INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD61 ACC RF00270 DESC Small nucleolar RNA SNORD61 STATES 220 NODES 72 CLEN 72 W 108 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:29:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 36 EFFN 6.763184 CKSUM 594311165 NULL 0.000 0.000 0.000 0.000 GA 43.00 TC 43.20 NC 42.70 EFP7GF -12.8101 0.71871 ECMLC 0.54079 -8.11599 2.57544 1600000 389222 0.003083 ECMGC 0.39819 -16.14460 -2.39520 1600000 95443 0.004191 ECMLI 0.49324 -6.11346 5.01294 1600000 290129 0.004136 ECMGI 0.39244 -12.80115 0.42735 1600000 71891 0.005564 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 108 154 -8.041 -9.287 -0.035 -5.740 IL 1 1 2 1 4 1 30 109 155 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 31 109 155 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 88 - u - - MR 3 2 3 5 3 2 32 108 154 -9.486 -0.008 -7.804 -0.635 -0.170 -0.840 0.933 D 4 2 3 5 3 0 26 106 152 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 31 108 154 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 87 - U - - MR 6 5 3 8 5 1 31 107 153 -8.172 -0.018 -7.988 -8.200 -9.092 -0.570 -1.647 -1.132 1.351 D 7 5 3 8 5 0 25 105 151 -5.352 -0.707 -2.978 -4.409 -2.404 IR 8 8 3 8 5 1 28 107 153 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 86 G C - - MP 9 8 3 13 6 2 30 106 152 -9.715 -9.654 -0.014 -8.431 -8.711 -9.106 -4.517 -3.078 -4.393 0.460 -5.321 -4.790 0.182 -4.983 -4.588 3.473 -4.858 -0.152 -0.370 -4.186 -2.476 -3.339 ML 10 8 3 13 6 1 26 104 150 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 3 13 6 1 24 104 150 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 22 102 147 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 27 105 151 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 27 105 151 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 85 C G - - MP 15 14 6 19 4 2 28 104 150 -8.195 -4.293 -0.094 -6.816 -5.082 -4.972 -4.826 -0.980 -3.491 -5.314 3.470 -4.271 -4.806 0.140 -5.144 -2.771 1.175 -5.154 -1.102 -3.588 ML 16 14 6 19 4 1 25 103 149 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 22 102 148 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 18 14 6 19 4 0 21 101 147 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 27 104 150 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 26 103 149 -1.759 -0.602 -4.459 0.000 0.000 0.000 0.000 [ MATL 5 ] 3 - u - - - ML 21 20 6 23 3 1 27 102 148 -9.150 -0.009 -7.804 -0.079 -0.729 -0.660 0.862 D 22 20 6 23 3 0 20 100 145 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 25 102 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 4 - A - - - ML 24 23 3 26 3 1 26 101 147 -9.150 -0.009 -7.804 1.096 -2.846 0.615 -2.382 D 25 23 3 26 3 0 20 99 144 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 25 101 147 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - U - - - ML 27 26 3 29 3 1 25 100 146 -9.150 -0.009 -7.804 -1.944 -2.082 -1.110 1.604 D 28 26 3 29 3 0 19 98 143 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 24 100 146 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - G - - - ML 30 29 3 32 3 1 24 99 145 -9.150 -0.009 -7.804 -3.689 -5.147 1.944 -4.427 D 31 29 3 32 3 0 18 97 142 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 23 99 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - A - - - ML 33 32 3 35 3 1 23 98 144 -9.150 -0.009 -7.804 1.944 -4.592 -4.056 -4.311 D 34 32 3 35 3 0 17 96 141 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 98 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 8 - U - - - ML 36 35 3 38 3 1 22 97 143 -9.150 -0.009 -7.804 -3.627 -3.305 -4.417 1.915 D 37 35 3 38 3 0 17 95 140 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 97 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 9 - G - - - ML 39 38 3 41 3 1 21 96 142 -9.150 -0.009 -7.804 -2.785 -3.912 1.843 -2.307 D 40 38 3 41 3 0 16 94 139 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 96 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 10 - A - - - ML 42 41 3 44 3 1 21 95 141 -9.150 -0.009 -7.804 1.809 -3.074 -3.058 -1.955 D 43 41 3 44 3 0 15 93 