INFERNAL1/a [1.1.4 | Dec 2020] NAME snoR43 ACC RF00316 DESC Small nucleolar RNA R43 STATES 223 NODES 68 CLEN 73 W 90 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:31:34 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.035156 CKSUM 1973902349 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 56.10 NC 43.20 EFP7GF -9.1957 0.71875 ECMLC 0.58168 -6.51631 3.14170 1600000 330372 0.003632 ECMGC 0.40318 -15.20515 -1.81179 1600000 88555 0.004517 ECMLI 0.55934 -4.55752 5.05079 1600000 258938 0.004634 ECMGI 0.45737 -9.36567 1.87561 1600000 68386 0.005849 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 90 111 -9.124 -9.063 -0.116 -7.840 -3.906 -8.515 IL 1 1 2 1 6 1 29 92 112 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 29 92 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 74 A U - - MP 3 2 3 7 6 2 30 90 111 -9.030 -8.969 -0.022 -7.746 -8.025 -8.420 -3.486 -2.600 -3.524 3.088 -3.713 -4.753 0.568 -3.583 -3.431 1.410 -3.963 -0.131 0.149 -3.990 -1.375 -2.379 ML 4 2 3 7 6 1 26 89 109 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 25 89 109 -7.785 -6.514 -1.454 -6.492 -0.811 -4.706 -0.433 -0.654 -1.081 1.105 D 6 2 3 7 6 0 22 86 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 28 90 110 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 28 90 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 73 G C - - MP 9 8 6 13 6 2 28 88 109 -9.070 -9.009 -0.022 -7.786 -8.066 -8.461 -4.564 -3.010 -4.649 0.317 -4.983 -4.623 -0.391 -4.878 -4.210 3.593 -4.560 -0.703 -0.781 -4.351 -2.419 -3.528 ML 10 8 6 13 6 1 25 87 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 23 87 107 -7.501 -6.230 -2.139 -6.208 -0.527 -4.422 -0.161 0.612 -0.871 0.044 D 12 8 6 13 6 0 21 85 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 26 88 108 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 26 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 72 a u - - MP 15 14 6 19 4 2 27 86 107 -3.902 -7.055 -0.147 -5.469 -2.683 -2.390 -2.800 2.370 -2.704 -3.720 1.191 0.637 -2.811 1.263 -3.343 -0.340 0.840 -3.025 -0.612 -1.857 ML 16 14 6 19 4 1 24 86 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 4 1 22 85 105 -5.387 -4.416 -2.284 -0.466 -0.190 -0.499 -0.810 0.884 D 18 14 6 19 4 0 21 84 105 -4.568 -4.250 -2.265 -0.520 IL 19 19 5 19 4 1 26 87 107 -1.993 -2.677 -0.825 -5.162 0.000 0.000 0.000 0.000 IR 20 20 6 20 3 1 25 86 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 5 - U - - - ML 21 20 6 23 3 1 25 84 104 -7.872 -0.022 -6.526 -0.824 -0.467 -1.557 1.246 D 22 20 6 23 3 0 20 82 102 -7.048 -2.561 -0.281 IL 23 23 3 23 3 1 24 85 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 6 - g - - - ML 24 23 3 26 3 1 24 83 103 -7.872 -0.022 -6.526 0.240 -0.706 0.537 -0.406 D 25 23 3 26 3 0 20 81 101 -7.048 -0.681 -1.440 IL 26 26 3 26 3 1 23 84 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 7 - A - - - ML 27 26 3 29 3 1 23 81 102 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 28 26 3 29 3 0 18 80 100 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 22 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - U - - - ML 30 29 3 32 3 1 22 80 101 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 31 29 3 32 3 0 17 79 99 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 22 82 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 9 - G - - - ML 33 32 3 35 3 1 22 79 100 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 34 32 3 35 3 0 16 78 98 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 21 81 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 10 - A - - - ML 36 35 3 38 3 1 21 78 98 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 37 35 3 38 3 0 15 77 97 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 20 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 11 - U - - - ML 39 38 3 41 3 1 20 77 97 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 40 38 3 41 3 0 14 76 96 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 19 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 12 - G - - - ML 42 41 3 44 3 1 19 76 96 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 43 41 3 44 3 0 13 75 95 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 13 - A - - - ML 45 44 3 47 3 1 18 75 95 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 46 44 3 47 3 0 13 74 94 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 14 - U - - - ML 48 47 3 50 3 1 18 74 94 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 49 47 3 50 3 0 12 73 93 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 17 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - U - - - ML 51 50 3 53 3 1 17 73 93 