INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD113 ACC RF00181 DESC Small nucleolar RNA SNORD113/SNORD114 family STATES 229 NODES 72 CLEN 75 W 178 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:23:09 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 59 EFFN 9.315979 CKSUM 823253948 NULL 0.000 0.000 0.000 0.000 GA 36.00 TC 36.00 NC 35.90 EFP7GF -12.3635 0.71868 ECMLC 0.64608 -5.70987 3.21223 1600000 382510 0.003137 ECMGC 0.36761 -18.65720 -3.78769 1600000 94621 0.004227 ECMLI 0.60854 -4.00500 4.77592 1600000 251093 0.004779 ECMGI 0.39968 -13.69947 -0.69710 1600000 72278 0.005534 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 178 306 -8.579 -8.786 -0.051 -5.081 IL 1 1 2 1 4 1 34 180 308 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 33 180 308 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 1 34 178 307 -9.819 -0.007 -8.137 -1.002 -1.728 -2.167 1.573 D 4 2 3 5 3 0 27 176 305 -6.072 -0.497 -1.855 IL 5 5 3 5 3 1 31 178 307 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 109 - a - - MR 6 5 3 8 3 1 33 177 306 -9.851 -0.007 -8.168 0.419 -0.214 -1.036 0.393 D 7 5 3 8 3 0 24 175 303 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 30 177 306 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 108 - A - - MR 9 8 3 11 5 1 33 176 305 -8.526 -0.014 -8.342 -8.554 -9.446 1.572 -2.980 -0.541 -2.236 D 10 8 3 11 5 0 23 174 302 -5.352 -0.707 -2.978 -4.409 -2.404 IR 11 11 3 11 5 1 28 176 304 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 107 G C - - MP 12 11 3 16 6 2 32 175 304 -9.956 -9.895 -0.012 -8.672 -8.951 -9.346 -1.714 -1.037 -3.478 0.720 -3.971 -4.183 0.056 -3.999 -0.058 3.037 -4.137 0.328 -0.155 -1.862 -1.705 -1.789 ML 13 11 3 16 6 1 25 173 301 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 25 172 301 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 20 168 296 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 27 174 303 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 27 174 302 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 106 G C - - MP 18 17 6 22 6 2 31 173 302 -9.956 -9.895 -0.023 -6.614 -8.951 -9.346 -4.275 -2.958 -4.119 0.986 -1.301 -4.700 -0.294 -4.772 -4.504 3.366 -4.771 -0.158 -0.563 -2.348 -2.290 -3.091 ML 19 17 6 22 6 1 25 171 299 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 24 170 299 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 19 166 295 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 26 172 301 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 27 172 301 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 105 A U - - MP 24 23 6 28 6 2 30 171 300 -9.945 -9.884 -0.012 -8.660 -8.940 -9.335 -2.556 -4.570 -5.175 3.771 -6.464 -7.100 -2.463 -5.271 -5.508 -0.767 -6.081 -0.201 -2.612 -3.055 -4.222 -4.278 ML 25 23 6 28 6 1 24 169 298 -6.496 -6.842 -1.010 -1.251 -6.692 -4.221 0.770 -0.664 -0.381 -0.158 MR 26 23 6 28 6 1 23 169 297 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 19 165 294 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 26 170 299 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 26 170 299 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 104 c g - - MP 30 29 6 34 6 2 28 169 298 -9.956 -9.895 -0.012 -8.672 -8.951 -9.346 -2.790 -1.833 -1.545 0.383 -2.650 -3.798 2.304 -3.102 -2.977 0.744 -3.536 -1.249 1.208 -3.099 1.837 -1.579 ML 31 29 6 34 6 1 23 167 296 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 21 167 295 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 18 164 293 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 25 168 297 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 24 168 297 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 103 c g - - MP 36 35 6 40 4 2 26 167 296 -8.579 -8.786 -0.017 -7.200 -2.608 -2.760 -1.948 0.391 -1.368 -3.619 2.728 -0.788 -2.819 0.341 -2.191 -1.227 1.029 -2.927 