138 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 20 95 141 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - a - - - ML 45 44 3 47 3 1 20 94 140 -9.150 -0.009 -7.804 0.836 -0.207 -1.375 -0.054 D 46 44 3 47 3 0 14 92 137 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 19 94 140 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 12 - U - - - ML 48 47 3 50 3 1 19 93 139 -9.150 -0.009 -7.804 -1.696 -0.303 -2.046 1.400 D 49 47 3 50 3 0 14 90 136 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 93 139 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - U - - - ML 51 50 3 53 3 1 18 92 138 -3.386 -0.152 -7.804 -1.363 -1.102 -0.704 1.340 D 52 50 3 53 3 0 13 89 135 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 18 92 138 -1.648 -0.629 -4.870 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 54 53 3 56 3 1 17 91 136 -9.150 -0.009 -7.804 -1.506 -1.351 -2.774 1.637 D 55 53 3 56 3 0 12 88 134 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 91 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 57 56 3 59 3 1 16 90 135 -9.150 -0.009 -7.804 0.109 -0.327 -0.123 0.271 D 58 56 3 59 3 0 11 88 133 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 15 90 136 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - A - - - ML 60 59 3 62 3 1 15 89 134 -9.150 -0.070 -4.444 1.092 -1.303 -1.369 0.106 D 61 59 3 62 3 0 11 87 133 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 15 89 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - U - - - ML 63 62 3 65 3 1 15 88 134 -9.089 -0.009 -7.743 -0.286 -0.776 -1.093 1.089 D 64 62 3 65 3 0 10 86 132 -7.079 -0.663 -1.470 IL 65 65 3 65 3 1 14 88 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 66 65 3 68 3 1 14 87 133 -9.150 -0.009 -7.804 -0.502 -1.075 -0.292 1.002 D 67 65 3 68 3 0 8 83 129 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 13 87 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - G - - - ML 69 68 3 71 3 1 13 86 132 -3.409 -0.187 -5.195 -0.605 -0.826 1.021 -0.415 D 70 68 3 71 3 0 7 80 126 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 14 91 136 -0.579 -1.672 -5.902 0.000 0.000 0.000 0.000 [ MATL 22 ] 28 - c - - - ML 72 71 3 74 3 1 13 71 96 -4.549 -0.070 -7.771 -0.357 0.765 -1.162 0.102 D 73 71 3 74 3 0 7 68 93 -6.740 -2.253 -0.357 IL 74 74 3 74 3 1 12 71 96 -1.718 -0.623 -4.418 0.000 0.000 0.000 0.000 [ MATL 23 ] 30 - a - - - ML 75 74 3 77 3 1 12 69 94 -9.117 -0.009 -7.771 0.865 -1.406 -0.695 0.244 D 76 74 3 77 3 0 6 67 92 -6.740 -2.253 -0.357 IL 77 77 3 77 3 1 11 71 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 31 - u - - - ML 78 77 3 80 3 1 11 68 93 -9.117 -0.009 -7.771 -0.277 -0.349 -0.626 0.801 D 79 77 3 80 3 0 6 66 91 -6.740 -2.253 -0.357 IL 80 80 3 80 3 1 10 70 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 32 - U - - - ML 81 80 3 83 3 1 10 67 92 -9.117 -0.047 -5.053 -1.797 -0.978 -1.836 1.548 D 82 80 3 83 3 0 5 65 90 -6.740 -2.253 -0.357 IL 83 83 3 83 3 1 10 69 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 33 - G - - - ML 84 83 3 86 3 1 10 66 91 -9.079 -0.009 -7.733 -1.010 -1.603 1.466 -1.282 D 85 83 3 86 3 0 5 64 89 -7.178 -2.691 -0.255 IL 86 86 3 86 3 1 9 68 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 34 - A - - - ML 87 86 3 89 3 1 9 65 90 -9.079 -0.009 -7.733 1.803 -3.012 -2.983 -1.946 D 88 86 3 89 3 0 5 64 89 -7.178 -0.608 -1.569 IL 89 89 3 89 3 1 8 67 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 35 - U - - - ML 90 89 3 92 3 1 8 64 89 -9.150 -0.009 -7.804 -0.378 -1.283 -0.994 1.213 D 91 89 3 92 3 0 3 63 88 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 66 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 36 - c - - - ML 93 92 3 95 3 1 7 63 88 -9.150 -0.009 -7.804 -0.487 0.683 -0.358 -0.151 D 94 92 3 95 3 0 2 62 87 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 65 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 37 - a - - - ML 96 95 3 98 3 1 6 62 87 -9.150 -0.064 -4.589 0.916 -1.204 -0.889 0.188 D 97 95 3 98 3 0 2 61 86 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 6 64 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 