INFERNAL1/a [1.1.4 | Dec 2020] NAME snoR60 ACC RF00339 DESC Small nucleolar RNA snoR60 STATES 220 NODES 70 CLEN 72 W 92 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:32:49 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 10 EFFN 2.094727 CKSUM 1389420014 NULL 0.000 0.000 0.000 0.000 GA 40.00 TC 41.00 NC 39.20 EFP7GF -9.5380 0.71875 ECMLC 0.66808 -5.61095 2.83155 1600000 337859 0.003552 ECMGC 0.41445 -17.12761 -3.94020 1600000 94563 0.004230 ECMLI 0.63646 -3.79659 4.55262 1600000 243773 0.004923 ECMGI 0.43378 -11.60586 0.15684 1600000 65771 0.006082 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 92 114 -7.014 -7.221 -0.051 -5.635 IL 1 1 2 1 4 1 29 95 117 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 29 95 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 5 1 29 92 114 -7.147 -0.038 -6.963 -7.175 -8.067 0.395 0.114 -1.052 0.165 D 4 2 3 5 5 0 22 91 113 -4.959 -0.803 -4.221 -2.596 -2.508 IL 5 5 3 5 5 1 27 92 114 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 77 u a - - MP 6 5 3 10 6 2 29 91 113 -9.133 -9.072 -0.021 -7.849 -8.129 -8.524 -1.898 -2.016 -2.077 1.064 -1.944 -2.915 1.619 -2.339 -1.208 1.108 -2.684 -0.099 1.866 -2.214 0.434 -0.725 ML 7 5 3 10 6 1 24 89 111 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 23 89 111 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 19 87 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 26 91 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 26 90 112 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 76 G C - - MP 12 11 6 16 6 2 27 89 111 -9.133 -9.072 -0.021 -7.849 -8.129 -8.524 -4.383 -2.899 -4.436 0.500 -5.103 -4.630 -0.454 -4.794 -4.164 3.511 -4.526 0.129 -0.750 -4.219 -2.466 -3.329 ML 13 11 6 16 6 1 23 88 110 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 22 87 109 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 18 85 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 25 89 111 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 25 88 110 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 75 C G - - MP 18 17 6 22 6 2 25 87 109 -9.133 -9.072 -0.021 -7.849 -8.129 -8.524 -4.687 -4.605 -4.354 -0.825 -3.042 -4.748 3.591 -3.866 -4.408 -0.604 -4.654 -2.554 0.458 -4.747 -0.752 -3.243 ML 19 17 6 22 6 1 22 86 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 21 86 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 18 84 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 23 87 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 23 86 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 5 74 A U - - MP 24 23 6 28 4 2 24 85 107 -7.014 -7.221 -0.051 -5.635 -3.905 -2.908 -3.915 3.401 -4.310 -5.384 -0.003 -3.949 -3.802 0.956 -4.355 -0.365 -0.419 -4.552 -1.943 -2.742 ML 25 23 6 28 4 1 21 85 107 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 19 84 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 18 83 105 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 23 86 108 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 22 85 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 30 29 6 32 3 1 22 83 105 -8.026 -0.020 -6.680 0.704 -0.881 -0.586 0.216 D 31 29 6 32 3 0 17 81 103 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 21 84 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 33 32 3 35 3 1 21 82 104 -8.026 -0.020 -6.680 1.468 -1.781 -0.905 -1.289 D 34 32 3 35 3 0 16 80 102 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 20 83 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 36 35 3 38 3 1 20 81 103 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 37 35 3 38 3 0 15 79 101 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 20 82 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - G - - - ML 39 38 3 41 3 1 19 80 102 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 40 38 3 41 3 0 15 78 100 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 19 81 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - A - - - ML 42 41 3 44 3 1 18 79 101 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 43 41 3 44 3 0 14 77 99 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 18 80 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - U - - - ML 45 44 3 47 3 1 17 78 100 -8.026 -0.020 -6.680 -1.099 -0.764 -1.836 1.414 D 46 44 3 47 3 0 13 76 98 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 17 79 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 48 47 3 50 3 1 17 77 98 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 49 47 3 50 3 0 13 75 97 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 16 78 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - A - - - ML 51 50 3 53 3 1 16 76 97 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 52 50 3 53 3 0 12 74 96 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 