INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD24 ACC RF00069 DESC Small nucleolar RNA SNORD24 STATES 232 NODES 74 CLEN 76 W 148 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:13:56 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 14 EFFN 3.612793 CKSUM 1628717476 NULL 0.000 0.000 0.000 0.000 GA 41.00 TC 41.20 NC 40.80 EFP7GF -9.1772 0.71866 ECMLC 0.62525 -6.12045 2.87202 1600000 331900 0.003616 ECMGC 0.37082 -15.92669 -1.59497 1600000 81299 0.004920 ECMLI 0.55420 -4.28849 5.38023 1600000 254857 0.004709 ECMGI 0.41313 -9.66090 2.50858 1600000 61028 0.006554 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 148 237 -9.349 -9.288 -0.018 -8.065 -8.345 -8.740 IL 1 1 2 1 6 1 31 150 239 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 32 150 238 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 101 u a - - MP 3 2 3 7 6 4 34 149 237 -9.349 -9.288 -0.018 -8.065 -8.345 -8.740 -3.051 -2.907 -3.143 0.635 -2.689 -3.964 1.520 -3.164 -3.158 1.515 -3.677 -0.921 2.541 -3.302 -0.449 -0.620 ML 4 2 3 7 6 1 29 147 235 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 28 146 235 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 24 142 231 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 31 148 237 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 31 148 236 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 100 G C - - MP 9 8 6 13 6 4 33 147 235 -9.349 -9.288 -0.018 -8.065 -8.345 -8.740 -3.788 -2.727 -3.749 0.792 -4.153 -4.303 0.312 -4.166 -1.695 3.237 -4.258 -0.457 0.584 -3.666 -1.649 -2.732 ML 10 8 6 13 6 1 28 145 233 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 27 144 233 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 24 141 230 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 30 146 235 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 30 146 234 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 99 C G - - MP 15 14 6 19 6 3 31 145 233 -9.349 -9.288 -0.018 -8.065 -8.345 -8.740 -5.732 -5.737 -5.208 -1.906 -3.718 -5.462 3.797 -4.649 -5.324 -1.786 -5.429 -3.731 -0.357 -5.718 -1.481 -4.134 ML 16 14 6 19 6 1 27 143 232 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 26 142 231 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 23 140 229 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 29 144 233 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 28 144 233 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 98 a u - - MP 21 20 6 25 4 2 29 143 231 -7.512 -3.960 -0.127 -6.133 -3.711 -3.341 -3.704 2.543 -3.079 -4.483 2.342 -3.578 -3.696 0.674 -4.158 -1.143 0.684 -3.953 -0.766 -2.607 ML 22 20 6 25 4 1 26 142 230 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 24 140 229 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 23 139 228 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 28 142 231 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 27 142 231 -1.692 -0.637 -4.392 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 27 26 6 29 3 1 27 141 229 -2.949 -0.212 -7.148 0.835 -1.349 0.129 -0.454 D 28 26 6 29 3 0 22 138 227 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 27 141 230 -1.222 -0.887 -5.029 0.000 0.000 0.000 0.000 [ MATL 6 ] 8 - A - - - ML 30 29 3 32 3 1 26 139 228 -8.494 -0.014 -7.148 1.024 -1.403 -0.152 -0.539 D 31 29 3 32 3 0 21 137 226 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 26 140 229 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 9 - U - - - ML 33 32 3 35 3 1 25 138 227 -8.494 -0.014 -7.148 -2.494 -2.323 -3.263 1.815 D 34 32 3 35 3 0 21 136 225 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 25 139 228 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - G - - - ML 36 35 3 38 3 1 24 137 226 -4.554 -0.073 -7.148 -2.647 -4.001 1.880 -3.374 D 37 35 3 38 3 0 20 135 224 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 24 138 227 -1.622 -0.678 -4.323 0.000 