INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD18 ACC RF00093 DESC Small nucleolar RNA SNORD18 STATES 223 NODES 71 CLEN 73 W 198 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:15:21 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 5.308594 CKSUM 2605803411 NULL 0.000 0.000 0.000 0.000 GA 41.00 TC 41.00 NC 40.90 EFP7GF -10.8189 0.71868 ECMLC 0.62681 -6.47017 2.45179 1600000 322057 0.003726 ECMGC 0.40598 -15.07012 -2.05632 1600000 78810 0.005075 ECMLI 0.55560 -5.73799 3.96990 1600000 264009 0.004545 ECMGI 0.41496 -10.88935 1.07495 1600000 57308 0.006980 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 198 349 -9.558 -9.497 -0.077 -8.273 -4.504 -8.948 IL 1 1 2 1 6 1 30 200 351 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 30 199 351 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 102 u a - - MP 3 2 3 7 6 4 33 199 350 -9.497 -9.436 -0.016 -8.212 -8.492 -8.887 -1.673 -1.878 -1.870 1.251 -1.855 -2.720 1.292 -1.197 -1.936 1.095 -1.479 -0.558 1.777 -0.873 0.119 -0.066 ML 4 2 3 7 6 1 27 196 348 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 28 197 348 -7.713 -6.442 -0.758 -6.420 -1.554 -4.634 -0.371 -0.611 -1.011 1.054 D 6 2 3 7 6 0 22 192 343 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 29 198 349 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 29 197 349 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 101 u a - - MP 9 8 6 13 6 4 32 197 348 -9.558 -9.497 -0.015 -8.273 -8.553 -8.948 -1.675 -1.043 -1.875 1.375 -1.151 -2.720 1.249 -1.018 -0.385 1.250 -1.654 -0.103 1.424 -2.013 -0.136 -0.669 ML 10 8 6 13 6 1 27 194 346 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 26 194 345 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 22 191 342 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 28 196 347 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 28 195 347 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 100 a u - - MP 15 14 6 19 6 4 30 195 346 -9.558 -9.497 -0.015 -8.273 -8.553 -8.948 -0.368 -1.476 -1.995 1.336 -1.993 -2.593 1.207 -2.269 -1.904 1.074 -1.309 0.826 1.125 -1.279 -0.224 0.211 ML 16 14 6 19 6 1 26 193 344 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 24 192 343 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 22 190 341 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 27 194 345 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 27 194 345 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 99 a u - - MP 21 20 6 25 4 2 29 193 344 -7.919 -8.126 -0.027 -6.540 -1.756 0.092 -1.974 1.513 -1.971 -2.750 1.391 -0.804 -2.000 1.177 -2.530 -0.407 1.076 -1.394 -0.211 0.188 ML 22 20 6 25 4 1 25 191 343 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 23 190 342 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 24 20 6 25 4 0 21 189 340 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 27 192 344 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 26 192 343 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 27 26 6 29 3 1 27 191 342 -8.883 -0.011 -7.538 0.696 -0.406 -1.398 0.318 D 28 26 6 29 3 0 21 188 339 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 25 191 342 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 30 29 3 32 3 1 26 190 341 -8.883 -0.011 -7.538 1.613 -2.712 -0.756 -2.343 D 31 29 3 32 3 0 20 187 338 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 25 190 341 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 25 189 340 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 34 32 3 35 3 0 19 186 337 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 24 189 340 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 25 188 339 -8.883 -0.011 -7.538 -3.300 -4.717 1.926 -4.042 D 37 35 3 38 3 0 19 185 336 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 23 188 339 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 24 187 338 -8.883 -0.011 -7.538 1.924 -4.147 -3.631 -3.853 D 40 38 3 41 3 0 18 184 335 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 22 187 338 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 23 186 337 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 43 41 3 44 3 0 17 183 334 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 22 186 337 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 45 44 3 47 3 1 22 185 336 -8.883 -0.011 -7.538 -3.300 -4.717 1.926 -4.042 D 46 44 3 47 3 0 17 182 333 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 21 185 336 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 48 47 3 50 3 1 21 184 335 -8.883 -0.011 -7.538 1.924 -4.147 -3.631 -3.853 D 49 47 3 50 3 0 16 181 332 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 20 184 335 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - u - - - ML 51 50 3 53 3 1 20 183 334 -8.883 -0.011 -7.538 0.173 -0.694 0.079 0.261 D 52 50 3 53 3 0 15 180 331 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 19 183 334 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - c - - - ML 54 53 3 56 3 1 20 182 333 -8.883 -0.011 -7.538 -0.189 0.533 -0.936 0.206 D 55 53 3 56 3 0 15 179 330 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 19 182 333 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 57 56 3 59 3 1 19 181 332 -2.722 -0.246 -7.538 -0.007 -1.543 -1.921 1.262 D 58 56 3 59 3 0 14 178 329 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 18 181 332 -2.170 -0.428 -4.870 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - C - - - ML 60 59 3 62 3 1 18 179 331 -8.883 -0.011 -7.538 -0.792 1.228 -2.261 -0.199 D 61 59 3 62 3 0 13 176 328 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 17 180 331 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - c - - - ML 63 62 3 65 3 1 17 178 330 -8.883 -0.107 -3.853 0.597 0.772 -1.944 -0.945 D 64 62 3 65 3 0 13 175 327 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 17 179 330 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 66 65 3 68 3 1 17 178 329 -8.788 -0.012 -7.442 1.757 -2.015 -2.537 -2.326 D 67 65 3 68 3 0 12 174 325 -7.255 -2.768 -0.240 IL 68 68 3 68 3 1 16 178 329 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - u - - - ML 69 68 3 71 3 1 16 177 328 -8.788 -0.012 -7.442 -0.829 0.585 -1.921 0.743 D 70 68 3 71 3 0 12 173 324 -7.255 -2.768 -0.240 IL 71 71 3 71 3 1 16 177 328 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 72 71 3 74 3 1 15 176 327 -8.788 -0.262 -2.609 -1.776 -0.379 -2.553 1.469 D 73 71 3 74 3 0 12 172 324 -7.255 -2.768 -0.240 IL 74 74 3 74 3 1 16 177 328 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 75 74 3 77 3 1 16 175 327 -8.540 -0.014 -7.194 -1.621 -0.726 -2.378 1.525 D 76 74 3 77 3 0 11 172 323 -8.408 -3.921 -0.103 IL 77 77 3 77 3 1 16 176 327 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - c - - - ML 78 77 3 80 3 1 15 174 326 -8.540 -0.014 -7.194 -0.669 0.673 -1.723 0.559 D 79 77 3 80 3 0 11 171 323 -8.408 -3.921 -0.103 IL 80 80 3 80 3 1 15 175 326 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - u - - - ML 81 80 3 83 3 1 14 173 325 -8.540 -0.274 -2.554 0.635 -1.163 -1.375 0.691 D 82 80 3 83 3 0 11 171 322 -8.408 -3.921 -0.103 IL 83 83 3 83 3 1 15 174 325 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - U - - - ML 84 83 3 86 3 1 14 173 324 -1.904 -0.465 -6.937 -0.053 -1.080 -1.465 1.138 D 85 83 3 86 3 0 11 171 322 -8.973 -0.151 -3.364 IL 86 86 3 86 3 1 13 172 324 -2.261 -0.397 -4.961 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - G - - - ML 87 86 3 89 3 1 14 171 323 -8.883 -0.011 -7.538 -1.381 -3.493 1.765 -2.963 D 88 86 3 89 3 0 7 169 320 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 12 172 323 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - G - - - ML 90 89 3 92 3 1 13 170 322 -8.883 -0.011 -7.538 -1.381 -3.493 1.765 -2.963 D 91 89 3 92 3 0 7 168 319 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 11 171 322 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - U - - - ML 93 92 3 95 3 1 13 169 321 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 94 92 3 95 3 0 7 167 318 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 11 170 321 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - C - - - ML 96 95 3 98 3 1 12 168 320 -8.883 -0.011 -7.538 -3.801 1.907 -4.519 -2.890 D 97 95 3 98 3 0 6 166 317 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 10 169 320 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - C - - - ML 99 98 3 101 3 1 11 167 319 -8.883 -0.011 -7.538 -3.801 1.907 -4.519 -2.890 D 100 98 3 101 3 0 6 165 316 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 9 168 319 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - G - - - ML 102 101 