 62 1.09542 1.02112 1.92912 1.83175 74 c - - : 1.38629 1.38629 1.38629 1.38629 0.00624 5.77362 5.77362 1.46634 0.26236 1.09861 0.40547 63 0.98869 1.36457 2.59923 1.21028 75 a - - : 1.38629 1.38629 1.38629 1.38629 0.00312 5.77051 * 1.46634 0.26236 0.00000 * //