INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD49 ACC RF00277 DESC Small nucleolar RNA SNORD49 STATES 217 NODES 73 CLEN 71 W 151 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:29:48 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 28 EFFN 4.282715 CKSUM 1905851644 NULL 0.000 0.000 0.000 0.000 GA 37.00 TC 37.10 NC 36.90 EFP7GF -10.5299 0.71871 ECMLC 0.68923 -9.33676 -0.62619 1600000 485852 0.002470 ECMGC 0.40339 -19.01252 -5.83132 1600000 81526 0.004906 ECMLI 0.61926 -8.20932 0.78396 1600000 314669 0.003814 ECMGI 0.44180 -12.12919 -0.80512 1600000 59542 0.006718 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 151 234 -7.686 -7.893 -0.032 -6.308 IL 1 1 2 1 4 1 30 153 236 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 29 153 235 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 2 29 151 234 -6.019 -0.045 -6.019 -1.135 -0.829 -0.525 1.193 D 4 2 3 5 3 0 25 148 231 -11.551 -1.585 -0.585 IL 5 5 3 5 3 2 30 158 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - G - - - ML 6 5 3 8 3 1 28 150 232 -6.019 -0.126 -3.869 -1.404 -1.869 1.397 -0.486 D 7 5 3 8 3 0 24 147 229 -11.551 -1.585 -0.585 IL 8 8 3 8 3 2 30 157 240 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 28 149 231 -5.940 -0.048 -5.940 -0.765 0.840 -0.638 -0.031 D 10 8 3 11 3 0 24 146 228 -12.652 -2.686 -0.244 IL 11 11 3 11 3 2 29 155 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 27 148 230 -5.940 -0.048 -5.940 -0.108 -0.202 -0.449 0.556 D 13 11 3 14 3 0 23 146 227 -12.652 -0.537 -1.686 IL 14 14 3 14 3 1 28 154 237 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - c - - - ML 15 14 3 17 3 1 26 146 228 -6.019 -0.045 -6.019 0.172 0.696 -0.627 -0.721 D 16 14 3 17 3 0 21 143 225 -11.551 -1.585 -0.585 IL 17 17 3 17 3 1 28 153 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 25 145 227 -6.019 -0.045 -6.019 -2.582 -2.096 -2.773 1.788 D 19 17 3 20 3 0 21 142 224 -11.551 -1.585 -0.585 IL 20 20 3 20 3 1 27 152 234 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - G - - - ML 21 20 3 23 3 1 24 144 225 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 22 20 3 23 3 0 20 141 222 -11.551 -1.585 -0.585 IL 23 23 3 23 3 1 26 150 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 23 142 224 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 25 23 3 26 3 0 19 139 221 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 25 149 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 23 141 223 -6.019 -0.045 -6.019 -2.582 -2.096 -2.773 1.788 D 28 26 3 29 3 0 18 138 219 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 24 148 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 1 22 140 221 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 31 29 3 32 3 0 18 137 218 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 23 147 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 21 139 220 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 34 32 3 35 3 0 17 136 217 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 23 145 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - a - - - ML 36 35 3 38 3 1 20 137 218 -6.019 -0.045 -6.019 0.445 -0.511 -0.505 0.301 D 37 35 3 38 3 0 16 134 215 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 22 144 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 39 38 3 41 3 1 19 136 217 -6.019 -0.096 -4.349 1.702 -2.552 -1.445 -2.266 D 40 38 3 41 3 0 16 133 214 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 21 143 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - c - - - ML 42 41 3 44 3 1 19 135 216 -5.969 -0.047 -5.969 -0.366 0.514 -1.135 0.423 D 43 41 3 44 3 0 15 132 213 -12.339 -2.373 -0.310 IL 44 44 3 44 3 1 20 142 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - c - - - ML 45 44 3 47 3 1 18 134 214 -5.969 -0.099 -4.318 -0.553 0.743 -0.650 0.011 D 46 44 3 47 3 0 15 132 212 -12.339 -0.704 -1.373 IL 47 47 3 47 3 1 20 140 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - a - - - ML 48 47 3 50 3 1 17 132 213 -5.970 -0.047 -5.970 0.593 -0.505 -0.027 -0.312 D 49 47 3 50 3 0 13 130 210 -12.328 -0.711 -1.362 IL 50 50 3 50 3 1 19 139 221 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - c - - - ML 51 50 3 53 3 1 17 131 211 -6.019 -0.045 -6.019 -0.702 0.368 0.195 -0.073 D 52 50 3 53 3 0 11 128 208 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 18 138 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - u - - - ML 54 53 3 56 3 1 16 130 210 -6.019 -0.045 -6.019 -0.133 -0.802 -0.336 0.784 D 55 53 3 56 3 0 11 126 207 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 17 137 218 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - a - - - ML 57 56 3 59 3 1 15 128 209 -6.019 -0.045 -6.019 0.836 -0.687 -0.133 -0.552 D 58 56 3 59 3 