INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD50 ACC RF00278 DESC Small nucleolar RNA SNORD50 STATES 220 NODES 71 CLEN 72 W 90 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:29:50 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 26 EFFN 2.599365 CKSUM 829670160 NULL 0.000 0.000 0.000 0.000 GA 42.00 TC 42.30 NC 41.60 EFP7GF -8.1331 0.71875 ECMLC 0.65758 -5.83548 2.89893 1600000 374615 0.003203 ECMGC 0.43822 -16.01876 -3.42472 1600000 99750 0.004010 ECMLI 0.63428 -4.05653 4.59001 1600000 289073 0.004151 ECMGI 0.44066 -11.19877 0.47686 1600000 68628 0.005829 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 90 111 -7.199 -7.406 -0.070 -4.856 IL 1 1 2 1 4 1 29 94 115 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 28 93 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 5 1 29 90 111 -7.280 -0.074 -7.095 -4.915 -8.199 0.396 -0.712 -0.491 0.446 D 4 2 3 5 5 0 22 89 109 -5.093 -0.937 -4.354 -2.729 -2.008 IL 5 5 3 5 5 1 27 91 111 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 78 A U - - MP 6 5 3 10 6 2 29 89 110 -9.179 -9.118 -0.020 -7.894 -8.174 -8.569 -3.338 -1.116 -3.423 3.009 -3.919 -4.581 0.131 -3.673 -3.398 1.493 -3.935 0.605 -0.094 -3.748 -1.682 -2.365 ML 7 5 3 10 6 1 24 88 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 23 88 108 -7.209 -5.938 -1.250 -5.916 -1.050 -4.130 0.776 -0.669 -0.387 -0.162 D 9 5 3 10 6 0 20 86 106 -9.225 -7.923 -2.392 -4.402 -4.419 -0.495 IL 10 10 5 10 6 1 26 89 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 26 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 77 U A - - MP 12 11 6 16 6 2 27 87 108 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -3.538 -3.572 -3.618 -0.076 -2.197 -4.387 1.146 -3.577 -3.628 0.062 -4.140 -1.745 3.273 -3.792 -0.475 -1.741 ML 13 11 6 16 6 1 23 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 22 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 19 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 25 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 25 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 76 C G - - MP 18 17 6 22 4 2 25 85 106 -7.199 -7.406 -0.045 -5.820 -4.441 -4.429 -4.147 -0.623 -2.840 -4.563 3.440 -3.645 -4.183 -0.429 -4.472 -2.427 0.721 -4.497 0.310 -3.015 ML 19 17 6 22 4 1 22 85 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 20 85 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 19 84 105 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 24 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 23 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - u - - - ML 24 23 6 26 3 1 24 83 103 -8.199 -0.017 -6.853 0.262 -0.617 -1.164 0.767 D 25 23 6 26 3 0 18 82 102 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 23 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 27 26 3 29 3 1 23 82 102 -8.199 -0.017 -6.853 1.030 -1.339 -0.126 -0.630 D 28 26 3 29 3 0 17 80 101 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 22 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 30 29 3 32 3 1 22 81 101 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 31 29 3 32 3 0 16 79 100 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 21 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 33 32 3 35 3 1 21 80 100 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 34 32 3 35 3 0 16 78 99 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 20 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 36 35 3 38 3 1 21 79 99 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 37 35 3 38 3 0 15 77 98 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 20 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 39 38 3 41 3 1 20 78 98 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 40 38 3 41 3 0 14 76 97 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 19 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 42 41 3 44 3 1 19 77 97 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 43 41 3 44 3 0 13 75 96 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 45 44 3 47 3 1 18 76 96 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 46 44 3 47 3 0 13 74 94 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - u - - - ML 48 47 3 50 3 1 18 75 95 -2.642 -0.267 -6.853 0.122 -0.886 -0.754 0.830 D 49 47 3 50 3 0 12 73 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 17 75 95 -1.956 -0.509 -4.656 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - C - - - ML 51 50 3 53 3 1 17 73 93 -8.199 -0.017 -6.853 -0.542 1.141 -1.732 -0.309 D 52 50 3 53 3 0 11 72 92 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 16 75 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - c - - - ML 54 53 3 56 3 1 16 72 92 -8.199 -0.017 -6.853 -0.659 0.951 -1.638 0.153 D 55 53 3 56 3 0 10 71 91 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 57 56 3 59 3 1 16 71 91 -8.199 -0.017 -6.853 -0.911 -1.299 -1.905 1.483 D 58 56 3 59 3 0 10 70 90 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 60 59 3 62 3 1 15 70 90 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 61 59 3 62 3 0 9 69 89 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - U - - - ML 63 62 3 65 3 1 14 69 89 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 64 62 3 65 3 0 8 68 88 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - C - - - ML 66 65 3 68 3 1 13 68 88 -8.199 -0.017 -6.853 -2.318 1.749 -3.149 -1.617 D 67 65 3 68 3 0 7 67 87 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - C - - - ML 69 68 3 71 3 1 13 67 87 -8.199 -0.017 -6.853 -2.318 1.749 -3.149 -1.617 D 70 68 3 71 3 0 7 66 86 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - C - - - ML 72 71 3 74 3 1 12 66 86 -8.199 -0.017 -6.853 -1.133 1.499 -2.285 -0.965 D 73 71 3 74 3 0 6 65 85 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - G - - - ML 75 74 3 77 3 1 11 65 85 -8.199 -0.017 -6.853 -0.723 -2.391 1.546 -1.817 D 76 74 3 77 3 0 5 64 84 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - A - - - ML 78 77 3 80 3 1 11 64 84 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 79 77 3 80 3 0 5 63 83 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 81 80 3 83 3 1 10 63 83 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 82 80 3 83 3 0 4 61 82 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 9 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - c - - - ML 84 83 3 86 3 1 9 62 82 -8.199 -0.017 -6.853 -0.418 0.864 -0.725 -0.275 D 85 83 3 86 3 0 3 60 80 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - C - - - ML 87 86 3 89 3 1 9 61 81 -8.199 -0.017 -6.853 -2.318 1.749 -3.149 -1.617 D 88 86 3 89 3 0 3 59 79 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 90 89 3 92 3 1 8 60 80 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 91 89 3 92 3 0 2 58 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - G - - - ML 93 92 3 95 3 1 7 59 79 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 94 92 3 95 3 0 1 57 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - A - - - ML 96 95 3 98 3 1 7 58 78 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 97 95 3 98 3 0 1 56 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - a - - - ML 99 98 3 101 3 1 6 57 76 -8.199 -0.017 -6.853 0.964 -0.847 -1.166 0.067 D 100 98 3 101 3 0 0 55 75 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - U - - - ML 102 101 3 104 3 1 5 56 75 -8.199 -0.017 -6.853 -0.499 -0.275 -1.460 1.072 D 103 101 3 104 3 0 0 54 74 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - u - - - ML 105 104 3 107 3 1 5 55 74 -3.150 -0.187 -6.853 0.131 -0.985 -1.318 0.999 D 106 104 3 107 3 0 0 53 72 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 55 75 -1.626 -0.791 -3.354 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - u - - - ML 108 107 3 110 3 1 4 53 73 -8.157 -0.018 -6.811 -0.539 0.551 -1.455 0.567 D 109 107 3 110 3 0 0 52 71 -6.564 -1.077 -0.956 IL 110 110 3 110 3 1 3 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 37 - C - - - ML 111 110 3 113 3 1 3 52 72 -8.199 -0.017 -6.853 -0.908 1.197 -1.871 -0.151 D 112 110 3 113 3 0 0 51 70 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - U - - - ML 114 113 3 116 3 1 2 51 71 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 115 113 3 116 3 0 0 50 69 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - G - - - ML 117 116 3 119 3 1 1 50 69 -8.199 -0.099 -3.997 -2.074 -3.364 1.814 -2.751 D 118 116 3 119 3 0 0 48 68 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - u - - - ML 120 119 3 122 3 1 3 49 68 -8.119 -0.018 -6.773 0.129 -0.709 -1.197 0.894 D 121 119 3 122 3 0 0 47 67 -6.841 -2.354 -0.330 IL 122 122 3 122 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - U - - - ML 123 122 3 125 3 1 2 48 67 -8.119 -0.018 -6.773 -0.532 -1.108 -1.620 1.333 D 124 122 3 125 3 0 0 46 66 -6.841 -2.354 -0.330 IL 125 125 3 125 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - G - - - ML 126 125 3 128 3 1 2 47 66 -2.661 -0.264 -6.773 -1.908 -3.176 1.788 -2.564 D 127 125 3 