INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD59 ACC RF00273 DESC Small nucleolar RNA SNORD59 STATES 223 NODES 71 CLEN 73 W 95 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:29:38 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 24 EFFN 2.909180 CKSUM 4037578250 NULL 0.000 0.000 0.000 0.000 GA 45.00 TC 45.40 NC 43.40 EFP7GF -9.1945 0.71872 ECMLC 0.66038 -5.59982 2.91334 1600000 331708 0.003618 ECMGC 0.38782 -17.27261 -3.20767 1600000 93544 0.004276 ECMLI 0.64428 -3.27041 5.07277 1600000 259222 0.004629 ECMGI 0.43973 -11.06388 0.61176 1600000 67887 0.005892 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 95 122 -9.253 -9.192 -0.046 -5.505 -8.249 -8.644 IL 1 1 2 1 6 1 31 97 124 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 31 97 124 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 86 c g - - MP 3 2 3 7 6 4 31 95 122 -9.227 -9.166 -0.019 -7.943 -8.222 -8.617 -2.559 -2.656 -0.841 0.662 -1.247 -3.491 2.605 -2.775 -2.716 0.719 -3.250 -0.981 1.617 -2.849 -0.178 -1.779 ML 4 2 3 7 6 1 29 94 121 -6.589 -6.935 -0.921 -1.344 -6.785 -4.315 0.002 -0.408 -0.598 0.664 MR 5 2 3 7 6 1 28 94 121 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 25 91 118 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 30 95 122 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 30 95 122 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 85 C G - - MP 9 8 6 13 6 3 29 93 120 -9.253 -9.192 -0.019 -7.969 -8.249 -8.644 -4.775 -4.781 -4.419 -0.952 -3.046 -4.788 3.568 -3.882 -4.470 -0.773 -4.719 -2.783 0.473 -4.804 -0.087 -3.291 ML 10 8 6 13 6 1 28 92 119 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 27 92 119 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 25 90 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 28 93 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 28 93 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 84 U A - - MP 15 14 6 19 4 2 27 91 118 -7.302 -7.509 -0.451 -1.962 -3.533 -3.546 -3.589 -0.054 -2.955 -4.330 1.209 -3.528 -3.607 0.121 -4.100 -1.708 3.183 -3.774 -0.338 -0.473 ML 16 14 6 19 4 1 27 91 118 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 26 91 118 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 18 14 6 19 4 0 24 90 116 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 27 92 119 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 27 92 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 21 20 6 23 3 1 26 90 116 -4.846 -0.066 -6.636 -1.414 -1.423 -2.144 1.597 D 22 20 6 23 3 0 24 88 115 -7.001 -0.240 -2.784 IL 23 23 3 23 3 1 26 90 117 -2.064 -0.494 -4.302 0.000 0.000 0.000 0.000 [ MATR 5 ] - 83 - A - - MR 24 23 3 26 5 1 25 88 115 -7.387 -0.032 -7.202 -7.414 -8.306 1.560 -2.102 -0.999 -1.651 D 25 23 3 26 5 0 21 87 114 -5.352 -0.707 -2.978 -4.409 -2.404 IR 26 26 3 26 5 1 24 89 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 6 82 C G - - MP 27 26 3 31 4 2 24 87 114 -7.302 -7.509 -0.041 -5.923 -4.293 -4.270 -4.054 -0.444 -2.796 -4.521 3.310 -3.575 -4.071 -0.252 -4.399 -2.240 1.178 -4.374 0.391 -2.905 ML 28 26 3 31 4 1 22 87 114 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 3 31 4 1 20 86 113 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 3 31 4 0 18 85 112 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 23 88 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 23 88 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - a - - - ML 33 32 6 35 3 1 22 85 112 -8.296 -0.016 -6.950 0.434 -0.647 -0.310 0.268 D 34 32 6 35 3 0 18 84 110 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 22 87 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 36 35 3 38 3 1 21 84 111 -8.296 -0.016 -6.950 0.139 -0.035 -0.060 -0.053 D 37 35 3 38 3 0 17 83 109 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 21 86 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 39 38 3 41 3 1 21 83 110 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 40 38 3 41 3 0 16 82 108 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 20 85 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 42 41 3 44 3 1 20 82 109 -8.296 -0.016 -6.950 -2.269 -3.583 1.840 -2.967 D 43 41 3 44 3 0 15 81 107 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 19 84 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 45 44 3 47 3 1 19 81 108 -8.296 -0.016 -6.950 1.830 -3.043 -2.610 -2.654 D 46 44 3 47 3 0 15 80 106 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 19 83 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - U - - - ML 48 47 3 50 3 1 18 80 107 -8.296 -0.016 -6.950 -1.603 -1.228 -2.347 1.608 D 49 47 3 50 3 0 14 79 105 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 18 82 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 51 50 3 53 3 1 17 79 106 -8.296 -0.016 -6.950 -1.436 -2.114 1.651 -1.948 D 52 50 3 53 3 0 13 78 104 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 81 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 54 53 3 56 3 1 16 78 105 -8.296 -0.064 -4.641 1.662 -1.833 -1.974 -1.739 D 55 53 3 56 3 0 13 76 103 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 80 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - u - - - ML 57 56 3 59 3 1 15 77 104 -8.249 -0.017 -6.903 -0.284 -0.762 -0.009 0.674 D 58 56 3 59 3 0 12 75 102 -6.630 -2.143 -0.389 IL 59 59 3 59 3 1 15 79 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 60 59 3 62 3 1 14 76 103 -8.249 -0.412 -2.029 -1.412 -0.956 -2.157 1.528 D 61 59 3 62 3 0 12 74 101 -6.630 -2.143 -0.389 IL 62 62 3 62 3 1 15 78 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 63 62 3 65 3 1 15 76 103 -1.645 -0.579 -6.513 0.284 -0.574 -0.763 0.605 D 64 62 3 65 3 0 11 73 100 -8.188 -0.270 -2.579 IL 65 65 3 65 3 1 14 76 103 -1.198 -0.890 -5.361 0.000 0.000 0.000 0.000 [ MATL 18 ] 22 - A - - - ML 66 65 3 68 3 1 14 73 100 -8.296 -0.016 -6.950 1.065 -0.727 -1.047 -0.287 D 67 65 3 68 3 0 8 71 98 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 13 74 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 23 - c - - - ML 69 68 3 71 3 1 13 72 99 -8.296 -0.016 -6.950 0.033 0.247 -0.136 -0.183 D 70 68 3 71 3 0 7 70 97 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 12 73 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 24 - a - - - ML 72 71 3 74 3 1 12 71 98 -8.296 -0.016 -6.950 0.475 0.197 -1.037 -0.034 D 73 71 3 74 3 0 6 69 96 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 72 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - u - - - ML 75 74 3 77 3 1 11 70 97 -8.296 -0.016 -6.950 0.426 -0.385 -1.135 0.522 D 76 74 3 77 3 0 6 68 95 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 71 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - u - - - ML 78 77 3 80 3 1 11 69 96 -8.296 -0.048 -5.086 0.443 -1.010 -1.262 0.788 D 79 77 3 80 3 0 5 67 94 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 70 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - u - - - ML 81 80 3 83 3 1 11 68 95 -8.265 -0.017 -6.919 0.135 0.176 -0.954 0.329 D 82 80 3 83 3 0 4 66 93 -6.494 -2.007 -0.434 IL 83 83 3 83 3 1 9 69 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - U - - - ML 84 83 3 86 3 1 10 67 94 -8.265 -0.017 -6.919 -2.056 -1.955 -2.813 1.748 D 85 83 3 86 3 0 4 65 92 -6.494 -2.007 -0.434 IL 86 86 3 86 3 1 9 68 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - G - - - ML 87 86 3 89 3 1 9 66 93 -8.265 -0.017 -6.919 -1.340 -2.898 1.710 -2.321 D 88 86 3 89 3 0 3 64 91 -6.494 -1.159 -0.886 IL 89 89 3 89 3 1 8 67 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - A - - - ML 90 89 3 92 3 1 8 65 92 -8.296 -0.016 -6.950 1.830 -3.043 -2.610 -2.654 D 91 89 3 92 3 0 2 63 90 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 66 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - C - - - ML 93 92 3 95 3 1 8 64 91 -4.830 -0.064 -6.950 -2.553 1.786 -3.380 -1.809 D 94 92 3 95 3 0 1 62 89 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 65 92 -1.571 -0.709 -4.271 0.000 0.000 0.000 0.000 [ MATL 28 ] 33 - U - - - ML 96 95 3 98 3 1 7 63 90 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 97 95 3 98 3 0 0 61 88 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 64 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 34 - U - - - ML 99 98 3 101 3 1 6 62 89 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 100 98 3 101 3 0 0 60 87 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 63 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 35 - U - - - ML 102 101 3 104 3 1 6 61 88 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 103 101 3 104 3 0 0 59 86 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 62 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 36 - C - - - ML 105 104 3 107 3 1 5 60 87 -8.296 -0.016 -6.950 -2.553 1.786 -3.380 -1.809 D 106 104 3 107 3 0 0 58 85 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 61 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 37 - G - - - ML 108 107 3 110 3 1 5 59 86 -8.296 -0.016 -6.950 -1.397 -2.968 1.723 -2.392 D 109 107 3 110 3 0 0 57 84 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 3 60 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 38 - U - - - ML 111 110 3 113 3 1 4 58 85 -8.296 -0.016 -6.950 -1.096 -1.441 -2.090 1.550 D 112 110 3 113 3 0 0 56 83 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 59 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 39 - U - - - ML 114 113 3 116 3 1 4 57 84 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 115 113 3 116 3 0 0 55 82 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 58 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 40 - C - - - ML 117 116 3 119 3 1 3 56 83 -8.296 -0.016 -6.950 -2.553 1.786 -3.380 -1.809 D 118 116 3 119 3 0 0 54 81 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 57 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 41 - U - - - ML 120 119 3 122 3 1 3 55 82 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 121 119 3 122 3 0 0 53 80 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 56 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 42 - U - - - ML 123 122 3 125 3 1 2 54 81 -8.296 -0.016 -6.950 -1.193 -1.482 -2.151 1.575 D 124 122 3 125 3 0 0 52 79 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 55 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 43 - C - - - ML 126 125 3 128 3 1 2 53 80 -8.296 -0.016 -6.950 -2.553 1.786 -3.380 -1.809 D 127 125 3 128 3 0 0 51 78 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 54 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 44 - U - - - ML 129 128 3 131 3 1 2 52 79 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 130 128 3 131 3 0 0 50 77 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 53 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - G - - - ML 132 131 3 134 3 1 1 51 78 -8.296 -0.016 -6.950 -2.269 -3.583 1.840 -2.967 D 133 131 3 134 3 0 0 49 76 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 52 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - A - - - ML 135 134 3 137 3 1 1 50 77 -8.296 -0.016 -6.950 1.830 -3.043 -2.610 -2.654 D 136 134 3 137 3 0 0 48 75 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 51 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 47 - G - - - ML 138 137 3 140 3 1 1 49 76 -8.296 -0.016 -6.950 -1.281 -2.541 1.641 -1.753 D 139 137 3 140 3 0 0 47 74 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 50 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 48 - U - - - ML 141 140 3 143 3 1 1 48 75 -8.296 -0.016 -6.950 -0.551 -0.451 -1.559 1.168 D 142 140 3 143 3 0 0 46 73 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 49 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 49 - U - - - ML 144 143 3 146 3 1 1 47 74 -8.296 -0.016 -6.950 -0.970 -0.594 -1.500 1.307 D 145 143 3 146 3 0 0 45 72 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 48 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 50 - U - - - ML 147 146 3 149 3 1 1 46 73 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 148 146 3 149 3 0 0 44 71 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 47 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 51 - G - - - ML 150 149 3 152 3 1 1 45 72 -8.296 -0.016 -6.950 -0.463 -2.308 1.472 -1.744 D 151 149 3 152 3 0 0 42 69 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 46 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 52 - C - - - ML 153 152 3 155 3 1 1 44 71 -3.931 -0.110 -6.950 -0.857 1.251 -1.950 -0.306 D 154 152 3 155 3 0 0 40 67 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 47 74 -0.985 -1.119 -4.861 0.000 0.000 0.000 0.000 [ MATL 48 ] 57 - U - - - ML 156 155 3 158 3 1 1 37 56 -8.296 -0.016 -6.950 -2.116 -2.005 -2.875 1.759 D 157 155 3 158 3 0 0 36 55 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 58 - G - - - ML 159 158 3 161 3 1 1 36 55 -8.296 -0.016 -6.950 -2.269 -3.583 1.840 -2.967 D 160 158 3 161 3 0 0 35 54 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 59 - A - - - ML 162 161 3 164 3 1 1 35 54 -8.296 -0.016 -6.950 1.830 -3.043 -2.610 -2.654 D 163 161 3 164 3 0 0 34 53 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 60 - A - - - ML 165 164 3 167 3 1 1 34 53 -8.296 -0.016 -6.950 1.830 -3.043 -2.610 -2.654 D 166 164 3 167 3 0 0 33 52 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 61 - G - - - ML 168 167 3 170 3 1 1 33 52 -8.296 -0.016 -6.950 -1.410 -2.064 1.641 -1.914 D 169 167 3 170 3 0 0 32 51 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 62 - C - - - ML 171 170 3 173 3 1 1 32 51 -8.296 -0.016 -6.950 -2.553 1.786 -3.380 -1.809 D 172 170 3 173 3 0 0 31 50 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 63 - C - - - ML 174 173 3 176 3 1 1 31 50 -4.266 -0.089 -6.950 -1.231 1.464 -2.288 -0.713 D 175 173 3 176 3 0 0 29 48 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 32 51 -1.634 -0.671 -4.334 0.000 0.000 0.000 0.000 [ MATL 55 ] 65 - A - - - ML 177 176 3 179 3 1 1 29 48 -8.296 -0.016 -6.950 1.830 -3.043 -2.610 -2.654 D 178 176 3 179 3 0 0 28 47 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 66 - u - - - ML 180 179 3 182 3 1 1 28 47 -8.296 -0.016 -6.950 -0.098 -0.224 0.067 0.216 D 181 179 3 182 3 0 0 27 46 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 67 - A - - - ML 183 182 3 185 3 1 1 27 46 -4.471 -0.079 -6.950 1.217 -1.004 -0.861 -0.676 D 184 182 3 185 3 0 0 26 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 29 47 -1.608 -0.686 -4.309 0.000 0.000 0.000 0.000 [ MATL 58 ] 69 - U - - - ML 186 185 3 188 3 1 1 26 45 -8.296 -0.016 -6.950 -1.610 -1.241 -2.354 1.611 D 187 185 3 188 3 0 0 25 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 28 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 70 - u - - - ML 189 188 3 191 3 1 1 25 43 -8.296 -0.016 -6.950 -0.223 -0.723 0.073 0.571 D 190 188 3 191 3 0 0 24 43 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 71 - u - - - ML 192 191 3 194 3 1 1 24 42 -8.296 -0.016 -6.950 -0.460 0.407 -0.885 0.491 D 193 191 3 194 3 0 0 23 42 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 72 - c - - - ML 195 194 3 197 3 1 1 22 41 -8.296 -0.016 -6.950 0.234 0.293 -1.219 0.226 D 196 194 3 197 3 0 0 22 40 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 73 - a - - - ML 198 197 3 200 3 1 1 21 40 -8.296 -0.016 -6.950 0.417 -0.998 0.062 0.164 D 199 197 3 200 3 0 0 20 39 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 74 - u - - - ML 201 200 3 203 3 1 1 20 39 -4.897 -0.061 -6.950 -0.038 -0.813 0.043 0.512 D 202 200 3 203 3 0 0 19 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 40 -1.565 -0.713 -4.265 0.000 0.000 0.000 0.000 [ MATL 64 ] 76 - U - - - ML 204 203 3 206 3 1 1 19 37 -8.296 -0.016 -6.950 -0.208 -0.604 -1.077 1.002 D 205 203 3 206 3 0 0 18 37 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 77 - c - - - ML 207 206 3 209 3 1 1 17 36 -8.296 -0.016 -6.950 -0.049 0.505 -1.051 0.178 D 208 206 3 209 3 0 0 17 36 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 78 - C - - - ML 210 209 3 212 3 1 1 16 34 -8.296 -0.016 -6.950 -1.928 1.614 -2.778 -0.917 D 211 209 3 212 3 0 0 16 34 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 79 - U - - - ML 213 212 3 215 3 1 1 15 33 -8.296 -0.016 -6.950 -0.794 -1.192 -1.346 1.374 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 80 - G - - - ML 216 215 3 218 3 1 1 13 31 -8.296 -0.016 -6.950 -1.237 -2.851 1.692 -2.280 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 81 - A - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 1.688 -2.401 -1.566 -1.989 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD59 ACC RF00273 DESC Small nucleolar RNA SNORD59 LENG 73 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:29:38 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 24 EFFN 3.190430 CKSUM 4037578250 STATS LOCAL MSV -8.4785 0.71872 STATS LOCAL VITERBI -9.4543 0.71872 STATS LOCAL FORWARD -3.9512 0.71872 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.40977 1.56088 1.51801 1.11870 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 0.00000 * 1 1.86280 0.86211 1.91965 1.28796 1 c - - < 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 2 3.21838 0.27050 3.03074 1.90579 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 3 2.61770 1.87770 2.41564 0.37866 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.32031 4.14848 1.35368 1.46634 0.26236 1.09861 0.40547 4 2.45284 2.44388 2.96322 0.25428 4 U - - - 1.38629 1.38629 1.38629 1.38629 0.08203 2.84887 3.87075 0.61025 0.78354 0.11534 2.21700 5 2.88870 0.43976 2.67295 1.46485 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 6 1.08170 1.84510 1.60028 1.20021 7 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 7 1.29476 1.40119 1.42045 1.43494 8 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 8 2.96278 2.86815 3.49205 0.14956 9 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 9 3.07055 3.99381 0.09777 3.56437 10 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 10 0.10426 3.60949 3.29895 3.35189 11 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 11 2.57779 2.28176 3.09486 0.25274 12 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 12 2.46116 2.90015 0.22263 2.82623 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 13 0.21720 2.70198 2.82776 2.67340 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06808 4.14848 2.99522 1.46634 0.26236 1.09861 0.40547 14 1.60077 1.93261 1.38156 0.91055 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03324 4.11365 4.11365 1.46634 0.26236 1.64259 0.21503 15 2.43918 2.08196 2.95655 0.30641 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.33782 4.11365 1.30812 1.46634 0.26236 1.64259 0.21503 16 1.18719 1.79526 1.92606 0.95941 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.49481 0.99859 3.82065 0.71139 0.67524 0.10159 2.33719 17 0.63134 1.90204 2.14027 1.60328 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 18 1.37237 1.20029 1.47343 1.53132 23 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 19 1.05186 1.23638 2.12780 1.42221 24 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 20 1.08483 1.65745 2.19674 1.02095 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 21 1.07295 2.12065 2.29481 0.82721 26 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05599 4.14848 3.25294 1.46634 0.26236 1.09861 0.40547 22 1.29455 1.25257 2.06395 1.16073 27 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03285 4.12535 4.12535 1.46634 0.26236 1.49261 0.25462 23 2.91997 2.83228 3.44803 0.15621 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03285 4.12535 4.12535 1.46634 0.26236 1.49261 0.25462 24 2.37700 3.49083 0.18466 3.09429 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03285 4.12535 4.12535 1.46634 0.26236 0.59706 0.79946 25 0.10426 3.60949 3.29895 3.35189 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 26 3.29222 0.13010 3.86050 2.75255 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.06808 2.99522 4.14848 0.54372 0.86889 1.09861 0.40547 27 2.96278 2.86815 3.49205 0.14956 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 28 2.96278 2.86815 3.49205 0.14956 34 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 29 2.96278 2.86815 3.49205 0.14956 35 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 30 3.29222 0.13010 3.86050 2.75255 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 31 2.41737 3.54006 0.17586 3.14429 37 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 32 2.19938 2.44767 2.91014 0.29013 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 33 2.96278 2.86815 3.49205 0.14956 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 34 3.29222 0.13010 3.86050 2.75255 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 35 2.96278 2.86815 3.49205 0.14956 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 36 2.27072 2.47720 2.95440 0.27355 42 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 37 3.29222 0.13010 3.86050 2.75255 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 38 2.96278 2.86815 3.49205 0.14956 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 39 3.07055 3.99381 0.09777 3.56437 45 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 40 0.10426 3.60949 3.29895 3.35189 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 41 2.33301 3.22302 0.23144 2.66248 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 42 1.79559 1.70898 2.51197 0.55894 48 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 43 2.11332 1.81577 2.46765 0.45939 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 44 2.96278 2.86815 3.49205 0.14956 50 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 45 1.73322 3.06021 0.34603 2.67483 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 46 2.02385 0.49379 2.80433 1.62456 52 C - - _ 1.38629 1.38629 1.38629 1.38629 0.10353 2.49418 4.14848 1.29240 0.32105 1.09861 0.40547 47 2.96278 2.86815 3.49205 0.14956 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 48 3.07055 3.99381 0.09777 3.56437 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 49 0.10426 3.60949 3.29895 3.35189 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 50 0.10426 3.60949 3.29895 3.35189 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 51 2.44217 2.86408 0.22906 2.80158 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 52 3.29222 0.13010 3.86050 2.75255 62 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 53 2.30225 0.34603 3.05591 1.92829 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.08752 2.68802 4.14848 0.41329 1.08315 1.09861 0.40547 54 0.10426 3.60949 3.29895 3.35189 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 55 1.46525 1.53813 1.32845 1.24026 66 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 56 0.52504 2.10053 2.00476 1.88794 67 A - - _ 1.38629 1.38629 1.38629 1.38629 0.07951 2.80270 4.14848 0.45818 1.00085 1.09861 0.40547 57 2.58295 2.29115 3.10003 0.25071 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 58 1.55574 1.90282 1.32304 0.98485 70 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 59 1.73048 1.08666 2.01219 1.04480 71 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 60 1.22448 1.16769 2.26146 1.23510 72 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 61 1.09438 2.10206 1.33514 1.27323 73 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 62 1.42056 1.96812 1.34590 1.02611 74 u - - _ 1.38629 1.38629 1.38629 1.38629 0.06626 3.02977 4.14848 0.56054 0.84606 1.09861 0.40547 63 1.54114 1.81971 2.15122 0.67836 76 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 64 1.42900 1.01747 2.13556 1.27024 77 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 65 2.82432 0.24517 3.41584 2.07759 78 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 66 1.98058 2.26373 2.35568 0.41065 79 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 67 2.29944 3.45452 0.19686 3.06240 80 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 68 0.20077 3.13134 2.51461 2.85866 81 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 69 1.86949 2.84516 0.33109 2.66599 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 70 0.28809 2.91462 2.09786 2.61234 83 A - - - 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 71 0.50138 2.59024 1.64231 2.07329 84 A - - > 1.38629 1.38629 1.38629 1.38629 0.03209 4.14848 4.14848 1.46634 0.26236 1.09861 0.40547 72 2.36066 3.21645 0.20229 3.02227 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.07566 4.14848 2.86330 1.46634 0.26236 1.09861 0.40547 73 1.42947 2.09111 0.72809 1.86960 86 g - - > 1.38629 1.38629 1.38629 1.38629 0.01689 4.08971 * 1.46634 0.26236 0.00000 * //