INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD42 ACC RF00150 DESC Small nucleolar RNA SNORD42 STATES 208 NODES 65 CLEN 68 W 103 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:18:25 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 7 EFFN 2.765137 CKSUM 4156306611 NULL 0.000 0.000 0.000 0.000 GA 39.00 TC 39.20 NC 38.60 EFP7GF -9.5301 0.71882 ECMLC 0.59253 -6.19806 3.10737 1600000 297697 0.004031 ECMGC 0.38980 -16.33671 -1.77305 1600000 116827 0.003424 ECMLI 0.51828 -4.87439 5.21188 1600000 223587 0.005367 ECMGI 0.43628 -9.98785 2.26100 1600000 83730 0.004777 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 103 146 -9.233 -9.172 -0.211 -7.948 -8.228 -2.999 IL 1 1 2 1 6 1 22 104 147 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 22 104 147 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 78 g c - - MP 3 2 3 7 6 2 24 103 146 -9.044 -8.983 -0.022 -7.760 -8.039 -8.434 -3.392 -2.611 -3.386 0.955 -3.260 -4.046 1.135 -3.543 -3.447 2.823 -3.867 -0.365 1.267 -3.432 -0.864 -2.326 ML 4 2 3 7 6 1 18 101 144 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 18 101 144 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 16 100 143 -10.755 -9.454 -0.474 -5.933 -5.950 -2.026 IL 7 7 5 7 6 1 20 102 145 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 20 102 145 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 77 u a - - MP 9 8 6 13 6 2 23 101 144 -9.233 -9.172 -0.019 -7.948 -8.228 -8.623 0.024 -1.755 -1.832 1.099 -1.801 -2.648 1.429 -2.156 -1.877 0.996 -0.239 -0.378 1.582 -1.963 -0.026 -0.350 ML 10 8 6 13 6 1 18 99 142 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 17 99 142 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 13 95 139 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 19 100 143 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 19 100 143 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 76 G C - - MP 15 14 6 19 6 2 21 99 142 -9.233 -9.172 -0.019 -7.948 -8.228 -8.623 -4.062 -2.748 -4.097 0.772 -4.940 -4.794 -0.341 -4.435 -3.986 3.097 -4.408 1.770 -0.606 -4.160 -2.316 -2.954 ML 16 14 6 19 6 1 17 97 140 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 16 97 140 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 13 94 137 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 18 98 141 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 18 98 141 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 75 C G - - MP 21 20 6 25 6 2 19 97 140 -9.233 -9.172 -0.086 -4.366 -8.228 -8.623 -4.284 -4.261 -4.218 -0.759 -3.342 -4.800 3.563 -4.058 -4.272 -0.590 -0.709 -2.402 0.165 -4.489 -1.166 -3.232 ML 22 20 6 25 6 1 16 96 139 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 15 95 138 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 12 93 136 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 17 96 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 17 96 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 74 a u - - MP 27 26 6 31 4 2 18 95 138 -7.099 -7.306 -0.048 -5.720 -3.143 -2.756 -3.200 2.284 -2.848 -4.049 1.381 -3.232 -3.209 1.270 -3.707 -0.593 1.849 -3.403 -0.581 -2.156 ML 28 26 6 31 4 1 16 95 138 -1.417 -4.506 -1.073 -3.236 -0.271 0.754 -0.993 -0.025 MR 29 26 6 31 4 1 13 93 136 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 12 92 135 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 17 94 138 -2.324 -3.007 -0.613 -5.492 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 16 95 138 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - u - - - ML 33 32 6 35 3 1 16 93 136 -8.252 -0.017 -6.906 0.448 -0.984 -1.234 0.770 D 34 32 6 35 3 0 11 91 134 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 15 94 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - A - - - ML 36 35 3 38 3 1 15 92 135 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 37 35 3 38 3 0 11 90 133 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 15 93 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - U - - - ML 39 38 3 41 3 1 14 91 134 -8.252 -0.017 -6.906 -0.420 -1.166 -1.651 1.315 D 40 38 3 41 3 0 10 89 132 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 14 92 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - G - - - ML 42 41 3 44 3 1 13 90 133 -8.252 -0.017 -6.906 -0.411 -2.230 1.443 -1.661 D 43 41 3 44 3 0 9 88 131 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 13 91 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - A - - - ML 45 44 3 47 3 1 12 89 132 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 46 44 3 47 3 0 9 87 130 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 12 90 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - U - - - ML 48 47 3 50 3 1 11 88 131 -8.252 -0.017 -6.906 -2.031 -1.934 -2.787 1.744 D 49 47 3 50 3 0 8 86 129 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 11 89 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - G - - - ML 51 50 3 53 3 1 11 87 130 -8.252 -0.017 -6.906 -2.181 -3.484 1.829 -2.869 D 52 50 3 53 3 0 8 85 128 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 11 88 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - G - - - ML 54 53 3 56 3 1 10 86 129 -8.252 -0.017 -6.906 -2.181 -3.484 1.829 -2.869 D 55 53 3 56 3 0 7 84 127 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 10 87 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - A - - - ML 57 56 3 59 3 1 9 85 128 -8.252 -0.427 -1.982 1.819 -2.954 -2.529 -2.556 D 58 56 3 59 3 0 7 83 127 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 9 86 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - A - - - ML 60 59 3 62 3 1 8 84 127 -7.847 -0.022 -6.501 1.663 -2.135 -1.791 -1.656 D 61 59 3 62 3 0 6 83 126 -8.086 -0.292 -2.477 IL 62 62 3 62 3 1 8 85 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - A - - - ML 63 62 3 65 3 1 7 83 126 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 64 62 3 65 3 0 4 81 124 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 84 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 66 65 3 68 3 1 6 82 125 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 67 65 3 68 3 0 4 80 123 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 6 83 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 69 68 3 71 3 1 5 81 124 -8.252 -0.457 -1.899 1.819 -2.954 -2.529 -2.556 D 70 68 3 71 3 0 3 79 122 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 8 82 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 72 71 3 74 3 1 9 81 124 -7.818 -0.023 -6.472 1.158 -1.352 -0.317 -0.800 D 73 71 3 74 3 0 3 77 120 -8.149 -3.662 -0.124 IL 74 74 3 74 3 1 7 81 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 75 74 3 77 3 1 9 80 123 -7.818 -0.023 -6.472 -1.220 -1.264 -1.938 1.533 D 76 74 3 77 3 0 3 77 120 -8.149 -1.655 -0.559 IL 77 77 3 77 3 1 7 80 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - c - - - ML 78 77 3 80 3 1 9 79 122 -7.971 -0.021 -6.625 -0.737 0.670 -1.528 0.548 D 79 77 3 80 3 0 2 75 118 -7.756 -3.269 -0.165 IL 80 80 3 80 3 1 7 79 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 81 80 3 83 3 1 8 78 121 -7.971 -0.021 -6.625 -1.499 -1.493 -2.233 1.622 D 82 80 3 83 3 0 2 74 117 -7.756 -3.269 -0.165 IL 83 83 3 83 3 1 6 78 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - u - - - ML 84 83 3 86 3 1 8 77 120 -7.971 -0.021 -6.625 0.138 -0.304 -0.436 0.433 D 85 83 3 86 3 0 2 73 116 -7.756 -3.269 -0.165 IL 86 86 3 86 3 1 6 77 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 87 86 3 89 3 1 8 76 119 -7.971 -0.021 -6.625 1.722 -2.386 -2.016 -1.929 D 88 86 3 89 3 0 1 72 115 -7.756 -3.269 -0.165 IL 89 89 3 89 3 1 6 76 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - A - - - ML 90 89 3 92 3 1 7 75 118 -3.317 -0.169 -6.625 1.722 -2.386 -2.016 -1.929 D 91 89 3 92 3 0 1 71 114 -7.756 -3.269 -0.165 IL 92 92 3 92 3 1 6 75 118 -1.734 -0.614 -4.434 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - U - - - ML 93 92 3 95 3 1 7 73 117 -7.971 -0.021 -6.625 -0.081 -0.887 -1.273 1.070 D 94 92 3 95 3 0 1 71 114 -7.756 -3.269 -0.165 IL 95 95 3 95 3 1 5 74 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - c - - - ML 96 95 3 98 3 1 