0 10 125 205 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 17 135 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - A - - - ML 60 59 3 62 3 1 15 127 207 -1.907 -0.478 -6.019 1.641 -2.383 -1.142 -2.081 D 61 59 3 62 3 0 9 123 203 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 15 128 208 -0.863 -1.151 -15.148 0.000 0.000 0.000 0.000 [ MATL 21 ] 25 - U - - - ML 63 62 3 65 3 1 14 125 205 -6.019 -0.045 -6.019 -1.467 -1.731 -2.215 1.642 D 64 62 3 65 3 0 9 122 202 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 15 132 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 26 - A - - - ML 66 65 3 68 3 1 13 124 204 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 67 65 3 68 3 0 8 121 200 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 15 131 212 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 27 - G - - - ML 69 68 3 71 3 1 12 123 202 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 70 68 3 71 3 0 7 120 199 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 14 130 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 28 - G - - - ML 72 71 3 74 3 1 12 121 201 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 73 71 3 74 3 0 7 118 197 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 13 128 209 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 29 - A - - - ML 75 74 3 77 3 1 11 120 199 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 76 74 3 77 3 0 6 117 196 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 13 127 207 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 30 - A - - - ML 78 77 3 80 3 1 10 119 198 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 79 77 3 80 3 0 5 116 195 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 12 126 206 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 31 - G - - - ML 81 80 3 83 3 1 10 117 196 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 82 80 3 83 3 0 5 114 193 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 11 124 205 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 32 - U - - - ML 84 83 3 86 3 1 9 116 195 -6.019 -0.045 -6.019 -2.582 -2.096 -2.773 1.788 D 85 83 3 86 3 0 4 113 192 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 10 123 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 33 - G - - - ML 87 86 3 89 3 1 8 115 194 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 88 86 3 89 3 0 3 112 190 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 10 122 202 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 34 - C - - - ML 90 89 3 92 3 1 8 113 192 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 91 89 3 92 3 0 3 110 189 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 9 121 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 35 - C - - - ML 93 92 3 95 3 1 7 112 191 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 94 92 3 95 3 0 2 109 187 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 8 119 199 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 36 - G - - - ML 96 95 3 98 3 1 6 111 189 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 97 95 3 98 3 0 2 108 186 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 8 118 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 37 - U - - - ML 99 98 3 101 3 1 6 109 188 -6.019 -0.045 -6.019 -2.582 -2.096 -2.773 1.788 D 100 98 3 101 3 0 1 106 184 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 7 117 196 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 38 - C - - - ML 102 101 3 104 3 1 5 108 186 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 103 101 3 104 3 0 1 105 183 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 6 115 194 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 39 - A - - - ML 105 104 3 107 3 1 4 107 184 -6.019 -0.045 -6.019 1.263 -0.753 -1.391 -0.675 D 106 104 3 107 3 0 0 104 181 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 6 114 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - G - - - ML 108 107 3 110 3 1 3 105 183 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 109 107 3 110 3 0 0 102 180 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 5 113 191 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - A - - - ML 111 110 3 113 3 1 3 104 181 -6.019 -0.116 -4.023 1.874 -3.346 -3.027 -3.140 D 112 110 3 113 3 0 0 101 178 -11.551 -1.585 -0.585 IL 113 113 3 113 3 1 5 111 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 38 ] 42 - u - - - ML 114 113 3 116 3 1 3 103 180 -5.950 -0.047 -5.950 0.371 -0.757 -0.443 0.464 D 115 113 3 116 3 0 0 100 177 -12.548 -0.587 -1.582 IL 116 116 3 116 3 1 4 110 188 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 43 - G - - - ML 117 116 3 119 3 1 2 101 178 -6.019 -0.045 -6.019 -0.897 -1.874 