3 104 3 1 10 166 318 -8.883 -0.011 -7.538 -3.300 -4.717 1.926 -4.042 D 103 101 3 104 3 0 5 164 315 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 9 167 318 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - U - - - ML 105 104 3 107 3 1 9 165 317 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 106 104 3 107 3 0 5 163 314 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 8 166 317 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - G - - - ML 108 107 3 110 3 1 9 164 316 -8.883 -0.011 -7.538 -3.300 -4.717 1.926 -4.042 D 109 107 3 110 3 0 4 162 313 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 8 165 316 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 35 - U - - - ML 111 110 3 113 3 1 8 163 315 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 112 110 3 113 3 0 3 161 312 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 7 164 315 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 36 - U - - - ML 114 113 3 116 3 1 7 162 314 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 115 113 3 116 3 0 3 159 311 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 7 163 314 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 37 - U - - - ML 117 116 3 119 3 1 6 161 313 -8.883 -0.011 -7.538 -1.076 -1.926 -2.592 1.631 D 118 116 3 119 3 0 2 158 310 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 6 162 313 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 38 - C - - - ML 120 119 3 122 3 1 5 160 312 -8.883 -0.011 -7.538 -0.259 1.333 -2.446 -1.117 D 121 119 3 122 3 0 2 157 309 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 5 161 312 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 39 - U - - - ML 123 122 3 125 3 1 4 159 311 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 124 122 3 125 3 0 1 156 307 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 4 160 311 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 40 - G - - - ML 126 125 3 128 3 1 3 158 310 -8.883 -0.011 -7.538 -3.300 -4.717 1.926 -4.042 D 127 125 3 128 3 0 1 154 306 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 3 159 310 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 41 - A - - - ML 129 128 3 131 3 1 2 157 309 -1.976 -1.369 -1.480 1.924 -4.147 -3.631 -3.853 D 130 128 3 131 3 0 0 152 304 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 7 162 314 -0.277 -2.567 -7.459 0.000 0.000 0.000 0.000 [ MATL 40 ] 51 - a - - - ML 132 131 3 134 3 1 5 154 305 -8.255 -0.017 -6.909 0.889 -0.472 -1.163 -0.028 D 133 131 3 134 3 0 0 152 303 -9.017 -2.264 -0.340 IL 134 134 3 134 3 1 4 154 305 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 52 - A - - - ML 135 134 3 137 3 1 4 153 304 -8.398 -0.015 -7.053 1.180 -0.641 -1.399 -0.487 D 136 134 3 137 3 0 0 151 303 -8.757 -0.311 -2.383 IL 137 137 3 137 3 1 2 153 304 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 53 - A - - - ML 138 137 3 140 3 1 3 152 303 -8.844 -0.011 -7.498 1.108 -2.389 0.467 -1.884 D 139 137 3 140 3 0 0 149 301 -6.733 -0.911 -1.124 IL 140 140 3 140 3 1 1 152 303 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 54 - a - - - ML 141 140 3 143 3 1 3 151 302 -8.883 -0.011 -7.538 0.727 -0.046 -0.880 -0.264 D 142 140 3 143 3 0 0 148 299 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 151 302 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 55 - C - - - ML 144 143 3 146 3 1 3 150 301 -8.883 -0.011 -7.538 -2.053 1.778 -3.540 -2.041 D 145 143 3 146 3 0 0 147 298 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 150 301 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 56 - u - - - ML 147 146 3 149 3 1 2 149 300 -8.883 -0.011 -7.538 -0.128 0.221 -0.703 0.384 D 148 146 3 149 3 0 0 146 297 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 149 300 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 57 - C - - - ML 150 149 3 152 3 1 2 148 299 -8.883 -0.011 -7.538 -0.048 1.011 -1.959 -0.395 D 151 149 3 152 3 0 0 145 296 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 148 299 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 58 - a - - - ML 153 152 3 155 3 1 2 147 298 -4.771 -0.062 -7.538 0.788 -0.398 -0.497 -0.312 D 154 152 3 155 3 0 0 144 295 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 147 298 -1.645 -0.664 -4.345 0.000 0.000 0.000 0.000 [ MATL 48 ] 60 - U - - - ML 