INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD44 ACC RF00287 DESC Small nucleolar RNA SNORD44 STATES 187 NODES 61 CLEN 61 W 78 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:30:15 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 12 EFFN 2.850586 CKSUM 3859760013 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 40.70 NC 38.60 EFP7GF -9.7682 0.71891 ECMLC 0.62712 -8.42501 1.53200 1600000 618034 0.001942 ECMGC 0.36299 -18.94758 -3.12134 1600000 125025 0.003199 ECMLI 0.59207 -6.79194 2.91794 1600000 376631 0.003186 ECMGI 0.39308 -13.55410 0.24082 1600000 90583 0.004416 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 78 98 -7.283 -7.490 -0.042 -5.904 IL 1 1 2 1 4 1 23 82 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 23 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - C - - - ML 3 2 3 5 3 1 23 78 98 -8.278 -0.017 -6.932 -2.510 1.780 -3.338 -1.774 D 4 2 3 5 3 0 17 77 97 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 22 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 1 22 77 97 -8.278 -0.017 -6.932 -2.510 1.780 -3.338 -1.774 D 7 5 3 8 3 0 17 76 96 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 21 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 5 1 21 76 96 -7.371 -0.032 -7.186 -7.398 -8.290 -2.082 -1.977 -2.840 1.753 D 10 8 3 11 5 0 16 75 95 -4.959 -0.803 -4.221 -2.596 -2.508 IL 11 11 3 11 5 1 20 77 97 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 65 g u - - MP 12 11 3 16 6 2 21 75 95 -9.245 -9.184 -0.019 -7.961 -8.240 -8.635 -3.795 -2.564 -3.932 1.442 -4.871 -5.176 -0.407 -4.102 -3.702 2.086 -4.198 2.741 -0.645 -4.363 -2.343 -2.690 ML 13 11 3 16 6 1 17 74 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 3 16 6 1 16 74 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 3 16 6 0 13 72 92 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 18 75 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 18 75 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 64 g c - - MP 18 17 6 22 4 2 19 73 93 -7.283 -2.558 -0.309 -5.904 -3.047 -2.498 -3.142 0.912 -2.922 -3.843 1.704 -3.257 -3.157 1.868 -3.594 1.470 1.341 -3.213 -0.618 -2.102 ML 19 17 6 22 4 1 16 73 93 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 4 1 14 72 92 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 21 17 6 22 4 0 13 71 91 -4.568 -4.250 -2.265 -0.520 IL 22 22 5 22 4 1 18 74 94 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 23 23 6 23 3 1 18 72 92 -1.975 -0.501 -4.675 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - A - - - ML 24 23 6 26 3 1 17 71 91 -8.278 -0.017 -6.932 1.235 -1.752 -0.120 -1.222 D 25 23 6 26 3 0 12 69 89 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 16 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 27 26 3 29 3 1 17 70 90 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 28 26 3 29 3 0 11 68 88 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 16 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 30 29 3 32 3 1 16 69 89 -8.278 -0.017 -6.932 -2.233 -3.543 1.836 -2.928 D 31 29 3 32 3 0 11 67 87 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 15 70 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 33 32 3 35 3 1 15 68 88 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 34 32 3 35 3 0 10 66 86 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 14 69 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 36 35 3 38 3 1 14 67 86 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 37 35 3 38 3 0 9 65 85 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 13 68 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 39 38 3 41 3 1 13 66 85 -8.278 -0.017 -6.932 -2.233 -3.543 1.836 -2.928 D 40 38 3 41 3 0 9 64 84 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 13 67 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 42 41 3 44 3 1 12 64 84 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 43 41 3 44 3 0 8 63 83 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 12 66 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - U - - - ML 45 44 3 47 3 1 11 63 83 -8.278 -0.017 -6.932 -1.195 -0.403 -1.953 1.350 D 46 44 3 47 3 0 7 62 82 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 11 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 48 47 3 50 3 1 11 62 82 -8.278 -0.134 -3.547 1.826 -3.007 -2.577 -2.615 D 49 47 3 50 3 0 7 61 81 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 11 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - A - - - ML 51 50 3 53 3 1 11 61 81 -4.001 -0.107 -6.816 1.793 -2.773 -2.365 -2.356 D 52 50 3 53 3 0 6 60 80 -7.092 -0.655 -1.483 IL 53 53 3 53 3 1 10 62 82 -1.652 -0.660 -4.352 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - G - - - ML 54 53 3 56 3 1 10 60 80 -8.278 -0.017 -6.932 -0.875 -2.574 1.603 -2.006 D 55 53 3 56 3 0 4 59 79 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 9 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - C - - - ML 57 56 3 59 3 1 10 59 79 -8.278 -0.017 -6.932 -0.840 1.417 -2.164 -0.870 D 58 56 3 59 3 0 3 58 77 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 8 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 60 59 3 62 3 1 9 58 78 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 61 59 3 62 3 0 3 57 76 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 7 60 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 63 62 3 65 3 1 8 57 77 -8.278 -0.017 -6.932 1.545 -2.063 -0.958 -1.607 D 64 62 3 65 3 0 2 56 75 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 7 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - A - - - ML 66 65 3 68 3 1 8 56 76 -8.278 -0.017 -6.932 1.588 -2.142 -1.121 -1.699 D 67 65 3 68 3 0 2 54 74 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 6 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 69 68 3 71 3 1 7 55 74 -8.278 -0.017 -6.932 -1.095 -1.278 -1.312 1.442 D 70 68 3 71 3 0 1 53 73 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 5 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - a - - - ML 72 71 3 74 3 1 6 54 73 -3.850 -0.116 -6.932 0.789 -1.693 0.587 -1.120 D 73 71 3 74 3 0 0 52 71 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 5 55 74 -1.694 -0.636 -4.394 0.000 0.000 0.000 0.000 [ MATL 23 ] 25 - C - - - ML 75 74 3 77 3 1 6 52 72 -8.278 -0.017 -6.932 -0.543 1.125 -1.190 -0.526 D 76 74 3 77 3 0 0 51 71 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 4 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 26 - U - - - ML 78 77 3 80 3 1 5 51 71 -8.278 -0.017 -6.932 -0.532 -1.090 -1.121 1.250 D 79 77 3 80 3 0 0 50 70 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 4 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 27 - G - - - ML 81 80 3 83 3 1 4 50 70 -8.278 -0.017 -6.932 -2.233 -3.543 1.836 -2.928 D 82 80 3 83 3 0 0 49 69 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 3 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 28 - A - - - ML 84 83 3 86 3 1 3 49 69 -8.278 -0.017 -6.932 1.337 -0.714 -1.496 -0.975 D 85 83 3 86 3 0 0 48 68 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 2 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 29 - C - - - ML 87 86 3 89 3 1 2 48 68 -8.278 -0.017 -6.932 -1.637 1.491 -2.495 -0.534 D 88 86 3 89 3 0 0 47 66 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 2 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 30 - U - - - ML 90 89 3 92 3 1 1 47 67 -8.278 -0.106 -3.881 -2.082 -1.977 -2.840 1.753 D 91 89 3 92 3 0 0 46 65 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 31 - G - - - ML 93 92 3 95 3 1 2 46 66 -8.189 -0.018 -6.843 -0.373 -1.174 1.187 -0.977 D 94 92 3 95 3 0 0 45 64 -6.928 -0.759 -1.319 IL 95 95 3 95 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 32 - A - - - ML 96 95 3 98 3 1 2 45 64 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 97 95 3 98 3 0 0 44 63 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - A - - - ML 99 98 3 101 3 1 2 44 63 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 100 98 3 101 3 0 0 43 62 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - u - - - ML 102 101 3 104 3 1 1 43 62 -4.159 -0.096 -6.932 -0.034 0.177 -0.847 0.418 D 103 101 3 104 3 0 0 41 60 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 44 63 -1.646 -0.663 -4.346 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - g - - - ML 105 104 3 107 3 1 1 42 61 -8.278 -0.017 -6.932 0.607 -1.734 0.789 -1.157 D 106 104 3 107 3 0 0 40 60 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 37 - U - - - ML 108 107 3 110 3 1 1 41 60 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 109 107 3 110 3 0 0 39 59 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - G - - - ML 111 110 3 113 3 1 1 39 59 -8.278 -0.017 -6.932 -2.233 -3.543 1.836 -2.928 D 112 110 3 113 3 0 0 38 58 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - A - - - ML 114 113 3 116 3 1 1 38 58 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 115 113 3 116 3 0 0 37 57 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - A - - - ML 117 116 3 119 3 1 1 37 57 -8.278 -0.098 -3.998 1.826 -3.007 -2.577 -2.615 D 118 116 3 119 3 0 0 36 55 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - G - - - ML 120 119 3 122 3 1 1 36 55 -8.197 -0.018 -6.851 -2.070 -3.360 1.814 -2.747 D 121 119 3 122 3 0 0 35 54 -6.875 -0.796 -1.266 IL 122 122 3 122 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - G - - - ML 123 122 3 125 3 1 1 35 54 -8.278 -0.017 -6.932 -0.444 -1.643 1.222 -0.708 D 124 122 3 125 3 0 0 34 53 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - U - - - ML 126 125 3 128 3 1 1 34 53 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 127 125 3 128 3 0 0 33 52 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - C - - - ML 129 128 3 131 3 1 1 33 52 -8.278 -0.017 -6.932 -1.637 1.491 -2.495 -0.534 D 130 128 3 131 3 0 0 32 51 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 45 - U - - - ML 132 131 3 134 3 1 1 32 51 -8.278 -0.017 -6.932 -0.331 -1.157 -1.618 1.282 D 133 131 3 134 3 0 