16 77 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - g - - - ML 54 53 3 56 3 1 15 75 96 -4.104 -0.271 -3.146 -0.110 -0.999 0.541 0.161 D 55 53 3 56 3 0 11 73 95 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 15 76 97 -1.620 -0.679 -4.320 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - c - - - ML 57 56 3 59 3 1 15 73 95 -7.869 -0.022 -6.523 -0.653 0.625 -1.432 0.537 D 58 56 3 59 3 0 10 72 94 -7.171 -0.611 -1.563 IL 59 59 3 59 3 1 14 75 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - U - - - ML 60 59 3 62 3 1 14 72 94 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 61 59 3 62 3 0 8 71 93 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 13 74 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - U - - - ML 63 62 3 65 3 1 14 71 93 -8.026 -0.020 -6.680 -0.546 -1.050 -1.563 1.318 D 64 62 3 65 3 0 8 70 92 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 12 73 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 19 - A - - - ML 66 65 3 68 3 1 13 70 92 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 67 65 3 68 3 0 7 69 91 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 12 72 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 20 - C - - - ML 69 68 3 71 3 1 12 69 91 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 70 68 3 71 3 0 6 68 89 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 11 71 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 21 - U - - - ML 72 71 3 74 3 1 11 68 90 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 73 71 3 74 3 0 5 67 88 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 70 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 22 - c - - - ML 75 74 3 77 3 1 11 67 89 -8.026 -0.020 -6.680 -0.848 0.886 -1.657 0.355 D 76 74 3 77 3 0 5 66 87 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 69 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 23 - G - - - ML 78 77 3 80 3 1 10 66 88 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 79 77 3 80 3 0 4 65 86 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 9 68 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 24 - G - - - ML 81 80 3 83 3 1 9 65 87 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 82 80 3 83 3 0 3 64 85 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 67 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 25 - A - - - ML 84 83 3 86 3 1 9 64 86 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 85 83 3 86 3 0 2 63 84 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 66 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 26 - U - - - ML 87 86 3 89 3 1 8 63 85 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 88 86 3 89 3 0 2 62 83 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 7 65 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 27 - U - - - ML 90 89 3 92 3 1 7 62 84 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 91 89 3 92 3 0 1 61 82 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 64 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 28 - C - - - ML 93 92 3 95 3 1 7 61 83 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 94 92 3 95 3 0 0 60 81 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 63 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 29 - C - - - ML 96 95 3 98 3 1 6 60 82 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 97 95 3 98 3 0 0 59 80 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 62 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - C - - - ML 99 98 3 101 3 1 5 59 81 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 100 98 3 101 3 0 0 57 79 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 61 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - C - - - ML 102 101 3 104 3 1 5 58 80 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 103 101 3 104 3 0 0 56 78 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 60 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 32 - U - - - ML 105 104 3 107 3 1 4 57 79 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 106 104 3 107 3 0 0 55 77 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 59 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 33 - U - - - ML 108 107 3 110 3 1 4 56 78 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 109 107 3 110 3 0 0 54 76 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 58 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 34 - C - - - ML 111 110 3 113 3 1 3 55 77 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 112 110 3 113 3 0 0 53 75 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 57 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 35 - A - - - ML 114 113 3 116 3 1 3 54 76 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 115 113 3 116 3 