INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD57 ACC RF00274 DESC Small nucleolar RNA SNORD57 STATES 220 NODES 71 CLEN 72 W 99 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:29:41 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 23 EFFN 3.102417 CKSUM 2347476636 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 47.10 NC 46.80 EFP7GF -9.8117 0.71873 ECMLC 0.68417 -6.19503 2.38551 1600000 425343 0.002821 ECMGC 0.40301 -18.75209 -5.04775 1600000 100148 0.003994 ECMLI 0.64701 -4.04623 4.50896 1600000 304171 0.003945 ECMGI 0.44536 -12.15242 -0.67004 1600000 66517 0.006014 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 99 132 -7.363 -7.570 -0.068 -4.840 IL 1 1 2 1 4 1 30 101 135 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 29 101 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 5 1 30 99 133 -7.415 -0.031 -7.230 -7.442 -8.334 -0.979 -0.944 -1.246 1.351 D 4 2 3 5 5 0 23 97 131 -5.127 -0.971 -4.388 -2.763 -1.910 IL 5 5 3 5 5 1 28 99 133 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 94 G C - - MP 6 5 3 10 6 2 30 98 132 -9.268 -9.207 -0.019 -7.983 -8.263 -8.658 -4.462 -3.050 -4.417 0.392 -4.715 -4.611 0.455 -4.734 -4.313 3.487 -4.623 -0.747 -0.501 -4.192 -2.111 -3.336 ML 7 5 3 10 6 1 25 96 130 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 24 96 130 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 21 93 127 -9.269 -7.967 -3.764 -4.446 -4.464 -0.270 IL 10 10 5 10 6 1 27 97 131 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 27 97 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 93 g c - - MP 12 11 6 16 6 2 28 96 130 -9.268 -9.207 -0.019 -7.983 -8.263 -8.658 -3.559 -2.709 -3.487 0.908 -3.455 -4.141 1.263 -3.725 -3.692 2.901 -4.064 -0.451 0.777 -3.487 -0.242 -2.437 ML 13 11 6 16 6 1 25 95 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 23 94 128 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 20 92 125 -9.269 -7.967 -3.764 -4.446 -4.464 -0.270 IL 16 16 5 16 6 1 26 95 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 26 95 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 92 A U - - MP 18 17 6 22 4 2 27 94 128 -7.335 -7.542 -0.040 -5.956 -4.149 -3.038 -4.189 3.487 -4.965 -5.903 -0.605 -4.262 -4.027 1.068 -4.608 -0.448 -0.918 -4.919 -2.536 -2.975 ML 19 17 6 22 4 1 24 93 127 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 21 93 126 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 20 91 125 -4.775 -4.456 -2.472 -0.439 IL 22 22 5 22 4 1 25 94 128 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 25 94 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 24 23 6 26 3 1 25 92 126 -8.327 -0.016 -6.981 0.156 -1.212 0.839 -0.587 D 25 23 6 26 3 0 19 90 123 -6.460 -1.973 -0.446 IL 26 26 3 26 3 1 24 93 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 27 26 3 29 3 1 24 91 125 -8.327 -0.016 -6.981 0.762 -1.751 0.647 -1.180 D 28 26 3 29 3 0 19 89 122 -6.460 -1.973 -0.446 IL 29 29 3 29 3 1 23 92 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 30 29 3 32 3 1 23 90 124 -8.327 -0.016 -6.981 -1.378 -1.452 -1.828 1.570 D 31 29 3 32 3 0 18 88 121 -6.460 -1.973 -0.446 IL 32 32 3 32 3 1 23 91 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 33 32 3 35 3 1 23 89 123 -8.327 -0.016 -6.981 -1.735 -3.242 1.780 -2.657 D 34 32 3 35 3 0 18 87 120 -6.460 -1.973 -0.446 IL 35 35 3 35 3 1 22 90 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 36 35 3 38 3 1 22 88 122 -8.327 -0.016 -6.981 1.838 -3.105 -2.666 -2.723 D 37 35 3 38 3 0 17 86 119 -6.460 -1.973 -0.446 IL 38 38 3 38 3 1 21 89 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 39 38 3 41 3 1 21 87 121 -8.327 -0.016 -6.981 -1.293 -1.403 -1.649 1.533 D 40 38 3 41 3 0 17 85 119 -6.460 -1.203 -0.851 IL 41 41 3 41 3 1 20 88 121 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 42 41 3 44 3 1 20 86 120 -8.353 -0.016 -7.007 -2.381 -3.708 1.854 -3.089 D 43 41 3 44 3 0 16 84 118 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 19 87 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 45 44 3 47 3 1 19 85 119 -8.353 -0.095 -4.046 1.682 -2.244 -2.104 -1.525 D 46 44 3 47 3 0 15 83 117 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 19 86 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - a - - - ML 48 47 3 50 3 1 19 84 118 -8.275 -0.017 -6.929 0.772 -1.225 0.137 -0.387 D 49 47 3 50 3 0 14 82 116 -6.887 -0.788 -1.278 IL 50 50 3 50 3 1 18 85 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - C - - - ML 51 50 3 53 3 1 18 83 117 -8.353 -0.016 -7.007 -0.503 1.059 -1.173 -0.382 D 52 50 3 53 3 0 13 81 115 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 17 84 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - u - - - ML 54 53 3 56 3 1 17 82 116 -8.353 -0.016 -7.007 -0.127 -0.204 -0.481 0.584 D 55 53 3 56 3 0 12 80 114 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 16 83 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - a - - - ML 57 56 3 59 3 1 16 81 115 -8.353 -0.042 -5.303 0.322 -0.687 0.309 -0.167 D 58 56 3 59 3 0 11 79 113 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 16 82 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - u - - - ML 60 59 3 62 3 1 16 80 114 -8.328 -0.016 -6.982 -0.311 -0.086 -1.013 0.813 D 61 59 3 62 3 0 10 78 112 -6.452 -1.213 -0.844 IL 62 62 3 62 3 1 15 81 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - c - - - ML 63 62 3 65 3 1 15 79 113 -5.317 -0.048 -7.007 -0.863 0.956 -1.384 0.173 D 64 62 3 65 3 0 9 77 110 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 14 80 113 -1.535 -0.732 -4.235 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - U - - - ML 66 65 3 68 3 1 15 78 112 -2.676 -0.259 -7.007 -1.526 -0.968 -2.273 1.553 D 67 65 3 68 3 0 9 75 109 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 14 79 112 -1.156 -0.936 -5.137 0.000 0.000 0.000 0.000 [ MATL 20 ] 25 - u - - - ML 69 68 3 71 3 1 14 76 110 -3.933 -0.110 -7.007 -0.506 -0.243 -0.790 0.905 D 70 68 3 71 3 0 8 74 107 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 13 78 111 -1.070 -1.037 -4.792 0.000 0.000 0.000 0.000 [ MATL 21 ] 29 - a - - - ML 72 71 3 74 3 1 13 75 108 -8.353 -0.016 -7.007 0.741 -0.733 -0.161 -0.264 D 73 71 3 74 3 0 7 73 106 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 12 76 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 30 - g - - - ML 75 74 3 77 3 1 12 74 107 -8.353 -0.016 -7.007 -0.226 -0.413 0.652 -0.283 D 76 74 3 77 3 0 7 72 105 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 11 75 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 31 - C - - - ML 78 77 3 80 3 1 11 73 106 -8.353 -0.016 -7.007 -2.690 1.805 -3.512 -1.922 D 79 77 3 80 3 0 6 71 104 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 10 74 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 32 - C - - - ML 81 80 3 83 3 1 10 72 105 -8.353 -0.016 -7.007 -2.690 1.805 -3.512 -1.922 D 82 80 3 83 3 0 5 70 103 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 10 73 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 33 - U - - - ML 84 83 3 86 3 1 10 71 104 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 85 83 3 86 3 0 5 69 102 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 9 72 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 34 - G - - - ML 87 86 3 89 3 1 9 70 103 -8.353 -0.016 -7.007 -2.381 -3.708 1.854 -3.089 D 88 86 3 89 3 0 4 68 101 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 8 71 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 35 - A - - - ML 90 89 3 92 3 1 8 69 102 -8.353 -0.016 -7.007 1.844 -3.157 -2.714 -2.780 D 91 89 3 92 3 0 4 67 100 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 70 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 36 - C - - - ML 93 92 3 95 3 1 7 68 101 -8.353 -0.084 -4.228 -1.171 1.408 -2.230 -0.539 D 94 92 3 95 3 0 3 66 99 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 7 69 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 37 - C - - - ML 96 95 3 98 3 1 7 67 100 -8.286 -0.016 -6.940 -0.995 1.199 -1.341 -0.307 D 97 95 3 98 3 0 2 65 98 -6.808 -2.321 -0.338 IL 98 98 3 98 3 1 6 68 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 38 - U - - - ML 99 98 3 101 3 1 6 66 99 -8.286 -0.016 -6.940 -0.853 -0.350 -1.706 1.236 D 100 98 3 101 3 0 2 64 98 -6.808 -0.847 -1.200 IL 101 101 3 101 3 1 5 67 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 39 - U - - - ML 102 101 3 104 3 1 5 65 98 -5.216 -0.090 -4.897 -1.026 -0.490 -1.616 1.305 D 103 101 3 104 3 0 1 63 96 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 5 66 99 -1.543 -0.728 -4.243 0.000 0.000 0.000 0.000 [ MATL 32 ] 41 - g - - - ML 105 104 3 107 3 1 5 64 97 -8.315 -0.016 -6.969 -0.238 -0.161 0.655 -0.549 D 106 104 3 107 3 0 0 62 95 -6.566 -2.079 -0.410 IL 107 107 3 107 3 1 4 65 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 42 - u - - - ML 108 107 3 110 3 1 4 63 96 -8.315 -0.069 -4.531 0.083 -0.201 -1.229 0.717 D 109 107 3 110 3 0 0 61 95 -6.566 -1.075 -0.958 IL 110 110 3 110 3 1 4 64 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 43 - a - - - ML 111 110 3 113 3 1 4 62 95 -8.303 -0.016 -6.957 0.625 -0.888 -0.053 -0.068 D 112 110 3 113 3 0 0 60 93 -6.676 -2.189 -0.375 IL 113 113 3 113 3 1 3 63 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 44 - g - - - ML 114 113 3 116 3 1 3 61 94 -8.303 -0.048 -5.094 0.564 -1.774 0.843 -1.199 D 115 113 3 116 3 0 0 59 92 -6.676 -2.189 -0.375 IL 116 116 3 116 3 1 3 62 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 45 - A - - - ML 117 116 3 119 3 1 3 60 93 -8.272 -0.017 -6.926 1.134 -0.831 -0.983 -0.439 D 118 116 3 119 3 0 0 58 92 -6.909 -0.772 -1.301 IL 119 119 3 119 3 1 2 61 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 46 - g - - - ML 120 119 3 122 3 1 2 59 92 -8.353 -0.050 -5.009 -0.133 -0.859 0.894 -0.558 D 121 119 3 122 3 0 0 57 90 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 60 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 47 - U - - - ML 123 122 3 125 3 1 2 58 91 -8.319 -0.016 -6.973 -0.348 -1.193 -1.658 1.299 D 124 122 3 125 3 0 0 56 89 -6.532 -2.045 -0.421 IL 125 125 3 125 3 1 1 59 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 48 - G - - - ML 126 125 3 128 3 1 1 57 90 -8.319 -0.063 -4.667 -1.433 -2.418 1.610 -1.359 D 127 125 3 128 3 0 0 55 88 -6.532 -2.045 -0.421 IL 128 128 3 128 3 1 1 58 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 49 - G - - - ML 129 128 3 131 3 1 2 56 90 -8.273 -0.017 -6.927 -1.431 -2.973 1.728 -2.394 D 130 128 3 131 3 0 0 54 87 -6.899 -2.412 -0.315 IL 131 131 3 131 3 1 1 57 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 50 - A - - - ML 132 131 3 134 3 1 2 55 89 -8.273 -0.017 -6.927 1.387 -1.857 -0.479 -1.358 D 133 131 3 134 3 0 0 53 87 -6.899 -0.779 -1.291 IL 134 134 3 134 3 1 1 56 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 51 - G - - - ML 135 134 3 137 3 1 1 54 88 -8.353 -0.016 -7.007 -0.760 -2.162 1.488 -1.388 D 136 134 3 137 3 0 0 52 85 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 55 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 52 - G - - - ML 138 137 3 140 3 1 1 53 87 -8.353 -0.055 -4.867 -2.381 -3.708 1.854 -3.089 D 139 137 3 140 3 0 0 51 84 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 54 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 53 - C - - - ML 141 140 3 143 3 1 1 52 86 -3.506 -0.146 -6.968 -0.836 1.054 -0.667 -0.445 D 142 140 3 143 3 0 0 49 83 -6.575 -2.088 -0.407 IL 143 143 3 143 3 1 1 53 87 -1.120 -0.985 -4.852 0.000 0.000 0.000 0.000 [ MATL 45 ] 58 - A - - - ML 144 143 3 146 3 1 1 51 84 -8.314 -0.165 -3.248 1.157 -1.027 -0.872 -0.447 D 145 143 3 146 3 0 0 48 82 -6.575 -2.088 -0.407 IL 146 146 3 146 3 1 1 52 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 59 - A - - - ML 147 146 3 149 3 1 1 50 83 -8.167 -0.131 -3.588 1.482 -1.662 -1.611 -0.826 D 148 146 3 149 3 0 0 47 81 -7.477 -2.990 -0.203 IL 149 149 3 149 3 1 1 51 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 60 - A - - - ML 150 149 3 152 3 1 1 49 82 -3.743 -0.127 -6.709 1.021 -0.652 -1.122 -0.194 D 151 149 3 152 3 0 0 47 80 -7.878 -0.343 -2.270 IL 152 152 3 152 3 1 1 51 84 -0.928 -1.181 -4.909 0.000 0.000 0.000 0.000 [ MATL 48 ] 65 - A - - - ML 153 152 3 155 3 1 1 47 81 -8.353 -0.016 -7.007 1.599 -1.982 -1.915 -1.147 D 154 152 3 155 3 0 0 44 78 