156 155 3 158 3 1 1 146 297 -8.883 -0.011 -7.538 -0.646 -0.151 -1.886 1.131 D 157 155 3 158 3 0 0 143 294 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 146 297 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 61 - G - - - ML 159 158 3 161 3 1 1 145 296 -8.883 -0.011 -7.538 -1.680 -1.328 1.614 -2.128 D 160 158 3 161 3 0 0 142 293 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 145 296 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 62 - A - - - ML 162 161 3 164 3 1 1 144 295 -8.883 -0.011 -7.538 1.336 -1.089 -0.734 -1.309 D 163 161 3 164 3 0 0 141 293 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 144 295 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 63 - U - - - ML 165 164 3 167 3 1 1 143 294 -8.883 -0.166 -3.229 -0.658 -0.203 -1.899 1.157 D 166 164 3 167 3 0 0 140 292 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 143 295 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 64 - a - - - ML 168 167 3 170 3 1 1 142 293 -8.729 -0.012 -7.383 0.952 -0.472 -0.760 -0.407 D 169 167 3 170 3 0 0 140 291 -7.645 -1.520 -0.630 IL 170 170 3 170 3 1 1 142 294 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 65 - U - - - ML 171 170 3 173 3 1 1 141 292 -8.788 -0.012 -7.442 -0.118 -1.496 -1.904 1.297 D 172 170 3 173 3 0 0 139 290 -7.255 -0.569 -1.647 IL 173 173 3 173 3 1 1 141 293 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 66 - u - - - ML 174 173 3 176 3 1 1 140 291 -8.883 -0.011 -7.538 -0.122 -0.343 0.107 0.282 D 175 173 3 176 3 0 0 137 288 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 140 292 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 67 - a - - - ML 177 176 3 179 3 1 1 139 290 -8.883 -0.011 -7.538 0.917 -0.942 -0.782 0.014 D 178 176 3 179 3 0 0 136 287 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 139 291 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 68 - g - - - ML 180 179 3 182 3 1 1 138 289 -8.883 -0.011 -7.538 0.029 -0.878 0.667 -0.239 D 181 179 3 182 3 0 0 134 286 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 138 290 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 69 - U - - - ML 183 182 3 185 3 1 1 137 288 -8.883 -0.011 -7.538 -0.371 -1.054 -1.917 1.311 D 184 182 3 185 3 0 0 133 284 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 137 288 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 70 - G - - - ML 186 185 3 188 3 1 1 136 287 -1.653 -0.564 -7.538 -1.260 -3.412 1.746 -2.887 D 187 185 3 188 3 0 0 131 282 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 136 287 -2.697 -0.283 -5.397 0.000 0.000 0.000 0.000 [ MATL 59 ] 72 - g - - - ML 189 188 3 191 3 1 1 135 286 -8.883 -0.011 -7.538 -0.488 -0.144 0.915 -1.011 D 190 188 3 191 3 0 0 128 280 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 135 286 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 73 - A - - - ML 192 191 3 194 3 1 1 134 285 -8.883 -0.011 -7.538 1.924 -4.147 -3.631 -3.853 D 193 191 3 194 3 0 0 124 275 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 133 285 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 74 - A - - - ML 195 194 3 197 3 1 1 133 284 -1.620 -1.662 -1.480 1.781 -2.814 -2.752 -1.871 D 196 194 3 197 3 0 0 106 257 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 141 292 -0.176 -3.165 -8.303 0.000 0.000 0.000 0.000 [ MATL 62 ] 91 - a - - - ML 198 197 3 200 3 1 1 21 39 -8.255 -0.017 -6.909 0.946 -0.637 -0.397 -0.576 D 199 197 3 200 3 0 0 19 38 -9.017 -0.146 -3.409 IL 200 200 3 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 92 - g - - - ML 201 200 3 203 3 1 1 19 38 -8.883 -0.011 -7.538 -0.108 -0.441 0.332 0.106 D 202 200 3 203 3 0 0 19 38 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 93 - U - - - ML 204 203 3 206 3 1 1 18 37 -8.883 -0.011 -7.538 -0.303 -1.304 -0.560 1.075 D 205 203 3 206 3 0 0 18 36 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 94 - U - - - ML 207 206 3 209 3 1 1 17 35 -8.883 -0.011 -7.538 -1.475 -1.726 -0.831 1.473 D 208 206 3 209 3 0 0 17 35 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 95 - C - - - ML 210 209 3 212 3 1 1 16 34 -8.883 -0.011 -7.538 -2.629 1.700 -3.509 -0.995 D 211 209 3 212 3 0 0 16 34 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 96 - U - - - ML 213 212 3 215 3 1 1 14 33 -8.883 -0.011 -7.538 -3.191 -2.920 -3.974 