128 3 0 0 45 64 -6.841 -0.822 -1.232 IL 128 128 3 128 3 1 1 47 67 -1.754 -0.589 -4.694 0.000 0.000 0.000 0.000 [ MATL 40 ] 45 - A - - - ML 129 128 3 131 3 1 1 45 65 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 130 128 3 131 3 0 0 44 63 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 46 - A - - - ML 132 131 3 134 3 1 1 44 63 -8.199 -0.017 -6.853 1.553 -2.025 -1.050 -1.565 D 133 131 3 134 3 0 0 43 62 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 47 - A - - - ML 135 134 3 137 3 1 1 43 62 -8.199 -0.017 -6.853 1.556 -2.031 -1.062 -1.572 D 136 134 3 137 3 0 0 42 61 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 48 - A - - - ML 138 137 3 140 3 1 1 42 61 -8.199 -0.049 -5.062 1.696 -2.379 -1.685 -1.958 D 139 137 3 140 3 0 0 41 60 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 49 - A - - - ML 141 140 3 143 3 1 1 41 60 -8.168 -0.056 -4.843 1.372 -1.193 -1.435 -0.727 D 142 140 3 143 3 0 0 39 59 -6.475 -1.988 -0.441 IL 143 143 3 143 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 50 - A - - - ML 144 143 3 146 3 1 1 40 59 -8.130 -0.018 -6.784 1.034 -0.376 -0.999 -0.552 D 145 143 3 146 3 0 0 38 58 -6.767 -2.280 -0.349 IL 146 146 3 146 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 51 - a - - - ML 147 146 3 149 3 1 1 39 58 -8.130 -0.018 -6.784 0.493 -0.114 -0.909 0.184 D 148 146 3 149 3 0 0 38 57 -6.767 -0.881 -1.159 IL 149 149 3 149 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 52 - a - - - ML 150 149 3 152 3 1 1 38 57 -8.199 -0.186 -3.085 0.453 -0.455 -0.216 0.058 D 151 149 3 152 3 0 0 36 56 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 53 - u - - - ML 153 152 3 155 3 1 1 37 56 -8.032 -0.049 -5.091 0.011 0.249 -0.880 0.334 D 154 152 3 155 3 0 0 35 54 -7.304 -2.817 -0.232 IL 155 155 3 155 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 54 - a - - - ML 156 155 3 158 3 1 1 36 55 -8.004 -0.020 -6.658 0.608 -0.476 -1.001 0.329 D 157 155 3 158 3 0 0 34 53 -7.424 -1.401 -0.700 IL 158 158 3 158 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 55 - u - - - ML 159 158 3 161 3 1 1 35 54 -8.091 -0.019 -6.745 0.240 -0.357 -0.879 0.580 D 160 158 3 161 3 0 0 33 52 -7.013 -1.836 -0.490 IL 161 161 3 161 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 56 - a - - - ML 162 161 3 164 3 1 1 33 53 -8.117 -0.019 -6.772 0.585 -0.722 -0.511 0.253 D 163 161 3 164 3 0 0 32 51 -6.850 -1.692 -0.553 IL 164 164 3 164 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 57 - U - - - ML 165 164 3 167 3 1 1 32 51 -8.143 -0.018 -6.797 -1.052 -1.322 -1.958 1.516 D 166 164 3 167 3 0 0 31 50 -6.674 -0.965 -1.065 IL 167 167 3 167 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 58 - A - - - ML 168 167 3 170 3 1 1 31 50 -5.170 -0.054 -6.853 1.668 -2.292 -1.540 -1.864 D 169 167 3 170 3 0 0 30 49 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 52 -1.535 -0.733 -4.235 0.000 0.000 0.000 0.000 [ MATL 54 ] 60 - C - - - ML 171 170 3 173 3 1 1 30 49 -8.199 -0.017 -6.853 -1.582 1.490 -2.430 -0.576 D 172 170 3 173 3 0 0 29 48 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 61 - G - - - ML 174 173 3 176 3 1 1 29 48 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 175 173 3 176 3 0 0 28 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 62 - G - - - ML 177 176 3 179 3 1 1 28 47 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 178 176 3 179 3 0 0 27 46 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 63 - A - - - ML 180 179 3 182 3 1 1 27 46 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 181 179 3 182 3 0 0 26 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 64 - U - - - ML 183 182 3 185 3 1 1 26 44 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 184 182 3 185 3 0 0 25 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 65 - C - - - ML 186 185 3 188 3 1 1 24 43 -8.199 -0.017 -6.853 -1.210 1.226 -2.055 -0.017 D 187 185 3 188 3 0 0 23 42 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 66 - U - - - ML 189 188 3 191 3 1 1 23 42 -8.199 -0.017 -6.853 -0.976 0.000 -1.746 1.133 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 67 - G - - - ML 192 191 3 194 3 1 1 22 41 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 68 - G - - - ML 195 194 3 197 3 1 1 21 40 -8.199 -0.017 -6.853 -1.117 -2.676 1.655 -2.097 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 69 - C - - - ML 198 197 3 200 3 1 1 20 38 -8.199 -0.017 -6.853 -2.318 1.749 -3.149 -1.617 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 