0.968 -1.943 ML 37 35 6 40 4 1 22 166 295 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 4 1 19 165 293 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 39 35 6 40 4 0 18 163 292 -4.568 -4.250 -2.265 -0.520 IL 40 40 5 40 4 1 24 167 295 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 41 41 6 41 3 1 23 167 295 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - A - - - ML 42 41 6 44 3 1 24 165 294 -4.064 -0.094 -8.178 1.290 -2.381 -0.114 -1.188 D 43 41 6 44 3 0 17 162 291 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 23 165 294 -1.927 -0.522 -4.627 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - a - - - ML 45 44 3 47 3 1 24 164 293 -9.524 -0.007 -8.178 0.743 -1.116 -0.449 0.180 D 46 44 3 47 3 0 16 161 290 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 22 164 293 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 48 47 3 50 3 1 23 163 292 -9.524 -0.007 -8.178 -3.225 -2.114 -3.965 1.847 D 49 47 3 50 3 0 16 160 289 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 21 163 292 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 51 50 3 53 3 1 22 162 291 -9.524 -0.007 -8.178 -2.580 -2.386 1.809 -2.857 D 52 50 3 53 3 0 15 159 288 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 20 162 291 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 54 53 3 56 3 1 21 161 290 -9.524 -0.007 -8.178 1.754 -2.967 -2.070 -1.937 D 55 53 3 56 3 0 14 158 287 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 19 161 290 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 13 - U - - - ML 57 56 3 59 3 1 20 160 289 -9.524 -0.007 -8.178 -4.201 -3.826 -5.002 1.943 D 58 56 3 59 3 0 13 157 286 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 18 160 289 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - G - - - ML 60 59 3 62 3 1 19 159 288 -9.524 -0.007 -8.178 -1.952 -4.505 1.861 -3.943 D 61 59 3 62 3 0 13 156 284 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 18 159 288 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - A - - - ML 63 62 3 65 3 1 19 158 287 -9.524 -0.007 -8.178 1.735 -1.907 -2.252 -2.362 D 64 62 3 65 3 0 12 155 283 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 17 158 287 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - C - - - ML 66 65 3 68 3 1 18 157 286 -9.524 -0.023 -6.092 -0.907 1.046 -0.566 -0.460 D 67 65 3 68 3 0 12 153 281 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 16 157 286 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - c - - - ML 69 68 3 71 3 1 18 156 285 -9.508 -0.007 -8.162 0.268 0.361 -1.062 0.046 D 70 68 3 71 3 0 11 151 279 -6.559 -1.084 -0.950 IL 71 71 3 71 3 1 15 156 285 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - A - - - ML 72 71 3 74 3 1 17 155 284 -2.464 -0.294 -8.178 1.287 -1.250 -1.261 -0.470 D 73 71 3 74 3 0 10 137 265 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 18 166 295 -0.207 -2.950 -7.945 0.000 0.000 0.000 0.000 [ MATL 20 ] 34 - C - - - ML 75 74 3 77 3 1 16 124 218 -9.524 -0.007 -8.178 -0.802 1.032 -0.679 -0.402 D 76 74 3 77 3 0 9 122 215 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 14 125 218 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 35 - U - - - ML 78 77 3 80 3 1 15 123 217 -9.524 -0.007 -8.178 -2.317 -0.762 -2.455 1.598 D 79 77 3 80 3 0 8 120 214 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 13 124 217 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 36 - G - - - ML 81 80 3 83 3 1 14 122 216 -9.524 -0.020 -6.339 -1.170 -1.994 1.534 -1.290 D 82 80 3 83 3 0 8 119 213 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 12 123 216 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 37 - G - - - ML 84 83 3 86 3 1 14 121 215 -9.511 -0.007 -8.165 -1.383 -2.073 1.522 -0.978 D 85 83 3 86 3 0 7 118 212 -6.487 -2.000 -0.437 IL 86 86 3 86 3 1 12 122 215 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 