1.886 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 97 - G - - - ML 216 215 3 218 3 1 1 12 31 -8.883 -0.011 -7.538 -3.300 -4.717 1.926 -4.042 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 98 - A - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 1.924 -4.147 -3.631 -3.853 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD18 ACC RF00093 DESC Small nucleolar RNA SNORD18 LENG 73 MAXL 251 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:15:21 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 16 EFFN 5.894531 CKSUM 2605803411 STATS LOCAL MSV -8.1788 0.71868 STATS LOCAL VITERBI -9.5423 0.71868 STATS LOCAL FORWARD -3.7180 0.71868 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31907 1.64213 1.46446 1.17816 1.38629 1.38629 1.38629 1.38629 0.10159 4.55396 2.45258 1.46634 0.26236 0.00000 * 1 1.60392 1.58991 1.54458 0.96352 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.02303 4.47541 4.47541 1.46634 0.26236 0.21880 1.62702 2 1.47049 1.53735 1.28026 1.28276 2 g - - < 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 3 1.40044 1.71896 1.25011 1.24554 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 4 1.25730 1.49607 1.55357 1.27269 4 a - - < 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 5 0.89257 1.67225 2.39622 1.16632 5 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 6 0.25578 3.37097 1.91254 3.13218 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 7 3.72942 3.52542 4.27414 0.06975 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 8 3.79188 4.78607 0.04541 4.30560 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 9 0.04621 4.39464 4.03059 4.19643 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 10 3.72942 3.52542 4.27414 0.06975 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 11 3.79188 4.78607 0.04541 4.30560 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 12 0.04621 4.39464 4.03059 4.19643 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 13 1.26893 1.87992 1.32205 1.20504 13 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 14 1.53094 0.99921 2.04865 1.24970 14 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 15 1.39572 2.52992 2.79635 0.49160 15 U - - _ 1.38629 1.38629 1.38629 1.38629 0.19382 1.79778 4.55396 0.12256 2.15984 1.09861 0.40547 16 1.96580 0.51400 3.03451 1.54290 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 17 0.96138 0.82681 2.82073 2.11503 18 c - - _ 1.38629 1.38629 1.38629 1.38629 0.09133 4.55396 2.56707 1.46634 0.26236 1.09861 0.40547 18 0.15542 2.81838 3.23977 3.09948 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02280 4.48543 4.48543 1.46634 0.26236 2.22924 0.11385 19 2.00364 0.96089 2.78718 0.86510 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02280 4.48543 4.48543 1.46634 0.26236 2.22924 0.11385 20 2.71710 1.65487 3.25713 0.35053 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.20723 4.48543 1.73789 1.46634 0.26236 2.22924 0.11385 21 2.60236 1.91039 3.12833 0.30913 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02736 4.30556 4.30556 1.46634 0.26236 3.17376 0.04275 22 1.88688 0.89628 2.64100 0.99674 23 c - - _ 1.38629 1.38629 1.38629 1.38629 0.02736 4.30556 4.30556 1.46634 0.26236 3.17376 0.04275 23 0.93381 2.23988 2.38546 0.89544 24 u - - _ 1.38629 1.38629 1.38629 1.38629 0.22113 4.30556 1.68796 1.46634 0.26236 3.17376 0.04275 24 1.43297 2.18356 2.45329 0.57492 25 U - - _ 1.38629 1.38629 1.38629 1.38629 0.37428 1.21762 4.11754 0.10664 2.29115 0.05619 2.90690 25 2.37793 3.90510 0.15303 3.53983 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 26 2.37793 3.90510 0.15303 3.53983 28 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 27 3.72942 3.52542 4.27414 0.06975 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 28 4.15632 0.05663 4.63325 3.51760 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 29 4.15632 0.05663 4.63325 3.51760 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 30 3.79188 4.78607 0.04541 4.30560 32 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 31 3.72942 3.52542 4.27414 0.06975 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 32 3.79188 4.78607 0.04541 4.30560 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 33 3.72942 3.52542 4.27414 0.06975 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 