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 52 50 3 53 3 0 11 72 92 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 16 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - C - - - ML 54 53 3 56 3 1 16 72 92 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 55 53 3 56 3 0 10 71 91 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 57 56 3 59 3 1 15 71 91 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 58 56 3 59 3 0 10 70 90 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 14 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - A - - - ML 60 59 3 62 3 1 15 70 90 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 61 59 3 62 3 0 9 69 89 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 14 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - U - - - ML 63 62 3 65 3 1 14 69 89 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 64 62 3 65 3 0 8 68 88 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 13 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - A - - - ML 66 65 3 68 3 1 13 68 88 -8.004 -0.020 -6.658 1.304 -1.580 -0.485 -1.054 D 67 65 3 68 3 0 7 66 86 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - u - - - ML 69 68 3 71 3 1 12 67 87 -8.004 -0.020 -6.658 -0.742 0.537 -1.527 0.681 D 70 68 3 71 3 0 6 65 85 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - U - - - ML 72 71 3 74 3 1 12 66 86 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 73 71 3 74 3 0 6 64 84 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 11 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - U - - - ML 75 74 3 77 3 1 11 65 85 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 76 74 3 77 3 0 5 63 83 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 10 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - G - - - ML 78 77 3 80 3 1 10 64 84 -8.004 -0.020 -6.658 -0.684 -2.181 1.498 -1.590 D 79 77 3 80 3 0 4 62 82 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 81 80 3 83 3 1 10 63 82 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 82 80 3 83 3 0 4 61 81 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - U - - - ML 84 83 3 86 3 1 9 62 81 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 85 83 3 86 3 0 3 60 80 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 8 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - a - - - ML 87 86 3 89 3 1 8 61 80 -8.004 -0.020 -6.658 0.875 -1.418 0.302 -0.839 D 88 86 3 89 3 0 2 59 79 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - U - - - ML 90 89 3 92 3 1 8 60 79 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 91 89 3 92 3 0 2 58 78 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 62 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - U - - - ML 93 92 3 95 3 1 7 58 78 -8.004 -0.020 -6.658 -0.918 -0.396 -1.662 1.260 D 94 92 3 95 3 0 1 57 77 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 6 61 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - A - - - ML 96 95 3 98 3 1 6 57 77 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 97 95 3 98 3 0 0 56 76 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 5 59 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 99 98 3 101 3 1 6 56 76 -8.004 -0.020 -6.658 -1.037 1.184 -1.858 -0.051 D 100 98 3 101 3 0 0 55 75 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 58 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - u - - - ML 102 101 3 104 3 1 5 55 75 -8.004 -0.020 -6.658 0.503 -0.858 -1.081 0.640 D 103 101 3 104 3 0 0 54 74 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 4 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - G - - - ML 105 104 3 107 3 1 5 54 74 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 106 104 3 107 3 0 0 53 73 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - A - - - ML 108 107 3 110 3 1 4 53 73 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 109 107 3 110 3 0 0 52 71 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 55 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - C - - - ML 111 110 3 113 3 1 4 52 72 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 112 110 3 113 3 0 0 51 70 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 54 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - c - - - ML 114 113 3 116 3 1 3 51 71 -8.004 -0.020 -6.658 -0.866 0.952 -1.677 0.268 D 115 113 3 116 3 0 0 50 69 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 2 53 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - A - - - ML 117 116 3 119 3 1 3 50 69 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 118 116 3 119 3 0 0 49 68 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 