0.000 0.000 0.000 [ MATL 9 ] 12 - A - - - ML 39 38 3 41 3 1 24 136 225 -8.494 -0.014 -7.148 1.872 -3.434 -2.967 -3.085 D 40 38 3 41 3 0 19 134 223 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 23 137 226 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 13 - U - - - ML 42 41 3 44 3 1 23 135 224 -8.494 -0.014 -7.148 -2.494 -2.323 -3.263 1.815 D 43 41 3 44 3 0 19 133 222 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 22 136 225 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 14 - G - - - ML 45 44 3 47 3 1 22 134 223 -8.494 -0.014 -7.148 -2.647 -4.001 1.880 -3.374 D 46 44 3 47 3 0 18 132 221 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 21 135 224 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 15 - u - - - ML 48 47 3 50 3 1 21 133 222 -8.494 -0.014 -7.148 0.051 -0.726 -1.403 0.987 D 49 47 3 50 3 0 17 131 220 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 21 134 223 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 16 - A - - - ML 51 50 3 53 3 1 20 132 221 -8.494 -0.014 -7.148 1.117 -0.581 -0.783 -0.783 D 52 50 3 53 3 0 17 130 219 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 20 133 222 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 17 - A - - - ML 54 53 3 56 3 1 19 131 220 -8.494 -0.340 -2.269 1.872 -3.434 -2.967 -3.085 D 55 53 3 56 3 0 16 129 218 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 20 132 221 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 18 - u - - - ML 57 56 3 59 3 1 20 131 220 -2.726 -0.252 -6.826 0.274 -0.589 -1.143 0.742 D 58 56 3 59 3 0 15 128 217 -8.052 -2.332 -0.326 IL 59 59 3 59 3 1 19 131 220 -1.923 -0.523 -4.623 0.000 0.000 0.000 0.000 [ MATL 16 ] 20 - A - - - ML 60 59 3 62 3 1 19 130 218 -8.227 -0.017 -6.881 1.170 -0.389 -1.354 -0.750 D 61 59 3 62 3 0 15 127 216 -7.877 -1.516 -0.630 IL 62 62 3 62 3 1 19 130 219 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 21 - a - - - ML 63 62 3 65 3 1 18 129 217 -8.331 -0.126 -3.638 0.961 -1.739 0.391 -1.178 D 64 62 3 65 3 0 14 126 215 -7.454 -2.967 -0.207 IL 65 65 3 65 3 1 18 129 218 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 22 - a - - - ML 66 65 3 68 3 1 17 128 217 -8.223 -0.074 -4.429 0.881 -0.310 -1.164 -0.142 D 67 65 3 68 3 0 14 126 214 -7.893 -3.406 -0.150 IL 68 68 3 68 3 1 18 128 217 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - A - - - ML 69 68 3 71 3 1 16 127 216 -8.167 -0.018 -6.821 1.122 -0.819 -1.226 -0.269 D 70 68 3 71 3 0 14 126 214 -8.066 -0.296 -2.458 IL 71 71 3 71 3 1 16 127 216 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 24 - U - - - ML 72 71 3 74 3 1 16 126 215 -8.494 -0.014 -7.148 -1.067 -1.580 -2.228 1.573 D 73 71 3 74 3 0 11 123 212 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 15 126 215 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - A - - - ML 75 74 3 77 3 1 15 125 214 -8.494 -0.014 -7.148 1.872 -3.434 -2.967 -3.085 D 76 74 3 77 3 0 11 122 211 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 14 125 214 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - U - - - ML 78 77 3 80 3 1 14 124 213 -8.494 -0.014 -7.148 -1.080 -0.798 -1.351 1.356 D 79 77 3 80 3 0 10 122 210 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 14 124 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - U - - - ML 81 80 3 83 3 1 13 123 212 -8.494 -0.061 -4.701 -2.494 -2.323 -3.263 1.815 D 82 80 3 83 3 0 10 121 210 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 13 123 212 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - U - - - ML 84 83 3 86 3 1 12 122 211 -8.448 -0.015 -7.102 -1.003 -1.520 -2.152 1.550 D 85 83 3 86 3 0 9 120 209 -6.679 -0.959 -1.071 IL 86 86 3 86 3 1 12 122 211 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - G - - - ML 87 86 3 89 3 1 11 121 210 -8.494 -0.014 -7.148 -1.750 -2.779 1.694 -1.642 D 88 86 3 89 3 0 8 119 208 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 