1.417 -0.946 D 118 116 3 119 3 0 0 98 175 -11.551 -1.585 -0.585 IL 119 119 3 119 3 1 4 109 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 44 - C - - - ML 120 119 3 122 3 1 2 100 177 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 121 119 3 122 3 0 0 97 173 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 3 107 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 45 - G - - - ML 123 122 3 125 3 1 2 98 175 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 124 122 3 125 3 0 0 95 172 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 3 106 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 46 - A - - - ML 126 125 3 128 3 1 1 97 174 -6.019 -0.045 -6.019 1.758 -2.743 -1.794 -2.476 D 127 125 3 128 3 0 0 94 170 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 2 105 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - u - - - ML 129 128 3 131 3 1 1 96 172 -6.019 -0.045 -6.019 -0.924 -0.368 -0.194 0.867 D 130 128 3 131 3 0 0 92 168 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 2 103 181 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - A - - - ML 132 131 3 134 3 1 1 94 170 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 133 131 3 134 3 0 0 91 167 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 2 102 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - A - - - ML 135 134 3 137 3 1 1 93 169 -6.019 -0.045 -6.019 1.750 -2.713 -1.738 -2.443 D 136 134 3 137 3 0 0 89 165 -11.551 -1.585 -0.585 IL 137 137 3 137 3 1 2 101 178 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - C - - - ML 138 137 3 140 3 1 1 91 167 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 139 137 3 140 3 0 0 88 163 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 1 99 176 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - U - - - ML 141 140 3 143 3 1 1 90 165 -6.019 -0.045 -6.019 -2.582 -2.096 -2.773 1.788 D 142 140 3 143 3 0 0 86 162 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 1 98 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - G - - - ML 144 143 3 146 3 1 1 88 164 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 145 143 3 146 3 0 0 85 160 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 1 96 173 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - A - - - ML 147 146 3 149 3 1 1 87 162 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 148 146 3 149 3 0 0 84 158 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 1 95 171 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - C - - - ML 150 149 3 152 3 1 1 85 160 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 151 149 3 152 3 0 0 82 157 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 1 94 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - G - - - ML 153 152 3 155 3 1 1 84 159 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 154 152 3 155 3 0 0 81 155 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - A - - - ML 156 155 3 158 3 1 1 82 157 -6.019 -0.045 -6.019 1.874 -3.346 -3.027 -3.140 D 157 155 3 158 3 0 0 79 153 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 91 166 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - u - - - ML 159 158 3 161 3 1 1 81 155 -6.019 -0.045 -6.019 -0.797 -0.294 -0.654 0.981 D 160 158 3 161 3 0 0 78 152 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 89 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - a - - - ML 162 161 3 164 3 1 1 79 153 -4.405 -0.164 -4.051 0.662 -0.721 0.145 -0.505 D 163 161 3 164 3 0 0 76 150 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 80 154 -3.537 -0.131 -11.181 0.000 0.000 0.000 0.000 [ MATL 55 ] 60 - a - - - ML 165 164 3 167 3 1 1 78 153 -5.952 -0.078 -4.772 0.412 -0.322 -0.742 0.346 D 166 164 3 167 3 0 0 74 148 -12.530 -2.564 -0.268 IL 167 167 3 167 3 1 1 87 162 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 61 - c - - - ML 168 167 3 170 3 1 1 77 151 -5.922 -0.048 -5.922 -0.656 0.663 -0.561 0.143 D 169 167 3 170 3 0 0 74 147 -12.810 -1.663 -0.548 IL 170 170 3 170 3 1 1 85 160 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 62 - u - - - ML 171 170 3 173 3 1 1 75 149 -5.952 -0.047 -5.952 -0.430 -0.013 -0.602 0.685 D 172 170 3 173 3 0 0 73 146 -12.530 -0.596 -1.564 IL 173 173 3 173 3 1 1 84 158 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 63 - a - - - ML 174 173 3 176 3 1 1 74 147 -6.019 -0.045 -6.019 0.454 -0.495 -0.159 0.036 D 175 173 3 176 3 0 0 70 143 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 64 - u - - - ML 177 176 3 179 3 1 1 72 145 -6.019 -0.045 -6.019 -0.137 -0.092 -0.768 0.646 D 178 176 3 179 3 0 0 68 141 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 65 - u - - - ML 180 179 3 182 3 1 1 70 143 -6.019 -0.045 -6.019 -0.139 -0.620 -0.273 