6 72 116 -7.971 -0.021 -6.625 -0.369 0.445 -0.556 0.243 D 97 95 3 98 3 0 1 70 113 -7.756 -3.269 -0.165 IL 98 98 3 98 3 1 5 73 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - U - - - ML 99 98 3 101 3 1 5 71 115 -7.971 -0.021 -6.625 -1.499 -1.493 -2.233 1.622 D 100 98 3 101 3 0 1 70 113 -7.756 -0.378 -2.148 IL 101 101 3 101 3 1 4 72 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - u - - - ML 102 101 3 104 3 1 5 70 114 -8.252 -0.017 -6.906 -0.195 -0.102 -1.313 0.841 D 103 101 3 104 3 0 0 68 111 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 71 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - C - - - ML 105 104 3 107 3 1 4 69 113 -2.475 -0.301 -6.906 -1.473 1.406 -2.329 -0.338 D 106 104 3 107 3 0 0 66 109 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 70 113 -2.027 -0.480 -4.727 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - U - - - ML 108 107 3 110 3 1 4 68 111 -1.854 -0.484 -6.906 -0.914 -1.178 -0.965 1.331 D 109 107 3 110 3 0 0 60 103 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 70 113 -0.615 -1.585 -6.160 0.000 0.000 0.000 0.000 [ MATL 32 ] 40 - G - - - ML 111 110 3 113 3 1 3 49 70 -8.252 -0.017 -6.906 -2.181 -3.484 1.829 -2.869 D 112 110 3 113 3 0 0 47 68 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 50 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 41 - A - - - ML 114 113 3 116 3 1 3 48 69 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 115 113 3 116 3 0 0 46 67 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 49 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 42 - a - - - ML 117 116 3 119 3 1 2 47 68 -8.252 -0.017 -6.906 0.563 -0.267 -0.106 -0.391 D 118 116 3 119 3 0 0 45 66 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 48 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 43 - A - - - ML 120 119 3 122 3 1 2 46 67 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 121 119 3 122 3 0 0 44 65 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 47 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 44 - a - - - ML 123 122 3 125 3 1 1 45 66 -8.252 -0.165 -3.251 0.894 0.083 -1.301 -0.564 D 124 122 3 125 3 0 0 43 64 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 46 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 45 - g - - - ML 126 125 3 128 3 1 1 44 65 -8.105 -0.019 -6.759 -0.320 -0.486 0.331 0.295 D 127 125 3 128 3 0 0 42 63 -7.238 -0.577 -1.630 IL 128 128 3 128 3 1 1 45 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 46 - u - - - ML 129 128 3 131 3 1 1 43 64 -8.252 -0.017 -6.906 0.448 -0.984 -1.234 0.770 D 130 128 3 131 3 0 0 41 62 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 44 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 47 - g - - - ML 132 131 3 134 3 1 1 42 63 -8.252 -0.017 -6.906 0.614 -1.703 0.769 -1.125 D 133 131 3 134 3 0 0 40 61 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 43 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 48 - U - - - ML 135 134 3 137 3 1 1 41 61 -8.252 -0.017 -6.906 -2.031 -1.934 -2.787 1.744 D 136 134 3 137 3 0 0 39 60 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 42 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 49 - G - - - ML 138 137 3 140 3 1 1 40 60 -8.252 -0.017 -6.906 -2.181 -3.484 1.829 -2.869 D 139 137 3 140 3 0 0 38 59 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 41 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 50 - A - - - ML 141 140 3 143 3 1 1 39 59 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 142 140 3 143 3 0 0 37 58 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 40 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 51 - u - - - ML 144 143 3 146 3 1 1 38 58 -8.252 -0.017 -6.906 -0.953 0.403 -1.749 0.898 D 145 143 3 146 3 0 0 36 57 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 39 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 52 - g - - - ML 147 146 3 149 3 1 1 36 57 -8.252 -0.017 -6.906 0.614 -1.703 0.769 -1.125 D 148 146 3 149 3 0 0 35 56 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 38 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 53 - U - - - ML 150 149 3 152 3 1 1 35 56 -8.252 -0.017 -6.906 -1.259 -0.624 -2.010 1.425 D 151 149 3 152 3 0 0 34 55 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 37 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 54 - c - - - ML 153 152 3 155 3 1 1 34 55 -8.252 -0.017 -6.906 -0.708 0.899 -0.283 -0.512 D 154 152 3 155 3 0 0 33 54 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 36 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 55 - a - - - ML 156 155 3 158 3 1 1 33 54 -8.252 -0.017 -6.906 0.815 -1.043 -1.205 0.402 D 157 155 3 158 3 0 0 32 53 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 35 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 56 - u - - - ML 159 158 3 161 3 1 1 32 53 -8.252 -0.017 -6.906 0.448 -0.984 -1.234 0.770 D 160 158 3 161 3 0 0 31 52 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 34 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 57 - C - - - ML 162 161 3 164 3 1 1 31 52 -8.252 -0.017 -6.906 -2.446 1.770 -3.276 -1.722 D 163 161 3 164 3 0 0 30 51 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 33 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 58 - A - - - ML 165 164 3 167 3 1 1 30 51 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 166 164 3 167 3 0 0 29 50 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 32 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 59 - A - - - ML 168 167 3 170 3 1 1 29 50 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 169 167 3 170 3 0 0 28 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 31 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 60 - A - - - ML 171 170 3 173 3 1 1 28 49 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 172 170 3 173 3 0 0 27 48 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 30 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 61 - G - - - ML 174 173 3 176 3 1 1 27 48 -8.252 -0.017 -6.906 -2.181 -3.484 1.829 -2.869 D 175 173 3 176 3 0 0 26 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 29 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 62 - G - - - ML 177 176 3 179 3 1 1 26 47 -8.252 -0.017 -6.906 -2.181 -3.484 1.829 -2.869 D 178 176 3 179 3 0 0 25 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 28 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 63 - A - - - ML 180 179 3 182 3 1 1 25 46 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 181 179 3 182 3 0 0 24 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 27 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 64 - A - - - ML 183 182 3 185 3 1 1 24 45 -8.252 -0.017 -6.906 1.819 -2.954 -2.529 -2.556 D 184 182 3 185 3 0 0 23 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 26 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 65 - C - - - ML 186 185 3 188 3 1 1 23 44 -8.252 -0.017 -6.906 -2.446 1.770 -3.276 -1.722 D 187 185 3 188 3 0 0 22 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 25 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 66 - C - - - ML 189 188 3 191 3 1 1 22 43 -8.252 -0.165 -3.251 -2.446 1.770 -3.276 -1.722 D 190 188 3 191 3 0 0 21 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 24 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 67 - A - - - ML 192 191 3 194 3 1 1 21 42 -8.105 -0.019 -6.759 1.774 -2.657 -2.261 -2.228 D 193 191 3 194 3 0 0 20 41 -7.238 -0.577 -1.630 IL 194 194 3 194 3 1 1 23 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 68 - C - - - ML 195 194 3 197 3 1 1 20 41 -8.252 -0.017 -6.906 -2.446 1.770 -3.276 -1.722 D 196 194 3 197 3 0 0 18 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 22 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 69 - U - - - ML 198 197 3 200 3 1 1 19 40 -3.447 -0.152 -6.906 -2.031 -1.934 -2.787 1.744 D 199 197 3 200 3 0 0 16 37 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 21 41 -1.279 -0.862 -4.728 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - G - - - ML 201 200 3 203 3 1 1 13 31 -8.252 -0.017 -6.906 0.250 -1.846 1.083 -1.270 D 202 200 3 203 3 0 0 13 32 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - A - - - ML 204 203 3 206 2 1 1 1 1 * 0.000 1.819 -2.954 -2.529 -2.556 D 205 203 3 206 2 0 0 0 0 * 0.000 IL 206 206 3 206 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 207 206 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD42 ACC RF00150 DESC Small nucleolar RNA SNORD42 LENG 68 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:18:25 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 7 EFFN 3.141113 CKSUM 4156306611 STATS LOCAL MSV -8.0232 0.71882 STATS LOCAL VITERBI -9.0713 0.71882 STATS LOCAL FORWARD -3.3100 0.71882 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.00645 1.69025 1.51658 1.46728 1.38629 1.38629 1.38629 1.38629 0.38419 4.11867 1.19491 1.46634 0.26236 0.00000 * 1 1.95857 1.92386 0.66975 1.60415 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.04667 3.78115 3.78115 1.46634 0.26236 0.10207 2.33268 2 1.44504 1.57845 1.41685 1.15362 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 3 2.13511 2.96107 0.26210 2.80393 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 4 3.12208 0.27297 2.37012 2.28920 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 5 1.09209 1.66284 1.67541 1.24599 5 a - - < 1.38629 1.38629 1.38629 1.38629 0.14669 2.11881 4.11867 0.25170 1.50275 1.09861 0.40547 6 1.06725 2.11450 2.28707 0.83520 7 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 7 0.10642 3.59008 3.28125 3.33048 8 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 8 1.71019 2.26361 2.60892 0.44382 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 9 1.70605 3.03265 0.35766 2.64622 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 10 0.10642 3.59008 3.28125 3.33048 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 11 2.94403 2.85243 3.47278 0.15244 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 12 3.05168 3.97287 0.09982 3.54396 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 13 3.05168 3.97287 0.09982 3.54396 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 14 0.10642 3.59008 3.28125 3.33048 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.35046 4.11867 1.27521 1.46634 0.26236 1.09861 0.40547 15 0.20371 2.98975 2.73869 2.66866 16 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04515 3.81336 3.81336 1.46634 0.26236 0.11015 2.26047 16 0.10642 3.59008 3.28125 3.33048 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 17 0.10642 3.59008 3.28125 3.33048 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 18 0.10642 3.59008 3.28125 3.33048 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.37358 4.11867 1.21920 1.46634 0.26236 1.09861 0.40547 19 0.55894 2.37814 1.60877 2.00005 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04618 3.79128 3.79128 1.46634 0.26236 3.00392 0.05086 20 2.34006 2.35103 2.84451 0.28736 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04618 3.79128 3.79128 1.46634 0.26236 1.13334 0.38854 21 1.95513 0.89057 2.51104 1.00281 22 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 2.68597 0.07059 22 2.55094 2.52500 3.06586 0.22901 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 2.68597 0.07059 23 1.29252 1.59780 1.68797 1.08415 24 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 2.68597 0.07059 24 0.16596 3.17613 2.90643 2.87351 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 2.68597 0.07059 25 0.16596 3.17613 2.90643 2.87351 26 A - - _ 1.38629 1.38629 1.38629 1.38629 0.15713 2.07683 3.90812 0.29442 1.36634 2.68597 0.07059 26 1.45877 2.04597 2.32019 0.61624 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 2.68597 0.07059 27 1.67494 1.05079 1.77622 1.22505 29 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 2.68597 0.07059 28 2.55094 2.52500 3.06586 0.22901 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04099 3.90812 3.90812 1.46634 0.26236 0.14654 1.99282 29 1.53700 1.45053 2.33999 0.78922 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 30 2.51867 0.37774 3.12058 1.66129 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.25154 