0 31 50 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 34 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 46 - U - - - ML 135 134 3 137 3 1 1 31 50 -8.278 -0.017 -6.932 -1.429 -0.931 -2.175 1.527 D 136 134 3 137 3 0 0 30 49 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 33 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 47 - A - - - ML 138 137 3 140 3 1 1 30 49 -8.278 -0.095 -4.042 1.826 -3.007 -2.577 -2.615 D 139 137 3 140 3 0 0 29 48 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 32 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 48 - A - - - ML 141 140 3 143 3 1 1 29 48 -8.200 -0.017 -6.854 1.184 -0.814 -1.287 -0.415 D 142 140 3 143 3 0 0 28 47 -6.855 -0.811 -1.247 IL 143 143 3 143 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 49 - U - - - ML 144 143 3 146 3 1 1 28 47 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 145 143 3 146 3 0 0 27 46 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 50 - U - - - ML 147 146 3 149 3 1 1 27 45 -8.278 -0.017 -6.932 -1.405 -0.881 -2.152 1.513 D 148 146 3 149 3 0 0 26 45 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 51 - A - - - ML 150 149 3 152 3 1 1 25 44 -8.278 -0.017 -6.932 1.391 -1.864 -0.483 -1.366 D 151 149 3 152 3 0 0 24 43 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 52 - G - - - ML 153 152 3 155 3 1 1 24 43 -8.278 -0.017 -6.932 -2.233 -3.543 1.836 -2.928 D 154 152 3 155 3 0 0 23 42 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 53 - C - - - ML 156 155 3 158 3 1 1 23 42 -8.278 -0.017 -6.932 -2.510 1.780 -3.338 -1.774 D 157 155 3 158 3 0 0 22 41 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 54 - U - - - ML 159 158 3 161 3 1 1 22 41 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 160 158 3 161 3 0 0 21 40 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 55 - C - - - ML 162 161 3 164 3 1 1 21 40 -8.278 -0.017 -6.932 -1.359 1.309 -2.216 -0.124 D 163 161 3 164 3 0 0 20 39 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 56 - U - - - ML 165 164 3 167 3 1 1 20 38 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 166 164 3 167 3 0 0 19 38 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - A - - - ML 168 167 3 170 3 1 1 19 37 -8.278 -0.017 -6.932 1.826 -3.007 -2.577 -2.615 D 169 167 3 170 3 0 0 18 37 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 58 - a - - - ML 171 170 3 173 3 1 1 17 36 -8.278 -0.017 -6.932 0.739 -0.527 -0.430 -0.160 D 172 170 3 173 3 0 0 17 35 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 59 - C - - - ML 174 173 3 176 3 1 1 16 34 -8.278 -0.017 -6.932 -2.510 1.780 -3.338 -1.774 D 175 173 3 176 3 0 0 16 34 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 60 - U - - - ML 177 176 3 179 3 1 1 15 33 -8.278 -0.017 -6.932 -2.082 -1.977 -2.840 1.753 D 178 176 3 179 3 0 0 15 33 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 61 - G - - - ML 180 179 3 182 3 1 1 13 31 -8.278 -0.090 -4.119 -2.233 -3.543 1.836 -2.928 D 181 179 3 182 3 0 0 13 32 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 62 - A - - - ML 183 182 3 185 2 1 1 1 1 * 0.000 1.806 -2.860 -2.444 -2.452 D 184 182 3 185 2 0 0 0 0 * 0.000 IL 185 185 3 185 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 60 ] - - - - - - E 186 185 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD44 ACC RF00287 DESC Small nucleolar RNA SNORD44 LENG 61 MAXL 140 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:30:15 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 12 EFFN 2.985352 CKSUM 3859760013 STATS LOCAL MSV -7.7460 0.71891 STATS LOCAL VITERBI -8.7475 0.71891 STATS LOCAL FORWARD -3.6737 0.71891 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.15592 1.69579 1.51629 1.26496 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 0.00000 * 1 3.19410 0.14306 3.76615 2.67147 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 2 3.19410 0.14306 3.76615 2.67147 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 3 2.88342 2.80170 3.41041 0.16214 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 4 1.66876 2.93916 0.36380 2.75544 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 5 1.94456 1.50203 0.88199 1.51269 5 g - - < 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 6 0.52135 2.63177 1.46666 2.26689 6 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 7 2.88342 2.80170 3.41041 0.16214 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 8 2.99012 3.90440 0.10685 3.47695 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 9 0.11376 3.52718 3.22397 3.26106 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 10 2.88342 2.80170 3.41041 0.16214 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 11 2.99012 3.90440 0.10685 3.47695 11 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 12 0.11376 3.52718 3.22397 3.26106 12 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 13 2.24641 1.67066 2.77271 0.44067 13 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 14 0.11376 3.52718 3.22397 3.26106 