70 - U - - - ML 201 200 3 203 3 1 1 19 37 -8.199 -0.017 -6.853 -0.727 -1.231 -1.793 1.423 D 202 200 3 203 3 0 0 18 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 71 - U - - - ML 204 203 3 206 3 1 1 17 36 -8.199 -0.017 -6.853 -1.078 -1.238 -1.419 1.448 D 205 203 3 206 3 0 0 17 36 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 72 - C - - - ML 207 206 3 209 3 1 1 16 35 -8.199 -0.017 -6.853 -2.318 1.749 -3.149 -1.617 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 73 - U - - - ML 210 209 3 212 3 1 1 15 33 -8.199 -0.017 -6.853 -1.930 -1.850 -2.683 1.724 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 74 - G - - - ML 213 212 3 215 3 1 1 13 31 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 75 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.804 -2.848 -2.433 -2.439 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD50 ACC RF00278 DESC Small nucleolar RNA SNORD50 LENG 72 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:29:51 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 26 EFFN 2.770752 CKSUM 829670160 STATS LOCAL MSV -8.6883 0.71875 STATS LOCAL VITERBI -9.2503 0.71875 STATS LOCAL FORWARD -3.4774 0.71875 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.21296 1.56857 1.52934 1.28135 1.38629 1.38629 1.38629 1.38629 0.05234 4.07496 3.38148 1.46634 0.26236 0.00000 * 1 1.10891 1.88971 1.72814 1.07484 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.06944 4.05781 2.99984 1.46634 0.26236 1.38646 0.28763 2 0.58321 2.57316 1.29302 2.39515 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.03639 4.02476 4.02476 1.46634 0.26236 0.41562 1.07861 3 2.61617 1.88175 2.43056 0.37599 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 4 2.99385 0.35694 2.77653 1.67217 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 5 1.20265 1.82389 2.21052 0.84732 5 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 6 0.66228 2.34019 1.47097 1.84317 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 7 2.79643 2.72905 3.32069 0.17726 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 8 2.90015 3.80384 0.11813 3.37795 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 9 0.12532 3.43638 3.14154 3.16078 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 10 2.79643 2.72905 3.32069 0.17726 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 11 2.90015 3.80384 0.11813 3.37795 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 12 0.12532 3.43638 3.14154 3.16078 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 13 1.30303 2.01868 1.91555 0.80252 13 u - - _ 1.38629 1.38629 1.38629 1.38629 0.22634 1.68438 4.07496 0.17405 1.83416 1.09861 0.40547 14 1.78336 0.57679 2.62792 1.61949 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 15 1.86738 0.70968 2.55717 1.28683 16 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 16 2.05019 2.32602 2.75417 0.34257 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 17 0.12532 3.43638 3.14154 3.16078 18 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 18 2.79643 2.72905 3.32069 0.17726 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 19 3.08499 0.15909 3.65980 2.58215 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 20 3.08499 0.15909 3.65980 2.58215 21 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 21 2.21643 0.32704 3.03531 2.10467 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 22 1.91396 3.09814 0.30051 2.70412 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 23 0.12532 3.43638 3.14154 3.16078 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 24 0.12532 3.43638 3.14154 3.16078 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 25 1.69565 0.76952 1.89597 1.59400 26 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 26 3.08499 0.15909 3.65980 2.58215 27 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 27 2.79643 2.72905 3.32069 0.17726 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 28 2.90015 3.80384 0.11813 3.37795 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 29 0.12532 3.43638 3.14154 3.16078 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 30 0.70720 1.98675 2.21599 1.34404 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 31 1.74995 1.57898 2.42579 0.63182 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 32 1.29766 2.09334 2.32509 0.68165 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.16417 2.00685 4.07496 0.23611 1.55918 1.09861 0.40547 33 1.77993 0.99006 2.42332 0.99109 36 