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 48 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 66 - A - - - ML 156 155 3 158 3 1 1 46 80 -3.933 -0.110 -7.007 1.101 -0.579 -1.319 -0.349 D 157 155 3 158 3 0 0 42 76 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 50 84 -0.790 -1.349 -5.105 0.000 0.000 0.000 0.000 [ MATL 50 ] 72 - A - - - ML 159 158 3 161 3 1 1 34 53 -8.353 -0.040 -5.356 1.844 -3.157 -2.714 -2.780 D 160 158 3 161 3 0 0 33 52 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 73 - A - - - ML 162 161 3 164 3 1 1 33 52 -8.329 -0.016 -6.983 1.289 -1.454 -0.843 -0.656 D 163 161 3 164 3 0 0 32 51 -6.439 -1.230 -0.831 IL 164 164 3 164 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 74 - C - - - ML 165 164 3 167 3 1 1 32 51 -8.353 -0.016 -7.007 -2.000 1.626 -2.854 -0.932 D 166 164 3 167 3 0 0 31 50 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 75 - U - - - ML 168 167 3 170 3 1 1 31 50 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 169 167 3 170 3 0 0 30 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 76 - G - - - ML 171 170 3 173 3 1 1 30 49 -8.353 -0.016 -7.007 -2.381 -3.708 1.854 -3.089 D 172 170 3 173 3 0 0 29 48 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 77 - A - - - ML 174 173 3 176 3 1 1 29 48 -8.353 -0.016 -7.007 1.706 -2.488 -1.620 -2.090 D 175 173 3 176 3 0 0 28 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 78 - U - - - ML 177 176 3 179 3 1 1 28 47 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 178 176 3 179 3 0 0 27 46 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 79 - U - - - ML 180 179 3 182 3 1 1 27 45 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 181 179 3 182 3 0 0 26 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 80 - U - - - ML 183 182 3 185 3 1 1 25 44 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 184 182 3 185 3 0 0 24 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 81 - A - - - ML 186 185 3 188 3 1 1 24 43 -8.353 -0.016 -7.007 1.844 -3.157 -2.714 -2.780 D 187 185 3 188 3 0 0 23 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 82 - A - - - ML 189 188 3 191 3 1 1 23 42 -8.353 -0.016 -7.007 1.844 -3.157 -2.714 -2.780 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 83 - U - - - ML 192 191 3 194 3 1 1 22 41 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 84 - G - - - ML 195 194 3 197 3 1 1 21 40 -8.353 -0.016 -7.007 -2.381 -3.708 1.854 -3.089 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 85 - A - - - ML 198 197 3 200 3 1 1 20 38 -8.353 -0.016 -7.007 1.844 -3.157 -2.714 -2.780 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 86 - G - - - ML 201 200 3 203 3 1 1 18 37 -8.353 -0.016 -7.007 -2.381 -3.708 1.854 -3.089 D 202 200 3 203 3 0 0 18 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 87 - C - - - ML 204 203 3 206 3 1 1 17 36 -8.353 -0.016 -7.007 -1.741 1.599 -2.045 -1.219 D 205 203 3 206 3 0 0 17 35 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 88 - C - - - ML 207 206 3 209 3 1 1 16 34 -8.353 -0.016 -7.007 -2.690 1.805 -3.512 -1.922 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 89 - U - - - ML 210 209 3 212 3 1 1 14 33 -8.353 -0.016 -7.007 -2.226 -2.097 -2.988 1.777 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 90 - G - - - ML 213 212 3 215 3 1 1 13 31 -8.353 -0.016 -7.007 -1.471 -3.073 1.741 -2.500 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 91 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.844 -3.157 -2.714 -2.780 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD57 ACC RF00274 DESC Small nucleolar RNA SNORD57 LENG 72 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:29:41 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 23 EFFN 3.377563 CKSUM 2347476636 STATS LOCAL MSV -8.3204 0.71873 STATS LOCAL VITERBI -9.2489 0.71873 STATS LOCAL FORWARD -3.6290 0.71873 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24693 1.63944 1.37361 1.32676 1.38629 1.38629 1.38629 1.38629 0.05036 4.21313 3.37223 1.46634 0.26236 0.00000 * 1 2.11693 2.07232 2.27592 0.42924 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 2 2.37476 2.39844 0.28671 2.72768 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 3 1.98988 1.82975 0.63852 1.74435 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 4 0.30877 3.14655 1.75565 2.99868 4 A - - < 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 5 1.28648 2.25353 0.78348 1.82067 5 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 6 0.84730 2.65842 0.92213 2.26624 6 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 7 2.41145 2.45164 2.70470 0.27803 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 8 2.65937 3.73052 0.13914 3.32639 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 9 0.10051 3.64407 3.33053 3.39000 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 10 2.35026 2.41582 2.57300 0.30238 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 0.62200 0.76975 11 3.13959 4.07020 0.09065 3.63856 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 12 0.20560 3.00839 2.91640 2.49684 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09053 4.21313 2.63457 1.46634 0.26236 1.09861 0.40547 13 0.84243 2.26477 1.28212 1.67112 13 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03189 4.15449 4.15449 1.46634 0.26236 0.34539 1.23080 14 1.76216 0.62845 2.22320 1.67855 14 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 15 1.48243 1.52592 1.71853 0.97773 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 16 1.16422 1.87018 1.15964 1.51349 16 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04976 4.21313 3.38894 1.46634 0.26236 1.09861 0.40547 17 1.61587 1.44123 2.10232 0.81537 17 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03064 4.19400 4.19400 1.46634 0.26236 0.62977 0.76081 18 2.02773 0.70152 2.37631 1.27425 18 c - - _ 1.38629 1.38629 1.38629 1.38629 0.05486 3.25505 4.21313 0.64518 0.74353 1.09861 0.40547 19 2.51556 2.08651 3.03463 0.29173 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.21713 1.71273 4.21313 0.80691 0.59102 1.09861 0.40547 20 1.76038 1.55442 1.94086 0.74839 25 u - - _ 1.38629 1.38629 1.38629 1.38629 0.10201 2.49884 4.21313 1.14907 0.38116 1.09861 0.40547 21 0.86459 1.90291 1.49550 1.58229 29 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 22 1.56246 1.67248 0.91280 1.60346 30 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 23 3.37670 0.11993 3.94070 2.82301 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 24 3.37670 0.11993 3.94070 2.82301 32 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 25 3.03204 2.92631 3.56316 0.13945 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 26 3.13959 4.07020 0.09065 3.63856 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 27 0.09668 3.68100 3.36430 3.43067 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 28 2.24999 0.38764 3.00322 1.79385 36 C - - _ 1.38629 1.38629 1.38629 1.38629 0.08211 4.21313 2.74842 1.46634 0.26236 1.09861 0.40547 29 2.13048 0.52960 2.34624 1.62632 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03163 4.16265 4.16265 1.46634 0.26236 1.84471 0.17206 30 2.01783 1.63593 2.61806 0.51193 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03163 4.16265 4.16265 1.46634 0.26236 0.38000 1.15157 31 2.14964 1.73775 2.54937 0.46294 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.08684 3.20552 3.15507 0.61791 0.77451 1.09861 0.40547 32 1.57355 1.49210 0.90885 1.80300 41 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03092 4.18490 4.18490 1.46634 0.26236 1.58531 0.22927 33 1.33048 1.52420 2.26235 0.88249 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.07108 4.18490 2.93009 1.46634 0.26236 0.52724 0.89216 34 0.94743 2.01754 1.41780 1.43955 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03122 4.17532 4.17532 1.46634 0.26236 1.70605 0.20038 35 0.98900 2.67329 0.78399 2.27841 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05521 4.17532 3.26129 1.46634 0.26236 1.70605 0.20038 36 0.58452 1.97510 2.09167 1.71258 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03197 4.15208 4.15208 1.46634 0.26236 0.33639 1.25298 37 1.49675 1.99502 0.74344 1.80389 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.05628 