38 - U - - - ML 87 86 3 89 3 1 14 120 214 -9.511 -0.007 -8.165 -1.669 -1.856 -0.593 1.458 D 88 86 3 89 3 0 6 117 211 -6.487 -2.000 -0.437 IL 89 89 3 89 3 1 11 121 214 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 39 - G - - - ML 90 89 3 92 3 1 13 119 213 -9.511 -0.007 -8.165 -0.138 -3.463 1.524 -3.005 D 91 89 3 92 3 0 6 116 210 -6.487 -2.000 -0.437 IL 92 92 3 92 3 1 11 120 213 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 40 - G - - - ML 93 92 3 95 3 1 12 118 212 -2.066 -0.400 -8.165 -2.440 -2.670 1.793 -2.365 D 94 92 3 95 3 0 5 115 209 -6.487 -2.000 -0.437 IL 95 95 3 95 3 1 11 118 212 -1.650 -0.590 -5.861 0.000 0.000 0.000 0.000 [ MATL 27 ] 44 - C - - - ML 96 95 3 98 3 1 11 117 210 -9.511 -0.016 -6.703 -1.966 1.435 -2.418 -0.229 D 97 95 3 98 3 0 5 115 208 -6.487 -1.168 -0.879 IL 98 98 3 98 3 1 9 117 211 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 45 - g - - - ML 99 98 3 101 3 1 11 116 209 -9.515 -0.007 -8.169 0.259 -0.771 0.408 -0.167 D 100 98 3 101 3 0 3 113 207 -6.395 -1.908 -0.471 IL 101 101 3 101 3 1 8 116 210 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 46 - U - - - ML 102 101 3 104 3 1 10 115 208 -9.515 -0.007 -8.169 -2.551 -1.672 -2.492 1.739 D 103 101 3 104 3 0 3 113 206 -6.395 -1.292 -0.786 IL 104 104 3 104 3 1 8 115 209 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 47 - a - - - ML 105 104 3 107 3 1 9 114 207 -9.524 -0.007 -8.178 0.765 0.125 -0.898 -0.571 D 106 104 3 107 3 0 2 111 205 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 7 114 208 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 48 - U - - - ML 108 107 3 110 3 1 8 113 206 -9.524 -0.007 -8.178 -2.579 -1.960 -2.306 1.754 D 109 107 3 110 3 0 1 110 204 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 6 113 207 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 49 - G - - - ML 111 110 3 113 3 1 8 112 205 -3.128 -0.181 -8.178 -1.996 -3.796 1.813 -2.615 D 112 110 3 113 3 0 1 109 203 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 6 112 205 -2.269 -0.395 -4.969 0.000 0.000 0.000 0.000 [ MATL 33 ] 51 - A - - - ML 114 113 3 116 3 1 7 111 204 -9.524 -0.007 -8.178 1.734 -3.618 -1.010 -3.400 D 115 113 3 116 3 0 0 108 202 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 5 111 205 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 52 - G - - - ML 117 116 3 119 3 1 6 110 203 -9.524 -0.007 -8.178 -0.350 -1.633 1.324 -1.362 D 118 116 3 119 3 0 0 107 201 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 4 110 204 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 53 - U - - - ML 120 119 3 122 3 1 6 109 202 -9.524 -0.007 -8.178 -0.401 -1.978 -1.662 1.419 D 121 119 3 122 3 0 0 106 200 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 3 109 203 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 54 - C - - - ML 123 122 3 125 3 1 5 108 201 -9.524 -0.007 -8.178 -1.885 1.291 -1.695 -0.038 D 124 122 3 125 3 0 0 105 199 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 3 108 202 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 55 - A - - - ML 126 125 3 128 3 1 4 107 200 -9.524 -0.007 -8.178 1.223 -1.985 -0.569 -0.437 D 127 125 3 128 3 0 0 104 198 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 2 107 201 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 56 - U - - - ML 129 128 3 131 3 1 3 106 199 -9.524 -0.034 -5.495 -0.783 -1.238 -1.631 1.418 D 130 128 3 131 3 0 0 103 197 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 2 106 200 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 57 - a - - - ML 132 131 3 134 3 1 4 105 198 -9.497 -0.007 -8.151 0.447 -0.365 0.019 -0.240 D 133 131 3 134 3 0 0 102 196 -6.769 -2.282 -0.349 IL 134 134 3 134 3 1 1 105 199 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 58 - c - - - ML 135 134 3 137 3 1 3 104 197 -9.497 -0.007 -8.151 -0.528 0.563 -0.167 -0.091 D 136 134 3 137 