0.690 D 181 179 3 182 3 0 0 66 139 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 66 - c - - - ML 183 182 3 185 3 1 1 69 141 -2.113 -0.408 -6.019 -0.150 0.361 -0.300 0.003 D 184 182 3 185 3 0 0 64 136 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 70 142 -0.661 -1.445 -15.222 0.000 0.000 0.000 0.000 [ MATL 62 ] 71 - u - - - ML 186 185 3 188 3 1 1 66 139 -6.019 -0.045 -6.019 -0.475 0.398 -0.654 0.408 D 187 185 3 188 3 0 0 62 134 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 72 - U - - - ML 189 188 3 191 3 1 1 65 137 -6.019 -0.045 -6.019 -0.459 -0.504 -0.856 1.011 D 190 188 3 191 3 0 0 61 132 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 73 - G - - - ML 192 191 3 194 3 1 1 63 135 -6.019 -0.045 -6.019 -0.247 -1.059 1.014 -0.605 D 193 191 3 194 3 0 0 59 130 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 73 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 74 - u - - - ML 195 194 3 197 3 1 1 61 132 -6.019 -0.045 -6.019 -0.482 -0.838 0.281 0.595 D 196 194 3 197 3 0 0 56 127 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 71 143 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 75 - C - - - ML 198 197 3 200 3 1 1 59 130 -6.019 -0.045 -6.019 -2.833 1.809 -3.076 -2.080 D 199 197 3 200 3 0 0 54 125 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 69 141 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 76 - U - - - ML 201 200 3 203 3 1 1 57 127 -6.019 -0.045 -6.019 -2.050 -1.003 -2.266 1.610 D 202 200 3 203 3 0 0 51 121 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 68 139 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 77 - G - - - ML 204 203 3 206 3 1 1 54 124 -6.019 -0.045 -6.019 -2.414 -3.433 1.851 -3.160 D 205 203 3 206 3 0 0 48 118 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 78 - A - - - ML 207 206 3 209 3 1 1 51 121 -6.019 -0.045 -6.019 1.612 -1.962 -2.070 -1.157 D 208 206 3 209 3 0 0 44 113 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 64 134 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 79 - c - - - ML 210 209 3 212 3 1 1 47 117 -6.019 -0.045 -6.019 -0.734 0.823 -0.409 -0.189 D 211 209 3 212 3 0 0 32 101 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 80 - u - - - ML 213 212 3 215 2 1 1 1 1 * 0.000 -0.487 0.223 -0.513 0.504 D 214 212 3 215 2 0 0 0 0 * 0.000 IL 215 215 3 215 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 72 ] - - - - - - E 216 215 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD49 ACC RF00277 DESC Small nucleolar RNA SNORD49 LENG 71 MAXL 151 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Thu Feb 20 18:29:48 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 28 EFFN 4.282715 STATS LOCAL MSV -7.9892 0.71871 STATS LOCAL VITERBI -9.0827 0.71871 STATS LOCAL FORWARD -4.0751 0.71871 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24344 1.56789 1.31824 1.44596 1.38629 1.38629 1.38629 1.38629 0.01802 5.32778 4.34261 0.39730 1.11515 0.00000 * 1 2.17272 1.96068 1.75019 0.55927 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 2 2.35936 2.68201 0.41764 1.72320 - G - - : 1.38629 1.38629 1.38629 1.38629 0.08758 4.17172 2.68195 1.46634 0.26236 1.09861 0.40547 3 1.91656 0.80390 1.82838 1.40799 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03312 4.11726 4.11726 1.46634 0.26236 1.86192 0.16886 4 1.46083 1.52653 1.69726 1.00108 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03312 4.11726 4.11726 1.46634 0.26236 0.37215 1.16878 5 1.26732 0.90404 1.82110 1.88628 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 6 3.17610 2.83947 3.30838 0.14709 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 7 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 8 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 9 3.17610 2.83947 3.30838 0.14709 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 10 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 11 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 12 1.07800 1.74060 1.73608 1.17734 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 13 0.20635 3.15499 2.38769 2.95711 - A - - : 1.38629 1.38629 1.38629 1.38629 0.06666 4.17172 3.01462 1.46634 0.26236 1.09861 0.40547 14 1.63974 1.03025 2.17302 1.09297 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03245 4.13751 4.13751 1.46634 0.26236 1.64494 0.21446 15 1.76970 0.87116 1.83707 1.37885 - c - - : 1.38629 1.38629 1.38629 1.38629 0.06837 4.13751 2.99319 1.46634 0.26236 0.48784 0.95180 16 0.97560 1.73602 1.40494 1.60231 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03242 4.13815 4.13815 1.46634 0.26236 0.49279 0.94396 17 1.87267 1.13147 1.25126 1.43723 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 18 1.47853 1.94228 1.61933 0.84253 