38 - U - - - ML 99 98 3 101 3 1 6 61 86 -9.095 -0.056 -4.790 -0.164 -1.330 -1.258 1.196 D 100 98 3 101 3 0 1 60 85 -7.006 -1.325 -0.754 IL 101 101 3 101 3 1 5 63 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 39 - c - - - ML 102 101 3 104 3 1 7 60 85 -9.078 -0.009 -7.732 0.084 0.737 -1.257 -0.226 D 103 101 3 104 3 0 0 59 84 -7.187 -1.089 -0.935 IL 104 104 3 104 3 1 4 62 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 40 - U - - - ML 105 104 3 107 3 1 6 59 84 -4.011 -0.099 -7.778 -0.395 -0.843 -1.175 1.163 D 106 104 3 107 3 0 0 57 82 -6.639 -2.152 -0.387 IL 107 107 3 107 3 1 4 60 85 -1.834 -0.564 -4.534 0.000 0.000 0.000 0.000 [ MATL 34 ] 42 - G - - - ML 108 107 3 110 3 1 6 58 83 -9.124 -0.009 -7.778 -1.117 -2.576 1.557 -1.224 D 109 107 3 110 3 0 0 56 81 -6.639 -2.152 -0.387 IL 110 110 3 110 3 1 3 59 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 43 - A - - - ML 111 110 3 113 3 1 5 57 82 -9.124 -0.009 -7.778 1.225 -0.692 -1.320 -0.639 D 112 110 3 113 3 0 0 55 80 -6.639 -2.152 -0.387 IL 113 113 3 113 3 1 3 58 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 44 - a - - - ML 114 113 3 116 3 1 4 56 81 -9.124 -0.009 -7.778 0.911 -0.559 -0.673 -0.299 D 115 113 3 116 3 0 0 55 80 -6.639 -0.999 -1.030 IL 116 116 3 116 3 1 2 57 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 45 - a - - - ML 117 116 3 119 3 1 3 55 80 -9.150 -0.009 -7.804 0.835 -0.668 -0.297 -0.373 D 118 116 3 119 3 0 0 53 78 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 2 56 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 46 - U - - - ML 120 119 3 122 3 1 2 54 79 -9.150 -0.009 -7.804 -0.906 -1.089 -1.466 1.397 D 121 119 3 122 3 0 0 52 77 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 55 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 47 - G - - - ML 123 122 3 125 3 1 1 53 78 -9.150 -0.064 -4.590 -0.283 -1.955 1.374 -1.603 D 124 122 3 125 3 0 0 51 76 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 54 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 48 - A - - - ML 126 125 3 128 3 1 1 52 77 -9.095 -0.034 -5.528 1.599 -2.252 -1.645 -1.182 D 127 125 3 128 3 0 0 50 75 -7.006 -2.519 -0.290 IL 128 128 3 128 3 1 1 53 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 49 - u - - - ML 129 128 3 131 3 1 2 51 76 -4.789 -0.060 -7.725 -0.250 -0.531 -0.981 0.971 D 130 128 3 131 3 0 0 49 74 -7.261 -2.774 -0.239 IL 131 131 3 131 3 1 1 52 77 -1.670 -0.650 -4.370 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - a - - - ML 132 131 3 134 3 1 1 50 75 -9.071 -0.122 -3.660 0.802 -0.696 -0.360 -0.218 D 133 131 3 134 3 0 0 48 73 -7.261 -2.774 -0.239 IL 134 134 3 134 3 1 1 51 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - A - - - ML 135 134 3 137 3 1 2 49 74 -8.959 -0.010 -7.613 1.277 -1.396 -1.414 -0.284 D 136 134 3 137 3 0 0 47 72 -8.024 -3.537 -0.136 IL 137 137 3 137 3 1 1 50 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - u - - - ML 138 137 3 140 3 1 2 48 73 -8.959 -0.010 -7.613 0.259 -0.717 -1.205 0.816 D 139 137 3 140 3 0 0 46 71 -8.024 -1.231 -0.811 IL 140 140 3 140 3 1 1 49 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 54 - g - - - ML 141 140 3 143 3 1 2 47 72 -9.052 -0.010 -7.706 -0.105 -0.627 0.757 -0.449 D 142 140 3 143 3 0 0 45 70 -7.425 -2.071 -0.403 IL 143 143 3 143 3 1 1 48 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 55 - u - - - ML 144 143 3 146 3 1 1 46 71 -9.071 -0.010 -7.725 -0.129 -0.129 -1.705 0.899 D 145 143 3 146 3 0 0 45 70 -7.261 -0.566 -1.653 IL 146 146 3 146 3 1 1 47 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 56 - A - - - ML 147 146 3 149 3 1 1 45 70 -9.150 -0.009 -7.804 1.041 -0.603 -1.227 -0.223 D 148 146 3 149 3 0 0 43 68 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 46 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 57 - u - - - ML 150 149 3 152 3 1 1 44 69 -9.150 -0.009 -7.804 -0.482 0.290 -1.938 0.848 D 151 149 3 152 3 0 0 42 67 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 45 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 58 - u - - - ML 153 152 3 155 3 1 1 43 68 -1.390 -0.952 -3.300 0.118 -0.860 -1.072 0.917 D 154 152 3 155 3 0 0 38 63 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 43 68 -1.063 -0.971 -6.481 0.000 0.000 0.000 0.000 [ MATL 50 ] 63 - u - - - ML 156 155 3 158 3 1 1 34 53 -9.003 -0.010 -7.657 0.240 -0.522 -0.840 0.645 D 157 155 3 158 3 0 0 33 52 -7.779 -3.292 -0.163 IL 158 158 3 158 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 64 - U - - - ML 159 158 3 161 3 1 1 33 52 -9.003 -0.010 -7.657 0.021 -1.405 -1.260 1.131 D 160 158 3 161 3 0 0 32 51 -7.779 -0.371 -2.170 IL 161 161 3 161 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 65 - u - - - ML 162 161 3 164 3 1 1 32 51 -9.150 -0.009 -7.804 -1.240 -1.834 0.671 0.769 D 163 161 3 164 3 0 0 31 50 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 66 - U - - - ML 165 164 3 167 3 1 1 31 50 -9.150 -0.009 -7.804 -1.185 -2.218 -2.927 1.684 D 166 164 3 167 3 0 0 30 49 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 67 - C - - - ML 168 167 3 170 3 1 1 30 49 -9.150 -0.009 -7.804 -2.008 1.749 -3.566 -1.712 D 169 167 3 170 3 0 0 29 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 68 - C - - - ML 171 170 3 173 3 1 1 29 48 -9.150 -0.009 -7.804 -4.240 1.931 -4.887 -3.312 D 172 170 3 173 3 0 0 28 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 69 - U - - - ML 174 173 3 176 3 1 1 28 47 -9.150 -0.009 -7.804 -3.627 -3.305 -4.417 1.915 D 175 173 3 176 3 0 0 27 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 70 - C - - - ML 177 176 3 179 3 1 1 27 46 -9.150 -0.009 -7.804 -4.240 1.931 -4.887 -3.312 D 178 176 3 179 3 0 0 26 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 71 - U - - - ML 180 179 3 182 3 1 1 26 45 -9.150 -0.009 -7.804 -3.627 -3.305 -4.417 1.915 D 181 179 3 182 3 0 0 25 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 72 - A - - - ML 183 182 3 185 3 1 1 25 43 -9.150 -0.009 -7.804 1.944 -4.592 -4.056 -4.311 D 184 182 3 185 3 0 0 24 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 73 - A - - - ML 186 185 3 188 3 1 1 24 42 -9.150 -0.009 -7.804 1.944 -4.592 -4.056 -4.311 D 187 185 3 188 3 0 0 23 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 74 - G - - - ML 189 188 3 191 3 1 1 23 41 -9.150 -0.009 -7.804 -3.689 -5.147 1.944 -4.427 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 75 - A - - - ML 192 191 3 194 3 1 1 21 40 -9.150 -0.009 -7.804 1.944 -4.592 -4.056 -4.311 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 76 - A - - - ML 195 194 3 197 3 1 1 20 39 -9.150 -0.009 -7.804 1.944 -4.592 -4.056 -4.311 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 77 - G - - - ML 198 197 3 200 3 1 1 19 38 -9.150 -0.009 -7.804 -3.689 -5.147 1.944 -4.427 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 78 - U - - - ML 201 200 3 203 3 1 1 18 36 -9.150 -0.009 -7.804 -3.627 -3.305 -4.417 1.915 D 202 200 3 203 3 0 0 18 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 79 - U - - - ML 204 203 3 206 3 1 1 17 35 -9.150 -0.009 -7.804 -1.074 -1.695 -2.092 1.576 D 205 203 3 206 3 0 0 17 35 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 80 - C - - - ML 207 206 3 209 3 1 1 15 34 -9.150 -0.009 -7.804 -4.240 1.931 -4.887 -3.312 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 81 - U - - - ML 210 209 3 212 3 1 1 14 32 -9.150 -0.009 -7.804 -3.627 -3.305 -4.417 1.915 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 82 - G - - - ML 213 212 3 215 3 1 1 12 31 -9.150 -0.009 -7.804 -3.689 -5.147 1.944 -4.427 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 70 ] 83 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.810 -2.171 -2.981 -2.792 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 71 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD61 ACC RF00270 DESC Small nucleolar RNA SNORD61 LENG 72 MAXL 148 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:29:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 36 EFFN 7.475098 CKSUM 594311165 STATS LOCAL MSV -8.3466 0.71871 STATS LOCAL VITERBI -9.1126 0.71871 STATS LOCAL FORWARD -3.1799 0.71871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.26971 1.73135 1.54765 1.11080 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 0.00000 * 1 2.34599 2.58063 0.27327 2.69365 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 2 3.33091 0.33783 2.53411 1.76263 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 3 1.44792 1.90718 1.84676 0.77937 3 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 4 0.61515 3.48511 0.94895 3.17862 4 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 5 2.83871 2.91749 2.15883 0.25881 5 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 6 4.05063 5.07455 0.03471 4.56096 6 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 7 0.03414 4.69539 4.31881 4.49965 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 8 4.02398 3.78881 4.57371 0.05216 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 9 3.41529 4.20131 0.10237 3.00648 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 10 0.12424 3.60358 3.60375 2.77443 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 11 0.79541 1.52644 2.37552 1.43410 11 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 12 2.64919 1.59851 2.85566 0.40111 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 13 2.41179 2.18308 1.87537 0.43951 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.12160 2.24230 4.79368 0.38417 1.14261 1.09861 0.40547 14 2.47573 2.35606 3.39780 0.23869 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 15 1.31556 1.61277 1.46526 1.19957 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 16 0.61467 2.32894 2.37248 1.31478 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06167 4.79368 2.96575 1.46634 0.26236 1.09861 0.40547 17 1.59523 1.94220 2.15837 0.61946 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01746 4.74948 4.74948 1.46634 0.26236 0.27876 1.41354 18 1.75904 2.16149 1.58172 0.67921 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 19 1.83923 1.96868 0.65846 1.69408 21 G - - _ 1.38629 1.38629 1.38629 1.38629 0.14702 2.25726 3.43932 1.58203 0.23012 1.09861 0.40547 20 1.65139 0.83756 2.21125 1.32468 28 c - - _ 1.38629 1.38629 1.38629 1.38629 0.06155 2.97185 4.76959 0.30370 1.33972 1.77059 0.18661 21 0.77498 2.40825 1.87822 1.21587 30 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01711 4.76959 4.76959 1.46634 0.26236 1.77059 0.18661 22 1.59282 1.63127 1.82116 0.82296 31 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01711 4.76959 4.76959 1.46634 0.26236 1.77059 0.18661 23 2.72204 2.08596 2.69279 0.29789 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04461 4.76959 3.34824 1.46634 0.26236 1.77059 0.18661 24 2.12656 2.52072 0.35461 2.31363 33 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01759 4.74257 4.74257 1.46634 0.26236 2.19911 0.11755 25 0.12743 3.56044 3.55100 2.77229 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01759 4.74257 4.74257 1.46634 0.26236 0.25078 1.50597 26 1.66330 2.31684 2.08649 0.53140 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 27 1.75101 0.89311 1.63046 1.50878 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 28 0.73952 2.25445 2.01839 1.25577 37 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05683 4.79368 3.05831 1.46634 0.26236 1.09861 0.40547 29 1.50685 2.35406 2.28218 0.54241 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.05144 4.75423 3.18150 1.46634 0.26236 0.81476 0.58474 30 1.33177 0.85609 2.28413 1.56396 39 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01760 4.74189 4.74189 1.46634 0.26236 0.63494 0.75495 31 1.67436 1.99047 2.21761 0.56727 40 U - - _ 1.38629 1.38629 1.38629 1.38629 0.08314 2.64032 4.77466 0.22186 1.61457 1.66292 0.21021 32 2.19451 3.24077 0.29527 2.25264 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01703 4.77466 4.77466 1.46634 0.26236 1.66292 0.21021 33 0.52168 1.87207 2.33432 1.85921 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01703 4.77466 4.77466 1.46634 0.26236 1.66292 0.21021 34 0.74345 1.77698 1.86036 1.61062 44 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01703 4.77466 4.77466 1.46634 0.26236 0.47669 0.96978 35 0.79702 1.85546 1.59070 1.66513 45 a - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 