52 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - G - - - ML 120 119 3 122 3 1 2 49 68 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 121 119 3 122 3 0 0 48 67 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 51 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - U - - - ML 123 122 3 125 3 1 2 48 67 -8.004 -0.020 -6.658 -0.619 -1.061 -1.592 1.344 D 124 122 3 125 3 0 0 47 66 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - u - - - ML 126 125 3 128 3 1 2 47 66 -8.004 -0.020 -6.658 -0.393 -0.928 0.177 0.662 D 127 125 3 128 3 0 0 46 65 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - a - - - ML 129 128 3 131 3 1 1 46 65 -8.004 -0.020 -6.658 0.596 -1.103 0.293 -0.326 D 130 128 3 131 3 0 0 44 64 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - g - - - ML 132 131 3 134 3 1 1 45 64 -8.392 -0.018 -6.710 -0.313 0.176 0.199 -0.124 D 133 131 3 134 3 0 0 43 63 -5.620 -0.734 -1.403 IL 134 134 3 134 3 1 1 45 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 71 - G - - MR 135 134 3 137 3 1 1 44 63 -8.392 -0.018 -6.710 -1.665 -2.899 1.742 -2.286 D 136 134 3 137 3 0 0 42 61 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 44 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 70 - A - - MR 138 137 3 140 3 1 1 43 62 -8.392 -0.018 -6.710 1.736 -2.452 -2.076 -2.002 D 139 137 3 140 3 0 0 41 60 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 43 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 69 - G - - MR 141 140 3 143 3 1 1 42 61 -8.392 -0.018 -6.710 -1.665 -2.899 1.742 -2.286 D 142 140 3 143 3 0 0 40 59 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 42 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 68 - U - - MR 144 143 3 146 3 1 1 41 60 -8.392 -0.018 -6.710 -1.560 -1.543 -2.297 1.639 D 145 143 3 146 3 0 0 39 58 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 1 41 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 67 - c - - MR 147 146 3 149 3 1 1 40 59 -8.392 -0.018 -6.710 0.068 0.827 -1.350 -0.350 D 148 146 3 149 3 0 0 38 57 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 1 40 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 47 ] - 66 - C - - MR 150 149 3 152 5 1 1 39 58 -7.128 -0.038 -6.944 -7.156 -8.047 -1.838 1.649 -2.665 -1.232 D 151 149 3 152 5 0 0 37 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 43 65 u a - - MP 153 152 3 157 6 2 2 38 57 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -2.755 -2.781 -2.839 0.645 -2.304 -3.603 1.794 -2.843 -2.866 0.827 -3.372 -0.992 2.020 -3.012 1.495 -0.731 ML 154 152 3 157 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 37 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 44 64 A U - - MP 159 158 6 163 6 2 2 36 55 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -3.866 -2.878 -3.879 3.378 -4.254 -5.323 0.051 -3.916 -3.767 0.998 -4.319 -0.342 -0.366 -4.499 -1.890 -2.708 ML 160 158 6 163 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 35 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 45 63 G C - - MP 165 164 6 169 6 2 2 34 53 -9.124 -9.063 -0.021 -7.840 -8.119 -8.515 -3.474 -2.484 -3.472 0.974 -3.922 -4.009 0.399 -3.929 -3.600 3.165 -3.975 0.127 0.124 -1.557 -1.501 -2.497 ML 166 164 6 169 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 33 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 33 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 46 62 c g - - MP 171 170 6 175 4 2 2 32 51 -6.991 -7.198 -0.052 -5.612 -3.286 -3.331 -3.272 0.223 0.080 -3.929 2.901 -3.090 -3.293 0.350 -3.738 -1.491 1.181 -3.497 0.533 -2.249 ML 172 170 6 175 4 1 1 32 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 47 - U - - - ML 177 176 6 179 3 1 1 29 48 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 178 176 6 179 3 0 0 28 47 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 48 - G - - - ML 180 179 3 182 3 1 1 28 47 -8.004 -0.020 -6.658 -0.901 -2.339 1.570 -1.746 D 181 179 3 182 3 0 0 27 46 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 49 - A - - - ML 183 182 3 185 3 1 1 27 46 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 184 182 3 185 3 0 0 26 45 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 50 - A - - - ML 186 185 3 188 3 1 1 26 45 -8.004 -0.020 -6.658 1.493 -1.809 -1.002 -1.321 D 187 185 3 188 3 0 0 25 44 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 51 - G - - - ML 189 188 3 191 3 1 1 25 43 -8.004 -0.020 -6.658 -1.014 -1.965 1.470 -1.065 D 190 188 3 191 3 0 0 24 43 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 52 - A - - - ML 192 191 3 194 3 1 1 23 42 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 193 191 3 194 3 0 0 