3 0 0 102 195 -6.769 -0.880 -1.160 IL 137 137 3 137 3 1 1 104 198 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 59 - A - - - ML 138 137 3 140 3 1 3 103 196 -9.524 -0.007 -8.178 1.472 -1.817 -1.767 -0.624 D 139 137 3 140 3 0 0 100 194 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 103 197 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 60 - U - - - ML 141 140 3 143 3 1 2 102 195 -9.524 -0.007 -8.178 -1.982 -0.226 -1.995 1.401 D 142 140 3 143 3 0 0 99 193 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 102 196 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 61 - G - - - ML 144 143 3 146 3 1 1 101 194 -9.524 -0.018 -6.468 -0.604 -1.317 1.218 -0.703 D 145 143 3 146 3 0 0 98 192 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 101 195 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 62 - A - - - ML 147 146 3 149 3 1 2 100 193 -9.513 -0.007 -8.167 1.010 -0.667 -1.072 -0.184 D 148 146 3 149 3 0 0 98 191 -6.454 -1.211 -0.845 IL 149 149 3 149 3 1 1 100 194 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 63 - U - - - ML 150 149 3 152 3 1 1 99 192 -9.524 -0.007 -8.178 -4.201 -3.826 -5.002 1.943 D 151 149 3 152 3 0 0 96 190 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 99 193 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 64 - G - - - ML 153 152 3 155 3 1 1 98 191 -9.524 -0.007 -8.178 -4.174 -5.696 1.960 -4.907 D 154 152 3 155 3 0 0 95 189 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 98 192 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 65 - A - - - ML 156 155 3 158 3 1 1 97 190 -4.505 -0.070 -8.178 1.588 -3.513 -0.320 -3.242 D 157 155 3 158 3 0 0 94 188 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 97 190 -1.812 -0.575 -4.512 0.000 0.000 0.000 0.000 [ MATL 48 ] 67 - a - - - ML 159 158 3 161 3 1 1 96 189 -9.524 -0.007 -8.178 0.640 -0.237 -0.980 0.119 D 160 158 3 161 3 0 0 93 186 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 96 190 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 68 - U - - - ML 162 161 3 164 3 1 1 95 188 -9.524 -0.007 -8.178 -1.957 -0.224 -3.031 1.467 D 163 161 3 164 3 0 0 92 185 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 95 189 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 69 - A - - - ML 165 164 3 167 3 1 1 94 187 -9.524 -0.007 -8.178 1.395 -1.887 -0.387 -1.576 D 166 164 3 167 3 0 0 91 184 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 94 188 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 70 - c - - - ML 168 167 3 170 3 1 1 93 186 -9.524 -0.146 -3.398 -0.085 0.840 -2.237 0.076 D 169 167 3 170 3 0 0 89 182 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 93 187 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 71 - A - - - ML 171 170 3 173 3 1 1 92 186 -9.386 -0.354 -2.211 1.174 -0.467 -1.587 -0.540 D 172 170 3 173 3 0 0 86 180 -7.978 -3.491 -0.141 IL 173 173 3 173 3 1 1 93 187 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 72 - a - - - ML 174 173 3 176 3 1 1 92 185 -9.042 -0.121 -3.666 0.952 -0.615 -1.192 -0.036 D 175 173 3 176 3 0 0 85 179 -9.303 -4.816 -0.055 IL 176 176 3 176 3 1 1 93 186 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 73 - c - - - ML 177 176 3 179 3 1 1 91 185 -2.253 -0.787 -2.246 0.209 0.361 -1.131 0.142 D 178 176 3 179 3 0 0 85 178 -3.797 -1.446 -0.834 IL 179 179 3 179 3 1 1 98 192 -0.284 -2.530 -7.436 0.000 0.000 0.000 0.000 [ MATL 55 ] 87 - g - - - ML 180 179 3 182 3 1 1 29 48 -8.965 -0.010 -7.619 0.254 -0.911 0.868 -1.148 D 181 179 3 182 3 0 0 27 46 -9.460 -1.148 -0.869 IL 182 182 3 182 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 88 - U - - - ML 183 182 3 185 3 1 1 28 46 -9.253 -0.008 -7.907 -1.044 -1.303 -1.181 1.416 D 184 182 3 185 3 0 0 26 45 -8.676 -4.189 -0.085 IL 185 185 3 185 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 89 - G - - - ML 186 185 3 188 3 1 1 27 