11 122 210 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - C - - - ML 90 89 3 92 3 1 10 120 209 -8.494 -0.014 -7.148 -1.853 1.612 -1.916 -1.320 D 91 89 3 92 3 0 7 118 207 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 10 121 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - U - - - ML 93 92 3 95 3 1 9 119 208 -8.494 -0.406 -2.043 -2.494 -2.323 -3.263 1.815 D 94 92 3 95 3 0 7 117 206 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 11 120 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - A - - - ML 96 95 3 98 3 1 10 118 207 -8.107 -0.019 -6.761 1.106 -1.151 -1.227 -0.044 D 97 95 3 98 3 0 6 117 206 -8.225 -0.262 -2.617 IL 98 98 3 98 3 1 8 119 208 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 33 - a - - - ML 99 98 3 101 3 1 9 117 206 -8.494 -0.014 -7.148 0.787 0.372 -1.502 -0.673 D 100 98 3 101 3 0 3 115 204 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 8 118 207 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 34 - U - - - ML 102 101 3 104 3 1 9 116 205 -8.494 -0.014 -7.148 -1.757 -1.133 -2.506 1.619 D 103 101 3 104 3 0 2 114 203 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 7 117 206 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 35 - C - - - ML 105 104 3 107 3 1 8 115 204 -8.494 -0.014 -7.148 -1.154 1.248 -1.417 -0.319 D 106 104 3 107 3 0 2 113 202 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 6 116 205 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 36 - U - - - ML 108 107 3 110 3 1 7 114 203 -8.494 -0.014 -7.148 -0.434 -0.659 -1.635 1.205 D 109 107 3 110 3 0 1 112 201 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 6 115 204 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - u - - - ML 111 110 3 113 3 1 7 113 202 -8.494 -0.014 -7.148 -0.204 -1.061 -0.004 0.727 D 112 110 3 113 3 0 0 111 199 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 5 114 203 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - g - - - ML 114 113 3 116 3 1 6 112 201 -8.494 -0.014 -7.148 0.406 -1.072 0.724 -0.869 D 115 113 3 116 3 0 0 110 198 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 4 113 202 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - A - - - ML 117 116 3 119 3 1 5 111 200 -2.949 -0.212 -7.148 1.411 -1.720 -0.915 -0.981 D 118 116 3 119 3 0 0 109 197 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 4 111 200 -1.952 -0.511 -4.653 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - u - - - ML 120 119 3 122 3 1 4 110 199 -8.494 -0.014 -7.148 0.326 -1.029 -0.958 0.801 D 121 119 3 122 3 0 0 107 196 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 3 111 199 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 42 - G - - - ML 123 122 3 125 3 1 3 109 198 -8.494 -0.014 -7.148 -0.903 -2.134 1.479 -1.150 D 124 122 3 125 3 0 0 106 195 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 2 110 198 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 43 - a - - - ML 126 125 3 128 3 1 2 108 197 -8.494 -0.014 -7.148 0.795 -0.538 -0.117 -0.613 D 127 125 3 128 3 0 0 105 194 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 2 109 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 44 - u - - - ML 129 128 3 131 3 1 1 107 196 -8.494 -0.099 -3.975 0.331 -0.619 -1.272 0.746 D 130 128 3 131 3 0 0 103 192 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 108 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - G - - - ML 132 131 3 134 3 1 3 106 195 -8.410 -0.015 -7.064 0.329 -1.985 1.083 -1.420 D 133 131 3 134 3 0 0 100 189 -6.985 -2.499 -0.295 IL 134 134 3 134 3 1 1 107 196 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - g - - - ML 135 134 3 137 3 1 3 105 194 -8.410 -0.015 -7.064 0.252 -0.744 0.519 -0.360 D 136 134 3 137 3 0 0 97 186 -6.985 -2.499 -0.295 IL 137 137 3 137 3 1 1 106 194 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 47 - u - - - ML 138 137 3 140 3 1 3 104 193 -1.560 -0.614 -7.064 0.237 -0.961 -0.472 0.666 D 139 137 3 140 3 0 0 85 174 -6.985 -2.499 -0.295 IL 140 140 3 140 3 1 3 109 197 -0.299 -2.465 -7.320 0.000 0.000 0.000 0.000 [ MATL 43 ] 61 - G - - - ML 141 140 3 143 3 1 2 54 84 -8.410 -0.015 -7.064 -1.388 -2.328 1.567 -1.131 D 142 140 3 143 3 0 0 53 82 -6.985 -0.720 -1.377 IL 143 143 3 143 3 1 1 55 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 62 - a - - - ML 144 143 3 146 3 1 2 53 83 -8.494 -0.014 -7.148 0.838 -0.696 -0.691 -0.036 D 145 143 3 146 3 0 0 51 81 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 54 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 63 - U - - - ML 147 146 3 149 3 1 1 52 82 -8.494 -0.014 -7.148 -0.626 -0.757 -1.760 1.302 D 148 146 3 149 3 0 0 50 80 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 53 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 64 - G - - - ML 150 149 3 152 3 1 1 51 81 -8.494 -0.014 -7.148 -2.647 -4.001 1.880 -3.374 D 151 149 3 152 3 0 0 49 79 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 52 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 65 - A - - - ML 153 152 3 155 3 1 1 50 80 -8.494 -0.014 -7.148 1.872 -3.434 -2.967 -3.085 D 154 152 3 155 3 0 0 48 78 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 51 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 66 - c - - - ML 156 155 3 158 3 1 1 49 79 -8.494 -0.014 -7.148 -0.753 0.629 -1.074 0.470 D 157 155 3 158 3 0 0 47 77 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 50 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 67 - a - - - ML 159 158 3 161 3 1 1 48 78 -3.890 -0.112 -7.148 0.990 -1.395 -0.089 -0.529 D 160 158 3 161 3 0 0 46 76 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 49 78 -1.725 -0.619 -4.425 0.000 0.000 0.000 0.000 [ MATL 50 ] 69 - a - - - ML 162 161 3 164 3 1 1 47 77 -8.494 -0.014 -7.148 0.344 0.060 -1.250 0.342 D 163 161 3 164 3 0 0 45 75 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 48 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 70 - U - - - ML 165 164 3 167 3 1 1 46 76 -8.494 -0.014 -7.148 -0.281 -1.306 -1.755 1.308 D 166 164 3 167 3 0 0 44 74 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 47 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 71 - u - - - ML 168 167 3 170 3 1 1 45 75 -8.494 -0.014 -7.148 -0.003 0.059 -1.340 0.647 D 169 167 3 170 3 0 0 43 73 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 46 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 72 - u - - - ML 171 170 3 173 3 1 1 44 74 -8.494 -0.108 -3.844 -0.282 -0.592 -0.640 0.905 D 172 170 3 173 3 0 0 42 71 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 45 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 73 - a - - - ML 174 173 3 176 3 1 1 43 73 -8.401 -0.076 -4.368 0.616 -0.990 -0.648 0.407 D 175 173 3 176 3 0 0 41 70 -7.050 -2.563 -0.281 IL 176 176 3 176 3 1 1 44 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 74 - A - - - ML 177 176 3 179 3 1 1 42 72 -2.180 -0.374 -6.995 1.132 -1.263 -1.364 0.004 D 178 176 3 179 3 0 0 40 69 -7.405 -0.502 -1.797 IL 179 179 3 179 3 1 1 43 72 -1.175 -0.909 -5.351 0.000 0.000 0.000 0.000 [ MATL 56 ] 77 - A - - - ML 180 179 3 182 3 1 1 40 70 -8.494 -0.014 -7.148 1.600 -1.383 -1.965 -1.608 D 181 179 3 182 3 0 0 38 68 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 41 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 78 - C - - - ML 183 182 3 185 3 1 1 39 68 -8.494 -0.014 -7.148 -1.457 1.250 -2.338 0.085 D 184 182 3 185 3 0 0 37 67 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 40 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 79 - C - - - ML 186 185 3 188 3 1 1 38 67 -8.494 -0.014 -7.148 -3.015 1.843 -3.820 -2.194 D 187 185 3 188 3 0 0 36 66 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 39 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 80 - A - - - ML 189 188 3 191 3 1 1 37 66 -8.494 -0.014 -7.148 1.872 -3.434 -2.967 -3.085 D 190 188 3 191 3 0 0 35 65 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 38 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 81 - C - - - ML 192 191 3 194 3 1 1 36 65 -8.494 -0.014 -7.148 -3.015 1.843 -3.820 -2.194 D 193 191 3 194 3 0 0 34 64 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 37 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 82 - C - - - ML 195 194 3 197 3 1 1 35 64 -8.494 -0.014 -7.148 -3.015 1.843 -3.820 -2.194 D 196 194 3 197 3 0 0 33 63 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 36 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 83 - A - - - ML 198 197 3 200 3 1 1 34 63 -8.494 -0.014 -7.148 1.872 -3.434 -2.967 -3.085 D 199 197 3 200 3 0 0 32 62 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 35 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 84 - A - - - ML 201 200 3 203 3 1 1 33 62 -8.494 -0.014 -7.148 1.373 -1.589 -1.653 -0.398 D 202 200 3 203 3 0 0 31 61 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 34 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 85 - G - - - ML 204 203 3 206 3 1 1 32 61 -8.494 -0.014 -7.148 -1.637 -2.630 1.654 -1.439 D 205 203 3 206 3 0 0 30 59 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 33 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 86 - A - - - ML 207 206 3 209 3 1 1 31 60 -8.494 -0.014 -7.148 1.872 -3.434 -2.967 -3.085 D 208 206 3 209 3 0 0 29 58 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 32 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 87 - U - - - ML 210 209 3 212 3 1 1 30 59 -8.494 -0.014 -7.148 -2.494 -2.323 -3.263 1.815 D 211 209 3 212 3 0 0 28 57 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 31 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 88 - C - - - ML 213 212 3 215 3 1 1 29 58 -2.949 -0.212 -7.148 -2.037 1.602 -2.908 -0.766 D 214 212 3 215 3 0 0 24 54 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 31 61 -0.901 -1.185 -5.327 0.000 0.000 0.000 0.000 [ MATL 68 ] 92 - g - - - ML 216 215 3 218 3 1 1 17 36 -8.494 -0.014 -7.148 0.025 -1.123 0.408 0.259 D 217 215 3 218 3 0 0 17 35 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 93 - C - - - ML 219 218 3 221 3 1 1 16 34 -8.494 -0.014 -7.148 -3.015 1.843 -3.820 -2.194 D 220 218 3 221 3 0 0 16 34 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 94 - U - - - ML 222 221 3 224 3 1 1 14 33 -8.494 -0.014 -7.148 -2.494 -2.323 -3.263 1.815 D 223 221 3 224 3 0 0 15 33 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 71 ] 95 - G - - - ML 225 224 3 227 3 1 1 13 31 -8.494 -0.014 -7.148 -2.647 -4.001 1.880 -3.374 D 226 224 3 227 3 0 0 13 32 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 72 ] 96 - A - - - ML 228 227 3 230 2 1 1 1 1 * 0.000 1.872 -3.434 -2.967 -3.085 D 229 227 3 230 2 0 0 0 0 * 0.000 IL 230 230 3 230 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 73 ] - - - - - - E 231 230 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD24 ACC RF00069 DESC Small nucleolar RNA SNORD24 LENG 76 MAXL 190 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:13:56 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 14 EFFN 4.111816 CKSUM 1628717476 STATS LOCAL MSV -8.3835 0.71866 STATS LOCAL VITERBI -9.3420 0.71866 STATS LOCAL FORWARD -3.3062 0.71866 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.19427 1.59386 1.52734 1.28438 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 0.00000 * 1 2.17068 1.65317 1.51500 0.74518 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 2 2.10997 2.52477 0.39204 2.09552 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 3 3.96228 0.11362 3.80693 2.71557 3 C - - < 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 4 0.91262 1.08485 2.11128 1.96974 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 5 0.79196 2.37621 1.28416 1.73015 5 a - - _ 1.38629 1.38629 1.38629 