22 41 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 53 - u - - - ML 195 194 3 197 3 1 1 22 41 -8.004 -0.020 -6.658 -0.737 0.417 -1.515 0.778 D 196 194 3 197 3 0 0 21 40 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 54 - A - - - ML 198 197 3 200 3 1 1 21 40 -8.004 -0.020 -6.658 1.736 -2.452 -2.076 -2.002 D 199 197 3 200 3 0 0 20 39 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 55 - A - - - ML 201 200 3 203 3 1 1 20 39 -8.004 -0.020 -6.658 1.426 -1.158 -1.422 -1.024 D 202 200 3 203 3 0 0 19 38 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 56 - U - - - ML 204 203 3 206 3 1 1 19 37 -8.004 -0.020 -6.658 -1.560 -1.543 -2.297 1.639 D 205 203 3 206 3 0 0 18 37 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 57 - C - - - ML 207 206 3 209 3 1 1 17 36 -8.004 -0.020 -6.658 -0.696 1.292 -1.819 -0.621 D 208 206 3 209 3 0 0 17 36 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 58 - G - - - ML 210 209 3 212 3 1 1 16 35 -8.004 -0.020 -6.658 -1.665 -2.899 1.742 -2.286 D 211 209 3 212 3 0 0 16 34 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 59 - C - - - ML 213 212 3 215 3 1 1 15 33 -8.004 -0.020 -6.658 -1.838 1.649 -2.665 -1.232 D 214 212 3 215 3 0 0 15 33 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 60 - a - - - ML 216 215 3 218 3 1 1 13 31 -8.004 -0.020 -6.658 0.763 0.105 -1.123 -0.379 D 217 215 3 218 3 0 0 13 32 -6.174 -1.687 -0.566 IL 218 218 3 218 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 61 - U - - - ML 219 218 3 221 2 1 1 1 1 * 0.000 -1.560 -1.543 -2.297 1.639 D 220 218 3 221 2 0 0 0 0 * 0.000 IL 221 221 3 221 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 67 ] - - - - - - E 222 221 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME snoR43 ACC RF00316 DESC Small nucleolar RNA R43 LENG 73 MAXL 160 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:31:34 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 16 EFFN 2.332031 CKSUM 1973902349 STATS LOCAL MSV -8.3258 0.71875 STATS LOCAL VITERBI -9.1689 0.71875 STATS LOCAL FORWARD -3.3007 0.71875 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.25305 1.66705 1.49091 1.20265 1.38629 1.38629 1.38629 1.38629 0.22750 3.92768 1.69397 1.46634 0.26236 0.00000 * 1 0.51855 2.37319 1.54344 2.32493 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04825 3.74844 3.74844 1.46634 0.26236 0.92294 0.50642 2 2.46454 3.03832 0.20271 2.98542 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04449 3.82774 3.82774 1.46634 0.26236 2.05805 0.13662 3 1.00051 1.35073 1.57792 1.79063 3 a - - < 1.38629 1.38629 1.38629 1.38629 0.10803 2.51776 3.82774 0.47309 0.97571 2.05805 0.13662 4 2.02777 1.73166 2.53983 0.49021 5 U - - - 1.38629 1.38629 1.38629 1.38629 0.04449 3.82774 3.82774 1.46634 0.26236 2.05805 0.13662 5 1.22880 1.89048 0.98127 1.70636 6 g - - - 1.38629 1.38629 1.38629 1.38629 0.04449 3.82774 3.82774 1.46634 0.26236 0.29491 1.36491 6 0.15568 3.23494 2.95944 2.93835 7 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 7 2.60586 2.57052 3.12310 0.21611 8 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 8 2.69584 3.57310 0.14904 3.14861 9 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 9 0.15568 3.23494 2.95944 2.93835 10 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 10 2.60586 2.57052 3.12310 0.21611 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 11 2.69584 3.57310 0.14904 3.14861 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 12 0.15568 3.23494 2.95944 2.93835 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 13 2.60586 2.57052 3.12310 0.21611 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 14 2.60586 2.57052 3.12310 0.21611 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 15 2.84105 0.20245 3.41704 2.38487 16 C - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 16 2.60586 2.57052 3.12310 0.21611 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 17 0.15568 3.23494 2.95944 2.93835 18 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 18 2.60586 2.57052 3.12310 0.21611 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 19 0.45464 2.55758 1.73105 2.20062 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 20 1.96215 0.98452 2.51439 0.90409 21 u - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 21 2.60586 2.57052 3.12310 0.21611 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 22 2.60586 2.57052 3.12310 0.21611 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 23 1.92536 3.01278 0.31277 2.60910 24 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 24 0.15568 3.23494 2.95944 2.93835 25 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 25 2.60586 2.57052 3.12310 0.21611 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 26 0.75934 2.43635 1.15739 2.03838 27 a - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 27 2.60586 2.57052 3.12310 0.21611 28 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 28 2.10005 1.67715 2.61917 0.48162 29 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 29 0.15568 3.23494 2.95944 2.93835 30 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 30 2.19604 0.52365 2.77542 1.45210 31 C - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 31 1.02769 2.01777 2.17436 0.92752 32 u - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 32 2.69584 3.57310 0.14904 3.14861 33 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 33 0.15568 3.23494 2.95944 2.93835 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 34 2.84105 0.20245 3.41704 2.38487 35 C - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 35 2.06082 0.68735 2.63230 1.21123 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 36 0.15568 3.23494 2.95944 2.93835 37 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 37 2.69584 3.57310 0.14904 3.14861 38 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 38 1.87059 2.18942 2.57332 0.41900 39 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 39 1.69789 2.07043 1.24451 0.90952 40 u - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 40 0.96526 2.18934 1.16334 1.63638 41 a - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 41 1.64082 1.24345 1.22237 1.49943 42 g - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 42 2.10832 1.44567 1.90448 0.70508 43 u - - < 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 43 0.34384 2.76651 1.82784 2.69833 44 A - - < 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 44 1.95426 2.43286 0.42589 2.14255 45 G - - < 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 45 2.42724 0.58120 2.24170 1.40155 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 46 2.60586 2.57052 3.12310 0.21611 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 47 2.09211 3.13435 0.26432 2.72852 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 48 0.15568 3.23494 2.95944 2.93835 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 49 0.32263 2.73032 2.11890 2.40352 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 50 2.18732 2.85541 0.32930 2.19982 51 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 51 0.15568 3.23494 2.95944 2.93835 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 52 1.95802 1.07196 2.50470 0.83281 53 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 53 0.15568 3.23494 2.95944 2.93835 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 54 0.36702 2.22724 2.44926 2.18020 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 55 2.60586 2.57052 3.12310 0.21611 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 56 1.94062 0.44157 2.75924 1.89699 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 57 2.69584 3.57310 0.14904 3.14861 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 58 2.84105 0.20245 3.41704 2.38487 59 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 59 0.83669 1.29470 2.21545 1.69407 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 60 2.60586 2.57052 3.12310 0.21611 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 61 1.50902 2.40958 0.54578 2.21065 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 62 2.54433 0.48856 2.24653 1.59850 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 63 2.93159 2.12214 2.58078 0.28609 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 64 1.24002 2.07275 0.88477 1.76042 65 g - - > 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 65 2.84105 0.20245 3.41704 2.38487 66 C - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 66 1.35211 0.77071 2.39041 1.67648 67 c - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 67 2.60586 2.57052 3.12310 0.21611 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 68 2.69584 3.57310 0.14904 3.14861 69 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 69 0.15568 3.23494 2.95944 2.93835 70 A - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 70 2.69584 3.57310 0.14904 3.14861 71 G - - - 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 71 2.01169 1.79270 1.69314 0.66206 72 U - - > 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 72 3.06477 0.25617 2.82989 2.11769 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.04017 3.92768 3.92768 1.46634 0.26236 1.09861 0.40547 73 2.48682 1.80497 2.19265 0.44515 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.02029 3.90780 * 1.46634 0.26236 0.00000 * //