45 -9.253 -0.008 -7.907 0.201 -1.321 1.049 -1.396 D 187 185 3 188 3 0 0 26 44 -8.676 -0.322 -2.338 IL 188 188 3 188 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 90 - U - - - ML 189 188 3 191 3 1 1 26 44 -9.500 -0.007 -8.154 -0.284 -1.213 -2.332 1.350 D 190 188 3 191 3 0 0 25 44 -6.705 -2.218 -0.367 IL 191 191 3 191 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 91 - C - - - ML 192 191 3 194 3 1 1 24 43 -9.500 -0.007 -8.154 -1.040 1.169 -1.661 -0.076 D 193 191 3 194 3 0 0 24 43 -6.705 -0.936 -1.096 IL 194 194 3 194 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 92 - U - - - ML 195 194 3 197 3 1 1 23 42 -9.524 -0.007 -8.178 -2.547 -1.595 -2.513 1.732 D 196 194 3 197 3 0 0 23 42 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 93 - G - - - ML 198 197 3 200 3 1 1 22 41 -9.524 -0.007 -8.178 -0.329 -3.549 1.585 -3.086 D 199 197 3 200 3 0 0 22 41 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 94 - G - - - ML 201 200 3 203 3 1 1 21 40 -9.524 -0.007 -8.178 -0.175 -1.369 1.147 -0.966 D 202 200 3 203 3 0 0 21 40 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 95 - A - - - ML 204 203 3 206 3 1 1 20 39 -9.524 -0.007 -8.178 1.535 -3.502 -0.143 -3.212 D 205 203 3 206 3 0 0 20 38 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 96 - A - - - ML 207 206 3 209 3 1 1 19 37 -9.524 -0.007 -8.178 1.859 -3.590 -3.598 -2.278 D 208 206 3 209 3 0 0 19 37 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 97 - c - - - ML 210 209 3 212 3 1 1 18 36 -9.524 -0.007 -8.178 -0.582 0.866 -0.055 -0.870 D 211 209 3 212 3 0 0 18 36 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 98 - U - - - ML 213 212 3 215 3 1 1 16 35 -9.524 -0.007 -8.178 -2.361 -2.854 -3.732 1.845 D 214 212 3 215 3 0 0 17 35 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 99 - C - - - ML 216 215 3 218 3 1 1 15 34 -9.524 -0.007 -8.178 -3.437 1.766 -4.295 -1.130 D 217 215 3 218 3 0 0 16 34 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 100 - U - - - ML 219 218 3 221 3 1 1 14 32 -9.524 -0.007 -8.178 -3.180 -1.979 -3.919 1.836 D 220 218 3 221 3 0 0 15 33 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 101 - G - - - ML 222 221 3 224 3 1 1 12 30 -9.524 -0.007 -8.178 -2.834 -5.062 1.919 -4.413 D 223 221 3 224 3 0 0 13 32 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 102 - A - - - ML 225 224 3 227 2 1 1 1 1 * 0.000 1.962 -5.171 -4.613 -4.874 D 226 224 3 227 2 0 0 0 0 * 0.000 IL 227 227 3 227 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 228 227 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD113 ACC RF00181 DESC Small nucleolar RNA SNORD113/SNORD114 family LENG 75 MAXL 228 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:23:09 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 59 EFFN 11.015686 CKSUM 823253948 STATS LOCAL MSV -8.4216 0.71868 STATS LOCAL VITERBI -9.4384 0.71868 STATS LOCAL FORWARD -3.5659 0.71868 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30528 1.74163 1.34747 1.22495 1.38629 1.38629 1.38629 1.38629 0.03693 4.98892 3.52519 1.46634 0.26236 0.00000 * 1 2.11643 2.66678 2.96442 0.27645 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.01404 4.96602 4.96602 1.46634 0.26236 0.38032 1.15089 2 1.88488 2.72251 0.38132 2.30773 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 3 2.01980 2.55068 0.32918 2.66251 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 4 0.14954 4.38986 2.28733 3.69071 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 5 2.09564 1.09055 1.99337 0.90451 5 u - - < 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 6 2.24395 0.67642 2.15375 1.31126 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 7 0.47150 3.19306 1.45700 2.28325 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.07608 2.71145 4.98892 0.19381 1.73624 1.09861 0.40547 8 0.85700 2.20479 1.69988 1.26376 9 