0 0 52 74 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 56 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 36 - G - - - ML 117 116 3 119 3 1 2 53 75 -8.026 -0.020 -6.680 -0.132 -1.828 1.252 -1.240 D 118 116 3 119 3 0 0 51 73 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 55 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 37 - g - - - ML 120 119 3 122 3 1 2 52 74 -8.026 -0.020 -6.680 0.278 -1.601 0.971 -1.010 D 121 119 3 122 3 0 0 50 72 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 54 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 38 - A - - - ML 123 122 3 125 3 1 2 51 72 -8.026 -0.020 -6.680 1.193 -1.206 -1.241 -0.221 D 124 122 3 125 3 0 0 49 71 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 53 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 39 - C - - - ML 126 125 3 128 3 1 1 50 71 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 127 125 3 128 3 0 0 48 70 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 51 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 40 - A - - - ML 129 128 3 131 3 1 1 49 70 -8.026 -0.020 -6.680 1.182 -1.195 -1.234 -0.203 D 130 128 3 131 3 0 0 47 69 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 50 72 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 41 - U - - - ML 132 131 3 134 3 1 1 48 69 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 133 131 3 134 3 0 0 46 68 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 49 71 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 42 - u - - - ML 135 134 3 137 3 1 1 47 68 -2.236 -0.362 -6.680 -0.269 0.372 -1.252 0.542 D 136 134 3 137 3 0 0 44 66 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 47 68 -2.032 -0.478 -4.732 0.000 0.000 0.000 0.000 [ MATL 42 ] 44 - A - - - ML 138 137 3 140 3 1 1 45 67 -2.716 -0.255 -6.680 1.173 -1.185 -1.228 -0.186 D 139 137 3 140 3 0 0 42 63 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 46 68 -1.240 -0.879 -4.923 0.000 0.000 0.000 0.000 [ MATL 43 ] 47 - U - - - ML 141 140 3 143 3 1 1 41 61 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 142 140 3 143 3 0 0 40 60 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 48 - G - - - ML 144 143 3 146 3 1 1 40 60 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 145 143 3 146 3 0 0 39 59 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 49 - G - - - ML 147 146 3 149 3 1 1 39 59 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 148 146 3 149 3 0 0 38 57 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 50 - g - - - ML 150 149 3 152 3 1 1 38 58 -8.026 -0.020 -6.680 0.462 -1.522 0.807 -0.931 D 151 149 3 152 3 0 0 37 56 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 40 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 51 - U - - - ML 153 152 3 155 3 1 1 37 56 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 154 152 3 155 3 0 0 36 55 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 39 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 52 - G - - - ML 156 155 3 158 3 1 1 36 55 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 157 155 3 158 3 0 0 35 54 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 38 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 53 - A - - - ML 159 158 3 161 3 1 1 35 54 -8.026 -0.020 -6.680 1.408 -1.494 -1.441 -0.681 D 160 158 3 161 3 0 0 34 53 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 37 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - U - - - ML 162 161 3 164 3 1 1 34 53 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 163 161 3 164 3 0 0 33 52 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - G - - - ML 165 164 3 167 3 1 1 33 52 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 166 164 3 167 3 0 0 32 51 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 35 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - c - - - ML 168 167 3 170 3 1 1 32 51 -8.026 -0.020 -6.680 -0.851 0.891 -1.660 0.350 D 169 167 3 170 3 0 0 31 50 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - A - - - ML 171 170 3 173 3 1 1 31 50 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 172 170 3 173 3 0 0 29 49 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 58 - A - - - ML 174 173 3 176 3 1 1 30 49 -8.026 -0.020 -6.680 1.280 -1.575 -0.412 -1.046 D 175 173 3 176 3 0 0 28 47 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 59 - A - - - ML 177 176 3 179 3 1 1 28 47 -2.551 -0.287 -6.680 1.428 -1.530 -1.466 -0.734 D 178 176 3 179 3 0 0 26 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 29 48 -1.932 -0.520 -4.632 0.000 0.000 0.000 0.000 [ MATL 56 ] 61 - u - - - ML 180 179 3 182 3 1 1 27 46 -8.026 -0.020 -6.680 -0.293 -0.024 -1.253 0.833 D 181 179 3 182 3 0 0 26 45 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 62 - u - - - ML 