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.12173 4.11461 2.31991 1.46634 0.26236 1.09861 0.40547 15 0.13570 3.36216 3.07433 3.07879 15 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10352 2.51882 4.02911 0.39507 1.11973 0.28695 1.38850 16 2.01396 3.21154 0.26566 2.82102 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 17 1.99192 0.38908 2.93000 2.02124 18 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 18 0.11376 3.52718 3.22397 3.26106 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 19 0.30681 2.85111 2.05953 2.53940 20 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 20 0.27720 2.90727 2.17545 2.60480 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 21 2.17764 2.30015 2.31257 0.37478 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 22 0.83311 2.58964 0.97074 2.19414 23 a - - _ 1.38629 1.38629 1.38629 1.38629 0.10842 2.44859 4.11461 0.34281 1.23708 1.09861 0.40547 23 1.78017 0.59188 2.22603 1.77108 25 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 24 1.76966 2.16285 2.17602 0.50896 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 25 2.99012 3.90440 0.10685 3.47695 27 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 26 0.44897 1.88525 2.45041 2.09018 28 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 27 2.56475 0.34064 3.16153 1.77558 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 28 2.88342 2.80170 3.41041 0.16214 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.10081 4.11461 2.53121 1.46634 0.26236 1.09861 0.40547 29 1.65993 2.21191 0.55055 2.08968 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03549 4.04929 4.04929 1.46634 0.26236 0.34398 1.23424 30 0.11376 3.52718 3.22397 3.26106 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 31 0.11376 3.52718 3.22397 3.26106 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 32 1.41318 1.25749 1.97872 1.09655 34 u - - _ 1.38629 1.38629 1.38629 1.38629 0.09271 2.62821 4.11461 0.40371 1.10214 1.09861 0.40547 33 0.96122 2.61789 0.83006 2.22012 36 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 34 2.88342 2.80170 3.41041 0.16214 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 35 2.99012 3.90440 0.10685 3.47695 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 36 0.11376 3.52718 3.22397 3.26106 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 37 0.11376 3.52718 3.22397 3.26106 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09462 4.11461 2.60432 1.46634 0.26236 1.09861 0.40547 38 2.87657 3.77739 0.12130 3.35179 41 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03528 4.05526 4.05526 1.46634 0.26236 0.36582 1.18296 39 1.70837 2.54896 0.52770 1.89237 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 40 2.88342 2.80170 3.41041 0.16214 43 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 41 2.56475 0.34064 3.16153 1.77558 44 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 42 1.62567 2.21212 2.53452 0.48703 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 43 2.41401 2.04732 2.93156 0.31725 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 44 0.11376 3.52718 3.22397 3.26106 47 A - - _ 1.38629 1.38629 1.38629 1.38629 0.09243 4.11461 2.63167 1.46634 0.26236 1.09861 0.40547 45 0.55656 1.95784 2.29883 1.68588 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03520 4.05738 4.05738 1.46634 0.26236 0.37427 1.16407 46 2.88342 2.80170 3.41041 0.16214 49 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 47 2.39682 2.01192 2.91485 0.32705 50 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 48 0.41345 2.71042 1.72294 2.36886 51 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 49 2.99012 3.90440 0.10685 3.47695 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 50 3.19410 0.14306 3.76615 2.67147 53 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 51 2.88342 2.80170 3.41041 0.16214 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 52 2.36416 0.46656 2.96218 1.48232 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 53 2.88342 2.80170 3.41041 0.16214 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 54 0.11376 3.52718 3.22397 3.26106 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 55 0.86954 1.75337 1.68639 1.50292 58 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 56 3.19410 0.14306 3.76615 2.67147 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 57 2.88342 2.80170 3.41041 0.16214 60 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 58 2.99012 3.90440 0.10685 3.47695 61 G - - _ 1.38629 1.38629 1.38629 1.38629 0.08881 4.11461 2.67874 1.46634 0.26236 1.09861 0.40547 59 0.12704 3.42366 3.13001 3.14672 62 A - - _ 1.38629 1.38629 1.38629 1.38629 0.23257 1.65929 4.06088 0.17224 1.84377 0.38921 1.13194 60 1.70148 1.39538 1.36219 1.15917 64 u - - > 1.38629 1.38629 1.38629 1.38629 0.03321 4.11461 4.11461 1.46634 0.26236 1.09861 0.40547 61 2.96531 1.28818 2.73386 0.49805 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.01674 4.09815 * 1.46634 0.26236 0.00000 * //