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 9 3.76746 2.90215 4.27858 0.09638 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 10 3.31372 3.05471 0.12186 3.46710 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 11 0.15892 3.57004 2.87191 2.77752 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 12 4.51131 4.23452 5.07190 0.03226 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 13 2.77310 4.68498 0.08932 4.28694 14 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 14 0.17122 2.73590 3.01797 3.13205 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 15 2.08024 0.63114 1.77355 1.75224 16 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02538 4.98892 4.00387 1.46634 0.26236 1.09861 0.40547 16 1.19814 1.11594 2.15174 1.36902 17 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01388 4.97742 4.97742 1.46634 0.26236 0.55781 0.84971 17 0.47295 2.29453 2.29977 1.73871 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.21949 1.65936 4.98892 2.34093 0.10119 1.09861 0.40547 18 1.99745 0.64081 1.85649 1.70797 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 19 3.15359 1.92521 3.16233 0.26250 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 20 2.25344 2.81705 0.30589 2.31550 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02296 4.98892 4.14210 1.46634 0.26236 1.09861 0.40547 21 2.42219 2.88220 0.31411 2.08088 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01385 4.97980 4.97980 1.46634 0.26236 1.46608 0.26244 22 2.68647 2.78287 1.78789 0.35282 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01385 4.97980 4.97980 1.46634 0.26236 1.46608 0.26244 23 1.48173 3.94734 0.31865 3.63754 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01385 4.97980 4.97980 1.46634 0.26236 1.46608 0.26244 24 3.20101 3.27460 0.13303 3.07900 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.29582 1.38949 4.97980 0.38605 1.13861 1.46608 0.26244 25 2.86075 0.37269 3.12265 1.56134 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.02019 4.97980 4.33416 1.46634 0.26236 0.61926 0.77293 26 1.20692 1.93674 1.08374 1.52150 45 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01381 4.98272 4.98272 1.46634 0.26236 1.36282 0.29563 27 3.30053 2.59154 3.16390 0.16727 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01381 4.98272 4.98272 1.46634 0.26236 0.71718 0.66968 28 0.84181 1.27966 2.03011 1.83497 47 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 29 3.31933 2.81102 3.01810 0.15690 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 30 2.82103 4.13973 0.12159 3.24372 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.13807 2.10248 4.98892 0.10804 2.27877 1.09861 0.40547 31 0.17512 4.07017 2.08630 3.94117 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 32 1.64676 2.56051 0.44688 2.40306 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 33 1.68098 2.88861 2.59575 0.38043 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 34 2.83205 0.46864 2.58821 1.42669 54 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 35 0.51586 2.88685 1.78740 1.71555 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 36 1.96401 2.29342 2.56142 0.38333 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03327 4.98892 3.65331 1.46634 0.26236 1.09861 0.40547 37 1.07003 1.63598 1.36063 1.58113 57 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01399 4.96964 4.96964 1.46634 0.26236 1.75825 0.18916 38 1.79718 0.96868 1.48991 1.47291 58 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01399 4.96964 4.96964 1.46634 0.26236 0.42265 1.06511 39 0.34522 2.72868 2.68377 1.84313 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 40 2.92097 1.54127 2.82940 0.39607 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 41 1.84355 2.33250 0.51730 1.90674 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02186 4.98892 4.21239 1.46634 0.26236 1.09861 