1.57924 4.11867 0.15097 1.96518 1.09861 0.40547 31 2.09968 2.27418 2.08375 0.43054 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.39498 1.17106 4.11867 1.37411 0.29178 1.09861 0.40547 32 3.05168 3.97287 0.09982 3.54396 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 33 0.10642 3.59008 3.28125 3.33048 41 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 34 0.98730 1.56406 1.45211 1.69251 42 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 35 0.10642 3.59008 3.28125 3.33048 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 36 0.74321 1.31200 2.34920 1.83453 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.14669 4.11867 2.11881 1.46634 0.26236 1.09861 0.40547 37 1.63890 1.73016 1.13100 1.18470 45 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03698 4.00896 4.00896 1.46634 0.26236 0.23957 1.54629 38 1.06725 2.11450 2.28707 0.83520 46 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 39 0.94898 2.64999 0.82718 2.25444 47 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 40 2.94403 2.85243 3.47278 0.15244 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 41 3.05168 3.97287 0.09982 3.54396 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 42 0.10642 3.59008 3.28125 3.33048 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 43 2.11979 1.08463 2.67818 0.74818 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 44 0.94898 2.64999 0.82718 2.25444 52 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 45 2.35403 1.84513 2.87645 0.37008 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 46 1.95151 0.71874 1.58048 1.80364 54 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 47 0.80282 2.15425 2.26743 1.10152 55 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 48 1.06725 2.11450 2.28707 0.83520 56 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 49 3.26916 0.13303 3.83844 2.73343 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 50 0.10642 3.59008 3.28125 3.33048 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 51 0.10642 3.59008 3.28125 3.33048 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 52 0.10642 3.59008 3.28125 3.33048 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 53 3.05168 3.97287 0.09982 3.54396 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 54 3.05168 3.97287 0.09982 3.54396 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 55 0.10642 3.59008 3.28125 3.33048 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 56 0.10642 3.59008 3.28125 3.33048 64 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 57 3.26916 0.13303 3.83844 2.73343 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 58 3.26916 0.13303 3.83844 2.73343 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.14669 4.11867 2.11881 1.46634 0.26236 1.09861 0.40547 59 0.13378 3.37540 3.08632 3.09342 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03698 4.00896 4.00896 1.46634 0.26236 0.23957 1.54629 60 3.26916 0.13303 3.83844 2.73343 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 61 2.94403 2.85243 3.47278 0.15244 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.13647 2.19549 4.11867 0.79629 0.59965 1.09861 0.40547 62 1.21619 2.75235 0.60628 2.35927 72 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 63 0.10642 3.59008 3.28125 3.33048 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.14669 4.11867 2.11881 1.46634 0.26236 1.09861 0.40547 64 1.36966 1.83793 1.57771 0.96703 74 u - - > 1.38629 1.38629 1.38629 1.38629 0.03698 4.00896 4.00896 1.46634 0.26236 0.23957 1.54629 65 2.53915 3.10168 0.19632 2.91241 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 66 3.03236 0.59256 2.77132 1.08973 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.03307 4.11867 4.11867 1.46634 0.26236 1.09861 0.40547 67 1.23090 1.80054 1.20371 1.41601 77 g - - > 1.38629 1.38629 1.38629 1.38629 0.38419 4.11867 1.19491 1.46634 0.26236 1.09861 0.40547 68 1.78142 0.74646 1.75078 1.69324 78 c - - > 1.38629 1.38629 1.38629 1.38629 0.02360 3.75809 * 1.46634 0.26236 0.00000 * //