183 182 3 185 3 1 1 26 45 -8.026 -0.020 -6.680 -0.761 0.298 -1.534 0.876 D 184 182 3 185 3 0 0 25 44 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 63 - C - - - ML 186 185 3 188 3 1 1 25 43 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 187 185 3 188 3 0 0 24 43 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 64 - g - - - ML 189 188 3 191 3 1 1 23 42 -8.026 -0.020 -6.680 0.278 -1.601 0.971 -1.010 D 190 188 3 191 3 0 0 22 41 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 65 - A - - - ML 192 191 3 194 3 1 1 22 41 -8.026 -0.020 -6.680 1.744 -2.496 -2.116 -2.051 D 193 191 3 194 3 0 0 21 40 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 66 - G - - - ML 195 194 3 197 3 1 1 21 40 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 196 194 3 197 3 0 0 20 39 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 67 - U - - - ML 198 197 3 200 3 1 1 20 39 -8.026 -0.020 -6.680 -0.415 -0.539 -1.372 1.121 D 199 197 3 200 3 0 0 19 38 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 68 - U - - - ML 201 200 3 203 3 1 1 19 37 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 202 200 3 203 3 0 0 18 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 69 - U - - - ML 204 203 3 206 3 1 1 17 36 -8.026 -0.020 -6.680 -0.925 -0.359 -1.671 1.251 D 205 203 3 206 3 0 0 17 36 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 70 - C - - - ML 207 206 3 209 3 1 1 16 35 -8.026 -0.020 -6.680 -1.892 1.662 -2.720 -1.275 D 208 206 3 209 3 0 0 16 34 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 71 - U - - - ML 210 209 3 212 3 1 1 15 33 -8.026 -0.020 -6.680 -1.601 -1.577 -2.340 1.650 D 211 209 3 212 3 0 0 15 33 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 72 - G - - - ML 213 212 3 215 3 1 1 13 31 -8.026 -0.020 -6.680 -1.712 -2.952 1.752 -2.340 D 214 212 3 215 3 0 0 13 32 -6.174 -1.687 -0.566 IL 215 215 3 215 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 73 - A - - - ML 216 215 3 218 2 1 1 1 1 * 0.000 1.744 -2.496 -2.116 -2.051 D 217 215 3 218 2 0 0 0 0 * 0.000 IL 218 218 3 218 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 69 ] - - - - - - E 219 218 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME snoR60 ACC RF00339 DESC Small nucleolar RNA snoR60 LENG 72 MAXL 158 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:32:49 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 10 EFFN 2.241211 CKSUM 1389420014 STATS LOCAL MSV -8.6214 0.71875 STATS LOCAL VITERBI -9.2815 0.71875 STATS LOCAL FORWARD -3.6878 0.71875 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.35239 1.52643 1.45217 1.23785 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 0.00000 * 1 1.10947 1.29856 2.13315 1.27698 1 a - - : 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 2 1.72326 1.48368 1.47493 1.00534 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 3 2.28990 2.98558 0.23393 2.86835 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 4 3.14967 0.25236 2.91654 2.07108 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 5 0.36259 2.71352 1.78964 2.64778 5 A - - < 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 6 0.89124 2.01192 1.79805 1.23616 6 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 7 0.35469 2.66394 2.02912 2.32807 7 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 8 2.56429 2.53606 3.07979 0.22580 8 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 9 2.64988 3.52071 0.15719 3.09623 9 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 10 0.16339 3.19046 2.91934 2.88931 10 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 11 2.19240 1.93630 2.70488 0.38974 11 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 12 2.64988 3.52071 0.15719 3.09623 12 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 13 0.16339 3.19046 2.91934 2.88931 13 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 14 1.47261 2.09704 0.99707 1.27692 14 g - - _ 1.38629 1.38629 1.38629 1.38629 0.23559 2.54624 2.02863 0.43571 1.04073 1.09861 0.40547 15 1.86585 0.93677 2.40976 1.01196 16 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04443 3.82901 3.82901 1.46634 0.26236 0.25726 1.48354 16 2.56429 2.53606 3.07979 0.22580 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 17 1.78876 2.14618 2.50922 0.45480 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 18 0.16339 3.19046 2.91934 2.88931 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 19 2.78708 0.21372 3.36249 2.34158 20 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 20 2.56429 2.53606 3.07979 0.22580 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 21 2.00921 0.75331 2.57450 1.14286 22 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 22 2.64988 3.52071 0.15719 3.09623 23 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 23 2.64988 3.52071 0.15719 3.09623 24 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 24 0.16339 3.19046 2.91934 2.88931 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 25 2.56429 2.53606 3.07979 0.22580 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 26 2.56429 2.53606 3.07979 0.22580 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 27 2.78708 0.21372 3.36249 2.34158 28 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 28 2.78708 0.21372 3.36249 2.34158 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 29 2.78708 0.21372 3.36249 2.34158 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 30 2.78708 0.21372 3.36249 2.34158 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 31 2.56429 2.53606 3.07979 0.22580 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 32 2.56429 2.53606 3.07979 0.22580 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 33 2.78708 0.21372 3.36249 2.34158 34 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 34 0.16339 3.19046 2.91934 2.88931 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 35 1.49103 2.69726 0.50021 2.29198 36 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 36 1.19519 2.53275 0.69613 2.12523 37 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 37 0.54621 2.24700 2.27451 1.54977 38 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 38 2.78708 0.21372 3.36249 2.34158 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 39 0.55351 2.23930 2.26919 1.53645 40 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 40 2.56429 2.53606 3.07979 0.22580 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 41 1.58491 1.11530 2.27709 1.00886 42 u - - _ 1.38629 1.38629 1.38629 1.38629 0.30834 1.40227 3.94805 0.15006 1.97082 1.09861 0.40547 42 0.56030 2.23231 2.26437 1.52423 44 A - - _ 1.38629 1.38629 1.38629 1.38629 0.22304 1.71132 3.94805 0.76835 0.62321 1.09861 0.40547 43 2.56429 2.53606 3.07979 0.22580 47 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 44 2.64988 3.52071 0.15719 3.09623 48 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 45 2.64988 3.52071 0.15719 3.09623 49 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 46 1.06342 2.47639 0.81121 2.06861 50 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 47 2.56429 2.53606 3.07979 0.22580 51 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 48 2.64988 3.52071 0.15719 3.09623 52 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 49 0.39606 2.45521 2.42159 1.88117 53 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 50 2.56429 2.53606 3.07979 0.22580 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 51 2.64988 3.52071 0.15719 3.09623 55 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 52 2.01087 0.74985 2.57638 1.14683 56 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 53 0.16339 3.19046 2.91934 2.88931 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 54 0.48536 2.51522 1.67462 2.15159 58 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 55 0.38186 2.48124 2.44002 1.91997 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.24846 1.60589 3.94805 0.18226 1.79206 1.09861 0.40547 56 1.60184 1.39818 2.27721 0.80105 61 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 57 1.94398 1.16932 2.48334 0.77041 62 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 58 2.78708 0.21372 3.36249 2.34158 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 59 1.19519 2.53275 0.69613 2.12523 64 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 60 0.16339 3.19046 2.91934 2.88931 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 61 2.64988 3.52071 0.15719 3.09623 66 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 62 1.69165 1.77057 2.36550 0.59485 67 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 63 2.56429 2.53606 3.07979 0.22580 68 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 64 2.06511 1.64215 2.58406 0.50391 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 65 2.78708 0.21372 3.36249 2.34158 70 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 66 2.56429 2.53606 3.07979 0.22580 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 67 2.64988 3.52071 0.15719 3.09623 72 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 68 0.16339 3.19046 2.91934 2.88931 73 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 69 2.87512 2.07803 2.52555 0.30327 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 70 2.34800 3.08309 0.21828 2.90550 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 71 3.08611 0.31333 2.80617 1.81479 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.03935 3.94805 3.94805 1.46634 0.26236 1.09861 0.40547 72 1.23581 1.77146 1.20579 1.42771 77 g - - > 1.38629 1.38629 1.38629 1.38629 0.01987 3.92857 * 1.46634 0.26236 0.00000 * //