0.40547 42 0.66756 1.86027 2.16086 1.53161 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01383 4.98089 4.98089 1.46634 0.26236 0.65233 0.73571 43 4.51131 4.23452 5.07190 0.03226 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 44 4.44621 5.52682 0.02302 4.95428 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 45 0.27583 4.02221 1.59873 3.86364 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05888 2.98837 4.98892 0.25153 1.50331 1.09861 0.40547 46 0.93025 1.54694 2.09322 1.31172 67 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 47 2.85915 1.53942 3.64947 0.35358 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 48 0.39917 2.77013 1.65469 2.58598 69 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 49 1.45278 0.77713 3.07067 1.34720 70 c - - _ 1.38629 1.38629 1.38629 1.38629 0.11300 4.98892 2.30223 1.46634 0.26236 1.09861 0.40547 50 0.55042 1.70995 2.55864 1.80175 71 A - - _ 1.38629 1.38629 1.38629 1.38629 0.26380 4.89106 1.49450 1.46634 0.26236 2.81439 0.06181 51 0.70570 1.82648 2.25916 1.42371 72 a - - _ 1.38629 1.38629 1.38629 1.38629 0.10007 4.64663 2.45771 1.46634 0.26236 2.21907 0.11509 52 1.24182 1.11248 2.20885 1.29985 73 c - - _ 1.38629 1.38629 1.38629 1.38629 0.56064 1.53427 1.54392 2.19927 0.11753 0.91491 0.51175 53 1.21534 2.03578 0.74955 2.30028 87 g - - _ 1.38629 1.38629 1.38629 1.38629 0.02047 4.59192 4.59192 1.46634 0.26236 0.77802 0.61492 54 2.17991 2.35368 2.22463 0.38006 88 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01665 4.79704 4.79704 1.46634 0.26236 3.35430 0.03556 55 1.25203 2.33791 0.62919 2.47073 89 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01665 4.79704 4.79704 1.46634 0.26236 0.16863 1.86318 56 1.59327 2.28166 3.14142 0.42862 90 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01395 4.97214 4.97214 1.46634 0.26236 1.69415 0.20304 57 2.16699 0.54982 2.57869 1.45864 91 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01395 4.97214 4.97214 1.46634 0.26236 0.45809 1.00101 58 3.29891 2.53367 3.18093 0.17178 92 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 59 1.61702 4.00506 0.27668 3.68917 93 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 60 1.52177 2.37220 0.56654 2.11266 94 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 61 0.31195 4.02337 1.47457 3.85314 95 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 62 0.08897 4.02373 4.04598 3.00071 96 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 63 1.83621 0.75402 1.40800 2.07563 97 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 64 3.08610 3.49411 4.10778 0.09706 98 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 65 3.95184 0.15159 4.53295 2.20102 99 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 66 3.73704 2.80164 4.24772 0.10406 100 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 67 3.41467 5.08224 0.05023 4.61606 101 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 68 0.02127 5.17733 4.78266 4.95751 102 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 69 1.82623 2.40512 0.51173 1.90203 103 G - - > 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 70 1.81049 2.05317 0.53903 2.08115 104 G - - > 1.38629 1.38629 1.38629 1.38629 0.02571 4.98892 3.98610 1.46634 0.26236 1.09861 0.40547 71 3.72593 3.10840 4.27170 0.08634 105 U - - > 1.38629 1.38629 1.38629 1.38629 0.01388 4.97709 4.97709 1.46634 0.26236 0.55025 0.85992 72 2.63333 0.38067 2.76103 1.70634 106 C - - > 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 73 1.99162 0.53151 2.52590 1.63056 107 C - - > 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 74 0.28233 3.61834 1.75938 3.05775 108 A - - : 1.38629 1.38629 1.38629 1.38629 0.01372 4.98892 4.98892 1.46634 0.26236 1.09861 0.40547 75 1.08905 1.53262 2.13559 1.11072 109 a - - : 1.38629 1.38629 1.38629 1.38629 0.00688 4.98208 * 1.46634 0.26236 0.00000 * //