34 3.72942 3.52542 4.27414 0.06975 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 35 2.16653 2.80748 3.28139 0.23890 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 36 1.57900 0.43601 3.19047 2.24377 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 37 3.72942 3.52542 4.27414 0.06975 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 38 3.79188 4.78607 0.04541 4.30560 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 39 0.04621 4.39464 4.03059 4.19643 41 A - - _ 1.38629 1.38629 1.38629 1.38629 1.04805 1.30113 0.97510 2.08099 0.13331 1.09861 0.40547 40 0.75361 1.71861 2.22777 1.41779 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03380 4.09726 4.09726 1.46634 0.26236 1.59551 0.22666 41 0.54714 1.83921 2.40941 1.75685 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03038 4.20242 4.20242 1.46634 0.26236 0.16226 1.89856 42 0.60274 3.15685 1.04863 2.81821 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02190 4.52548 4.52548 1.46634 0.26236 0.43526 1.04156 43 0.87279 1.40826 2.01262 1.58958 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 44 2.86959 0.13933 3.95361 2.91597 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 45 1.48642 1.22096 1.87902 1.12046 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 46 1.42717 0.66190 2.81772 1.69063 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 47 0.82963 1.66039 1.73496 1.62293 58 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05856 3.07142 4.55396 0.40512 1.09930 1.09861 0.40547 48 1.86313 1.48854 2.75761 0.58758 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 49 2.64428 2.31090 0.25066 2.96651 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 50 0.44153 2.15965 1.90749 2.37373 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 51 1.87138 1.52678 2.76752 0.56909 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.13491 4.55396 2.15694 1.46634 0.26236 1.09861 0.40547 52 0.71258 1.71405 1.92708 1.69330 64 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02381 4.44286 4.44286 1.46634 0.26236 1.01718 0.44881 53 1.47610 2.49571 2.78270 0.46655 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02280 4.48543 4.48543 1.46634 0.26236 0.24235 1.53610 54 1.48439 1.62390 1.30027 1.19148 66 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 55 0.73811 2.06108 1.94141 1.38164 67 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 56 1.37488 2.01090 0.90469 1.56736 68 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 57 1.65868 2.15368 2.78324 0.45932 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 58 2.29142 3.84776 0.16612 3.48644 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.42922 1.08336 4.55396 0.06108 2.82602 1.09861 0.40547 59 1.76194 1.47526 0.72527 2.15957 72 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 60 0.04621 4.39464 4.03059 4.19643 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 61 0.14062 3.42670 3.39427 2.73146 74 A - - _ 1.38629 1.38629 1.38629 1.38629 1.28466 1.06102 0.97510 2.46503 0.08884 1.09861 0.40547 62 0.71413 1.83369 1.66603 1.82287 91 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03380 4.09726 4.09726 1.46634 0.26236 0.05431 2.94003 63 1.47414 1.69362 1.14114 1.31782 92 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 64 1.61412 2.34066 1.77628 0.62473 93 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 65 2.50646 2.66640 1.96783 0.34364 94 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 66 3.32197 0.19416 3.93024 2.11400 95 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 67 3.72942 3.52542 4.27414 0.06975 96 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 68 3.79188 4.78607 0.04541 4.30560 97 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 69 0.04621 4.39464 4.03059 4.19643 98 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 70 1.71845 1.41465 1.42376 1.08816 99 u - - > 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 71 1.52589 1.66657 1.45053 1.02378 100 u - - > 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 72 1.32411 1.58696 1.43826 1.23075 101 u - - > 1.38629 1.38629 1.38629 1.38629 0.02128 4.55396 4.55396 1.46634 0.26236 1.09861 0.40547 73 1.32596 1.64815 1.38392 1.23288 102 u - - > 1.38629 1.38629 1.38629 1.38629 0.01069 4.54338 * 1.46634 0.26236 0.00000 * //