1.38629 0.17711 1.90411 4.31583 0.75621 0.63382 1.09861 0.40547 6 0.65673 2.41696 1.48733 1.79403 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 7 3.27674 3.13328 3.81345 0.10914 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 8 3.37600 4.33000 0.07028 3.88676 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.07182 2.88329 4.31583 0.42383 1.06287 1.09861 0.40547 9 0.07434 3.93197 3.59550 3.70528 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 10 3.27674 3.13328 3.81345 0.10914 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 11 3.37600 4.33000 0.07028 3.88676 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 12 1.35454 1.91749 2.40863 0.68316 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 13 0.58791 1.79265 1.95295 1.99405 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 14 0.07434 3.93197 3.59550 3.70528 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.27600 4.31583 1.47914 1.46634 0.26236 1.09861 0.40547 15 1.19200 1.81263 2.21350 0.85839 18 u - - _ 1.38629 1.38629 1.38629 1.38629 0.21686 1.72624 4.07443 0.18122 1.79729 1.68995 0.20399 16 0.54694 1.65472 2.39324 1.97472 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03315 4.11633 4.11633 1.46634 0.26236 1.01942 0.44755 17 0.69897 2.68422 1.09509 2.30136 21 a - - _ 1.38629 1.38629 1.38629 1.38629 0.11469 4.19422 2.37217 1.46634 0.26236 2.44874 0.09037 18 0.75518 1.59991 2.23876 1.50703 22 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07678 4.11280 2.85520 1.46634 0.26236 2.81889 0.06153 19 0.58340 1.97635 2.29000 1.59868 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03473 4.07075 4.07075 1.46634 0.26236 0.10955 2.26568 20 2.18852 2.57672 3.04151 0.26902 24 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 21 0.07434 3.93197 3.59550 3.70528 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 22 2.21847 1.97441 2.36371 0.41808 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 23 3.27674 3.13328 3.81345 0.10914 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06222 4.31583 3.05823 1.46634 0.26236 1.09861 0.40547 24 2.14318 2.53252 2.98640 0.28397 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02803 4.28164 4.28164 1.46634 0.26236 0.45023 1.01468 25 2.71674 3.43701 0.19080 2.58421 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 26 2.82848 0.23443 2.77900 2.43297 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 27 3.27674 3.13328 3.81345 0.10914 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.32687 4.31583 1.32627 1.46634 0.26236 1.09861 0.40547 28 0.59549 2.23132 2.28887 1.42737 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03637 4.02533 4.02533 1.46634 0.26236 0.09587 2.39229 29 0.82044 1.10369 2.50429 1.92153 33 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 30 2.72222 2.21940 3.24174 0.24016 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 31 2.27582 0.48660 2.41109 1.64581 35 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 32 1.71457 1.86843 2.58689 0.52706 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 33 1.54776 2.16652 1.37490 0.86789 37 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 34 1.10514 2.15796 0.85472 2.05673 38 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 35 0.38530 2.65139 2.04583 2.12088 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.17711 1.90411 4.31583 0.17058 1.85263 1.09861 0.40547 36 1.15478 2.14547 2.07384 0.81609 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 37 2.06864 2.95036 0.33687 2.23195 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 38 0.81941 1.76083 1.46085 1.86198 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 39 1.15023 1.83472 2.30871 0.85711 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09127 4.31583 2.60539 1.46634 0.26236 1.09861 0.40547 40 1.15729 2.85963 0.60829 2.47579 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02884 