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 34 2.04898 0.53823 2.72663 1.50546 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 35 2.79643 2.72905 3.32069 0.17726 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 36 2.90015 3.80384 0.11813 3.37795 39 G - - _ 1.38629 1.38629 1.38629 1.38629 0.09653 4.07496 2.58997 1.46634 0.26236 1.09861 0.40547 37 1.29828 1.89147 2.23523 0.75676 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03675 4.01518 4.01518 1.46634 0.26236 1.85863 0.16947 38 1.77607 2.18644 2.54746 0.44613 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03675 4.01518 4.01518 1.46634 0.26236 1.85863 0.16947 39 2.78405 3.67315 0.13470 3.24836 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.22682 1.68796 4.01518 0.30719 1.32996 0.37364 1.16548 40 0.12532 3.43638 3.14154 3.16078 45 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 41 0.29774 2.83701 2.13035 2.52440 46 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 42 0.29548 2.84134 2.13904 2.52940 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 43 0.19917 3.09250 2.59108 2.80899 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.05854 4.07496 3.22211 1.46634 0.26236 1.09861 0.40547 44 0.42208 2.23124 2.41441 1.91390 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06484 4.05182 3.09249 1.46634 0.26236 1.46933 0.26147 45 0.65733 1.64652 2.09841 1.79337 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03644 4.02342 4.02342 1.46634 0.26236 1.78444 0.18379 46 1.03991 1.46117 2.02813 1.26242 51 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03644 4.02342 4.02342 1.46634 0.26236 0.40914 1.09130 47 1.06979 1.70320 1.53449 1.34995 52 a - - _ 1.38629 1.38629 1.38629 1.38629 0.16409 4.07496 2.00738 1.46634 0.26236 1.09861 0.40547 48 1.38298 1.20362 2.00590 1.15670 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.06167 3.95014 3.20506 1.46634 0.26236 2.29311 0.10642 49 0.95779 1.72001 2.09462 1.15812 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04014 3.92860 3.92860 1.46634 0.26236 0.91064 0.51461 50 1.21875 1.63614 2.00417 0.98111 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03755 3.99389 3.99389 1.46634 0.26236 1.28076 0.32549 51 0.97546 1.89600 1.74360 1.21092 56 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03679 4.01408 4.01408 1.46634 0.26236 1.14040 0.38521 52 2.15368 2.34212 2.79221 0.31947 57 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03608 4.03322 4.03322 1.46634 0.26236 0.46202 0.99428 53 0.21842 3.02937 2.48513 2.74033 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.06207 3.14209 4.07496 0.65948 0.72798 1.09861 0.40547 54 2.54363 0.33547 3.13507 1.81449 60 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 55 2.90015 3.80384 0.11813 3.37795 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 56 2.90015 3.80384 0.11813 3.37795 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 57 0.12532 3.43638 3.14154 3.16078 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 58 2.79643 2.72905 3.32069 0.17726 64 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 59 2.27072 0.51865 2.86177 1.40947 65 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 60 2.09970 1.38329 2.63551 0.58866 66 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 61 2.90015 3.80384 0.11813 3.37795 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 62 2.19926 3.30325 0.22613 2.90517 68 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 63 3.08499 0.15909 3.65980 2.58215 69 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 64 1.91673 2.27640 2.67333 0.38384 70 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 65 2.17819 2.28238 2.39844 0.36550 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 66 3.08499 0.15909 3.65980 2.58215 72 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 67 2.79643 2.72905 3.32069 0.17726 73 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 68 2.90015 3.80384 0.11813 3.37795 74 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 69 0.12532 3.43638 3.14154 3.16078 75 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 70 2.14234 2.91836 0.26984 2.73187 76 G - - > 1.38629 1.38629 1.38629 1.38629 0.03458 4.07496 4.07496 1.46634 0.26236 1.09861 0.40547 71 0.44486 2.58034 1.69816 2.29939 77 A - - > 1.38629 1.38629 1.38629 1.38629 0.05234 4.07496 3.38148 1.46634 0.26236 1.09861 0.40547 72 2.46905 1.59183 2.34620 0.48443 78 U - - > 1.38629 1.38629 1.38629 1.38629 0.01775 4.04037 * 1.46634 0.26236 0.00000 * //