4.21313 3.22083 1.46634 0.26236 1.09861 0.40547 38 1.64549 2.25903 2.58718 0.46617 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03083 4.18769 4.18769 1.46634 0.26236 1.54701 0.23938 39 2.45119 3.13930 0.25216 2.37116 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.06648 4.18769 3.01307 1.46634 0.26236 1.54701 0.23938 40 2.43890 3.53728 0.17398 3.13882 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03193 4.15314 4.15314 1.46634 0.26236 1.93648 0.15573 41 0.40821 2.73316 1.72101 2.39405 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03193 4.15314 4.15314 1.46634 0.26236 0.34027 1.24333 42 1.94610 2.94079 0.33817 2.39394 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 43 3.13959 4.07020 0.09065 3.63856 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.05996 4.21313 3.13736 1.46634 0.26236 1.09861 0.40547 44 2.01756 0.62790 1.85762 1.73012 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.13042 2.23456 4.18411 0.99069 0.46413 1.59579 0.22658 45 0.56914 2.11839 2.00991 1.71612 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.14580 4.18411 2.11669 1.46634 0.26236 1.59579 0.22658 46 0.34160 2.58687 2.55625 1.99132 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12237 4.07297 2.32125 1.46634 0.26236 2.47121 0.08827 47 0.66254 1.84695 2.19373 1.53600 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12223 2.33792 3.98836 1.39664 0.28426 0.12837 2.11633 48 0.26171 2.81895 2.77803 2.22157 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 49 0.60679 1.79403 2.33897 1.64928 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10201 2.49884 4.21313 1.59379 0.22709 1.09861 0.40547 50 0.09668 3.68100 3.36430 3.43067 72 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04873 4.21313 3.41837 1.46634 0.26236 1.09861 0.40547 51 0.47754 2.43235 1.98730 1.86562 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03061 4.19500 4.19500 1.46634 0.26236 0.64363 0.74525 52 2.86696 0.23952 3.46067 2.08173 74 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 53 3.03204 2.92631 3.56316 0.13945 75 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 54 3.13959 4.07020 0.09065 3.63856 76 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 55 0.19027 3.18708 2.54862 2.92279 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 56 3.03204 2.92631 3.56316 0.13945 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 57 3.03204 2.92631 3.56316 0.13945 79 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 58 3.03204 2.92631 3.56316 0.13945 80 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 59 0.09668 3.68100 3.36430 3.43067 81 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 60 0.09668 3.68100 3.36430 3.43067 82 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 61 3.03204 2.92631 3.56316 0.13945 83 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 62 3.13959 4.07020 0.09065 3.63856 84 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 63 0.09668 3.68100 3.36430 3.43067 85 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 64 3.13959 4.07020 0.09065 3.63856 86 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 65 2.69259 0.25338 2.86094 2.31358 87 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 66 3.37670 0.11993 3.94070 2.82301 88 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 67 3.03204 2.92631 3.56316 0.13945 89 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 68 2.46265 3.60502 0.16572 3.21091 90 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03005 4.21313 4.21313 1.46634 0.26236 1.09861 0.40547 69 0.09668 3.68100 3.36430 3.43067 91 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05036 4.21313 3.37223 1.46634 0.26236 1.09861 0.40547 70 3.20645 2.01518 2.94538 0.25667 92 U - - > 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 71 2.10718 0.70785 1.56609 1.73241 93 c - - > 1.38629 1.38629 1.38629 1.38629 0.03065 4.19342 4.19342 1.46634 0.26236 1.46290 0.26340 72 2.95799 0.32684 2.27253 2.08886 94 C - - > 1.38629 1.38629 1.38629 1.38629 0.01544 4.17821 * 1.46634 0.26236 0.00000 * //