4.25341 4.25341 1.46634 0.26236 2.01908 0.14246 41 1.21769 1.91550 1.00033 1.66568 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02884 4.25341 4.25341 1.46634 0.26236 2.01908 0.14246 42 1.22047 2.09030 1.71535 0.91291 47 u - - _ 1.38629 1.38629 1.38629 1.38629 0.49408 0.97908 4.25341 2.01398 0.14324 2.01908 0.14246 43 2.45456 3.11429 0.27293 2.22063 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02884 4.25341 4.25341 1.46634 0.26236 0.30864 1.32593 44 0.78994 1.88341 1.87999 1.42103 62 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 45 1.85990 1.94310 2.68350 0.45771 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 46 3.37600 4.33000 0.07028 3.88676 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 47 0.07434 3.93197 3.59550 3.70528 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 48 1.96684 0.92165 2.15669 1.05978 66 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 49 0.68082 2.41066 1.44195 1.78631 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10087 2.49378 4.31583 0.29695 1.35900 1.09861 0.40547 50 1.14265 1.33151 2.29480 1.15148 69 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 51 1.60240 2.36990 2.68787 0.45087 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 52 1.39507 1.33329 2.36011 0.93098 71 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 53 1.60062 1.81321 1.83262 0.74422 72 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09839 4.31583 2.52140 1.46634 0.26236 1.09861 0.40547 54 0.94759 2.11067 1.84751 1.09799 73 a - - _ 1.38629 1.38629 1.38629 1.38629 0.07539 4.24649 2.84210 1.46634 0.26236 2.08145 0.13325 55 0.57699 2.31944 2.39293 1.39142 74 A - - _ 1.38629 1.38629 1.38629 1.38629 0.30746 1.38744 4.20151 0.73525 0.65274 0.19889 1.71282 56 0.25359 2.37740 2.85129 2.61143 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 57 2.50003 0.49000 3.12279 1.34225 78 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 58 3.66563 0.09091 4.20733 3.06981 79 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 59 0.07434 3.93197 3.59550 3.70528 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 60 3.66563 0.09091 4.20733 3.06981 81 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 61 3.66563 0.09091 4.20733 3.06981 82 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 62 0.07434 3.93197 3.59550 3.70528 83 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 63 0.40907 2.56358 2.61448 1.68472 84 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 64 2.63470 3.33073 0.21682 2.43710 85 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 65 0.07434 3.93197 3.59550 3.70528 86 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 66 3.27674 3.13328 3.81345 0.10914 87 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 67 2.93422 0.24978 3.54247 1.97389 88 C - - _ 1.38629 1.38629 1.38629 1.38629 0.17711 1.90411 4.31583 1.12311 0.39344 1.09861 0.40547 68 1.38015 2.20884 1.08137 1.20564 92 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 69 3.66563 0.09091 4.20733 3.06981 93 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 70 3.27674 3.13328 3.81345 0.10914 94 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 71 3.37600 4.33000 0.07028 3.88676 95 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 72 0.07434 3.93197 3.59550 3.70528 96 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09127 2.60539 4.31583 0.32913 1.27136 1.09861 0.40547 73 2.21962 2.30782 1.00692 0.85207 98 u - - > 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 74 3.00300 3.97395 0.09697 3.73054 99 G - - > 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 75 2.12270 0.46925 2.34254 1.84052 100 C - - > 1.38629 1.38629 1.38629 1.38629 0.02707 4.31583 4.31583 1.46634 0.26236 1.09861 0.40547 76 0.90270 1.63555 1.48375 1.75506 101 a - - > 1.38629 1.38629 1.38629 1.38629 0.01363 4.30239 * 1.46634 0.26236 0.00000 * //