36 2.04788 2.17062 2.42718 0.40257 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 37 1.59567 2.78215 0.41913 2.55482 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05680 4.79368 3.05899 1.46634 0.26236 1.09861 0.40547 38 0.26490 3.01983 2.56415 2.23562 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03564 4.75426 3.63435 1.46634 0.26236 2.03695 0.13975 39 1.56966 1.76339 2.07774 0.70278 49 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05491 3.10874 4.73632 0.35509 1.20769 2.27540 0.10843 40 0.82029 1.87724 1.63633 1.55120 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.10020 4.73632 2.44681 1.46634 0.26236 2.27540 0.10843 41 0.48432 2.39646 2.40792 1.59534 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01920 4.65532 4.65532 1.46634 0.26236 2.92326 0.05526 42 1.20285 1.90024 2.24588 0.81127 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01920 4.65532 4.65532 1.46634 0.26236 0.80240 0.59466 43 1.47214 1.82416 0.84265 1.72236 54 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01794 4.72279 4.72279 1.46634 0.26236 1.49265 0.25460 44 1.48293 1.47336 2.61930 0.75285 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01770 4.73632 4.73632 1.46634 0.26236 0.23006 1.58225 45 0.65177 1.81030 2.26467 1.55396 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 46 1.73965 1.17326 2.79367 0.78995 57 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 47 1.30424 2.00378 2.14661 0.74041 58 u - - _ 1.38629 1.38629 1.38629 1.38629 0.72154 0.90515 2.21172 0.71870 0.66824 1.09861 0.40547 48 1.21793 1.75758 1.97972 0.93246 63 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01860 4.68695 4.68695 1.46634 0.26236 2.72281 0.06795 49 1.37500 2.41456 2.28734 0.58660 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01860 4.68695 4.68695 1.46634 0.26236 0.14085 2.02967 50 2.33144 2.74317 0.90053 0.83904 65 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 51 2.23200 3.00918 3.51248 0.20637 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 52 2.82207 0.16245 3.95214 2.64164 67 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 53 4.44129 0.04277 4.87037 3.79777 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 54 4.02398 3.78881 4.57371 0.05216 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 55 4.44129 0.04277 4.87037 3.79777 70 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 56 4.02398 3.78881 4.57371 0.05216 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 57 0.03414 4.69539 4.31881 4.49965 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 58 0.03414 4.69539 4.31881 4.49965 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 59 4.05063 5.07455 0.03471 4.56096 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 60 0.03414 4.69539 4.31881 4.49965 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 61 0.03414 4.69539 4.31881 4.49965 76 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 62 4.05063 5.07455 0.03471 4.56096 77 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 63 4.02398 3.78881 4.57371 0.05216 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 64 2.16332 2.62085 2.88759 0.27891 79 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 65 4.44129 0.04277 4.87037 3.79777 80 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 66 4.02398 3.78881 4.57371 0.05216 81 U - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 67 4.05063 5.07455 0.03471 4.56096 82 G - - _ 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 68 0.12316 2.91519 3.54604 3.41593 83 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06733 2.86760 4.79368 0.26963 1.44250 1.09861 0.40547 69 1.91404 2.63033 0.30810 3.08736 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 70 2.91091 0.33662 2.45842 1.92535 86 C - - > 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 71 1.80406 2.59410 2.18708 0.43323 87 U - - : 1.38629 1.38629 1.38629 1.38629 0.01670 4.79368 4.79368 1.46634 0.26236 1.09861 0.40547 72 1.85515 1.50213 1.97426 0.72970 88 u - - : 1.38629 1.38629 1.38629 1.38629 0.00839 4.78537 * 1.46634 0.26236 0.00000 * //