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 19 0.80688 1.86255 1.47857 1.76896 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 20 0.24881 3.03774 2.17814 2.82897 - A - - : 1.38629 1.38629 1.38629 1.38629 0.33127 1.32215 4.17172 0.79804 0.59822 1.09861 0.40547 21 2.40281 2.58640 2.92196 0.24793 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 22 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 23 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 24 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 25 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 26 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 27 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 28 3.17610 2.83947 3.30838 0.14709 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 29 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 30 3.34998 0.13221 3.51872 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 31 3.34998 0.13221 3.51872 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 32 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 33 3.17610 2.83947 3.30838 0.14709 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 34 3.34998 0.13221 3.51872 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 35 0.51118 1.90839 2.35051 1.85425 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 36 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 37 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.08008 4.17172 2.78827 1.46634 0.26236 1.09861 0.40547 38 1.12915 1.91103 1.69332 1.06463 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03288 4.12453 4.12453 1.46634 0.26236 0.40641 1.09672 39 2.00775 2.68520 0.40387 2.04196 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 40 3.34998 0.13221 3.51873 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 41 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 42 0.16769 3.28746 2.62957 3.10271 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 43 2.02644 1.64141 1.52057 0.78547 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 44 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 45 0.17320 3.26672 2.59110 3.07987 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 46 3.34998 0.13221 3.51872 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 47 3.17610 2.83947 3.30838 0.14709 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 48 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 49 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 50 3.34998 0.13221 3.51872 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 51 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 52 0.08732 3.70556 3.48469 3.56245 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 53 1.93888 1.59001 1.83994 0.70647 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 54 0.92714 1.88583 1.28574 1.73633 - a - - : 1.38629 1.38629 1.38629 1.38629 0.11379 3.05316 2.80763 0.09013 2.45120 1.09861 0.40547 55 1.10037 1.60940 1.90081 1.14634 - a - - : 1.38629 1.38629 1.38629 1.38629 0.05420 4.12576 3.30752 1.46634 0.26236 1.77702 0.18530 56 1.84120 0.92686 1.77489 1.28708 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03353 4.10509 4.10509 1.46634 0.26236 1.15288 0.37940 57 1.68406 1.39531 1.80359 0.91151 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03284 4.12576 4.12576 1.46634 0.26236 0.41292 1.08387 58 1.07166 1.72936 1.49679 1.36135 - a - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 59 1.48121 1.44972 1.91878 0.93849 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 60 1.48295 1.81594 1.57534 0.90780 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 61 1.49018 1.13614 1.59449 1.38390 - c - - : 1.38629 1.38629 1.38629 1.38629 0.28308 1.46485 4.17172 1.00136 0.45788 1.09861 0.40547 62 1.71552 1.11023 1.83990 1.10318 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 63 1.70464 1.73537 1.97937 0.68583 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 64 1.55754 2.12055 0.68319 1.80559 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 65 1.72039 1.96743 1.19185 0.97411 - u - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 66 3.34998 0.13221 3.51872 2.82823 - C - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 67 2.80736 2.08165 2.95701 0.27058 - U - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 68 3.05946 3.76616 0.10316 3.57691 - G - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 69 0.26895 2.74600 2.82122 2.18837 - A - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 70 1.89495 0.81611 1.67008 1.51735 - c - - : 1.38629 1.38629 1.38629 1.38629 0.03134 4.17172 4.17172 1.46634 0.26236 1.09861 0.40547 71 1.72363 1.23148 1.74154 1.03712 - u - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //