INFERNAL1/a [1.1.4 | Dec 2020] NAME UnaL2 ACC RF00436 DESC UnaL2 LINE 3' element STATES 166 NODES 46 CLEN 54 W 69 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:38:23 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 30 EFFN 5.086670 CKSUM 3902131467 NULL 0.000 0.000 0.000 0.000 GA 55.00 TC 55.00 NC 54.90 EFP7GF -12.9148 0.71929 ECMLC 0.59041 -5.58303 4.21355 1600000 390077 0.003076 ECMGC 0.45882 -13.50490 -0.92208 1600000 128636 0.003110 ECMLI 0.59732 -3.43387 5.02104 1600000 187283 0.006407 ECMGI 0.47470 -10.93570 0.78939 1600000 104546 0.003826 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 69 88 -7.871 -8.078 -0.028 -6.493 IL 1 1 2 1 4 1 16 73 93 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 1 16 69 88 -8.838 -0.011 -7.492 0.365 -1.164 -0.616 0.690 D 4 2 3 5 3 0 10 68 87 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 15 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 1 15 68 87 -8.838 -0.011 -7.492 0.217 -1.118 0.595 -0.206 D 7 5 3 8 3 0 9 67 86 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 14 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 14 67 86 -8.838 -0.011 -7.492 -0.673 0.711 -0.733 0.182 D 10 8 3 11 3 0 8 66 85 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 13 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - a - - - ML 12 11 3 14 3 1 14 66 85 -8.838 -0.011 -7.492 0.800 -1.240 -0.665 0.269 D 13 11 3 14 3 0 7 65 84 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 12 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - c - - - ML 15 14 3 17 3 1 13 65 84 -8.838 -0.011 -7.492 0.024 0.513 -1.589 0.291 D 16 14 3 17 3 0 6 64 83 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 11 67 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 1 12 64 83 -8.838 -0.011 -7.492 0.797 -1.080 -0.202 -0.120 D 19 17 3 20 3 0 5 63 82 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 11 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - C - - - ML 21 20 3 23 3 1 11 63 82 -8.838 -0.011 -7.492 -0.101 1.129 -2.076 -0.636 D 22 20 3 23 3 0 4 62 81 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 10 65 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 10 62 81 -8.838 -0.011 -7.492 1.316 -0.513 -1.820 -0.926 D 25 23 3 26 3 0 3 61 80 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 9 64 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - u - - - ML 27 26 3 29 3 1 9 61 80 -8.838 -0.011 -7.492 0.061 -0.468 -0.249 0.477 D 28 26 3 29 3 0 3 60 79 -6.174 -1.687 -0.566 IL 29 29 3 29 3 1 8 63 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - g - - - ML 30 29 3 32 3 1 8 60 79 -8.838 -0.011 -7.492 0.101 -1.354 0.571 0.072 D 31 29 3 32 3 0 2 59 78 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 7 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - u - - - ML 33 32 3 35 3 1 8 59 78 -8.838 -0.011 -7.492 0.571 -0.845 -1.418 0.663 D 34 32 3 35 3 0 1 58 77 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 6 61 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - u - - - ML 36 35 3 38 3 1 7 58 77 -9.185 -0.010 -7.503 -0.155 0.212 -0.370 0.226 D 37 35 3 38 3 0 1 57 76 -5.620 -0.734 -1.403 IL 38 38 3 38 3 1 5 59 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 57 - a - - MR 39 38 3 41 3 1 6 57 76 -9.185 -0.010 -7.503 0.891 -1.280 -0.964 0.288 D 40 38 3 41 3 0 0 55 74 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 4 58 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 56 - u - - MR 42 41 3 44 3 1 5 56 75 -9.185 -0.010 -7.503 0.632 -1.224 -1.100 0.638 D 43 41 3 44 3 0 0 54 73 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 3 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 55 - A - - MR 45 44 3 47 3 1 5 55 74 -9.185 -0.010 -7.503 1.011 -1.456 -1.609 0.370 D 46 44 3 47 3 0 0 53 72 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 3 56 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 54 - U - - MR 48 47 3 50 3 1 4 54 73 -9.185 -0.010 -7.503 -1.095 -1.521 -0.141 1.187 D 49 47 3 50 3 0 0 52 71 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 2 55 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 53 - u - - MR 51 50 3 53 3 1 4 53 72 -9.185 -0.010 -7.503 0.581 -1.227 -1.149 0.702 D 52 50 3 53 3 0 0 51 70 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 2 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 52 - C - - MR 54 53 3 56 3 1 3 52 71 -9.185 -0.010 -7.503 -1.976 1.764 -3.453 -1.953 D 55 53 3 56 3 0 0 50 69 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 53 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 51 - g - - MR 57 56 3 59 3 1 3 51 70 -9.185 -0.010 -7.503 0.148 -0.507 0.721 -0.890 D 58 56 3 59 3 0 0 49 68 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 52 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 50 - G - - MR 60 59 3 62 3 1 2 50 69 -9.185 -0.010 -7.503 -1.409 -2.921 1.697 -2.001 D 61 59 3 62 3 0 0 48 67 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 1 51 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 49 - U - - MR 63 62 3 65 3 1 2 49 68 -9.185 -0.010 -7.503 -3.114 -2.853 -3.896 1.879 D 64 62 3 65 3 0 0 47 66 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 1 50 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 48 - A - - MR 66 65 3 68 3 1 2 48 67 -9.185 -0.010 -7.503 1.919 -4.068 -3.557 -3.770 D 67 65 3 68 3 0 0 46 65 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 1 49 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 47 - A - - MR 69 68 3 71 5 1 1 47 66 -7.881 -0.022 -7.697 -7.909 -8.801 1.919 -4.068 -3.557 -3.770 D 70 68 3 71 5 0 0 46 64 -5.352 -0.707 -2.978 -4.409 -2.404 IR 71 71 3 71 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 13 46 U A - - MP 72 71 3 76 4 2 2 46 65 -7.731 -8.977 -0.044 -5.430 -6.580 -6.434 -6.140 -2.658 -4.710 -6.487 -0.397 -5.528 -6.129 -2.631 -6.400 -4.305 3.856 -6.584 -2.322 -4.491 ML 73 71 3 76 4 1 1 45 64 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 74 71 3 76 4 1 1 45 64 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 75 71 3 76 4 0 0 43 62 -12.737 -14.007 -2.036 -0.404 IL 76 76 5 76 4 1 1 45 64 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 1 46 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 45 - U - - MR 78 77 6 80 5 1 1 44 63 -7.881 -0.022 -7.697 -7.909 -8.801 -1.619 -1.481 -1.547 1.573 D 79 77 6 80 5 0 0 42 61 -5.352 -0.707 -2.978 -4.409 -2.404 IR 80 80 3 80 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 14 44 G C - - MP 81 80 3 85 6 2 2 43 62 -5.126 -9.471 -0.056 -8.248 -8.528 -8.923 -6.373 -3.906 -6.856 -0.980 -7.452 -5.296 -2.417 -7.057 -5.257 3.868 -5.511 -1.706 -2.778 -5.490 -4.582 -5.712 ML 82 80 3 85 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 3 85 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 3 85 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 43 62 -1.706 -3.624 -0.856 -5.279 -6.055 -5.716 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 42 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 17 43 U G - - MP 87 86 6 91 6 2 2 40 59 -9.532 -9.471 -0.016 -8.248 -8.528 -8.923 -5.591 -5.571 -5.009 -1.821 -3.465 -5.251 0.829 -4.326 -5.069 -1.848 -5.241 -3.567 -0.166 -5.548 3.621 -3.891 ML 88 86 6 91 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 40 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 18 42 A U - - MP 93 92 6 97 4 2 2 38 57 -4.603 -8.078 -0.083 -6.493 -5.453 -4.200 -5.164 3.841 -6.554 -7.852 -2.163 -5.102 -5.221 -0.743 -5.835 -1.500 -2.540 -6.656 -4.083 -4.057 ML 94 92 6 97 4 1 1 38 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 96 92 6 97 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 97 97 5 97 4 1 1 39 58 -2.071 -2.754 -0.768 -5.240 0.000 0.000 0.000 0.000 IR 98 98 6 98 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 20 - A - - - ML 99 98 6 101 3 1 1 35 54 -8.838 -0.011 -7.492 1.659 -1.698 -2.285 -1.605 D 100 98 6 101 3 0 0 34 53 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 21 - G - - - ML 102 101 3 104 3 1 1 34 53 -8.838 -0.011 -7.492 -2.205 -4.014 1.859 -3.435 D 103 101 3 104 3 0 0 33 52 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 22 - U - - - ML 105 104 3 107 3 1 1 33 52 -9.185 -0.010 -7.503 -1.822 -2.137 -2.937 1.748 D 106 104 3 107 3 0 0 32 51 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 41 - C - - MR 108 107 3 110 3 1 1 32 51 -9.185 -0.010 -7.503 -3.718 1.901 -4.448 -2.814 D 109 107 3 110 3 0 0 31 49 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 40 - U - - MR 111 110 3 113 5 1 1 31 50 -7.881 -0.022 -7.697 -7.909 -8.801 -3.114 -2.853 -3.896 1.879 D 112 110 3 113 5 0 0 30 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 113 113 3 113 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 23 39 C G - - MP 114 113 3 118 6 2 2 30 49 -9.532 -9.471 -0.016 -8.248 -8.528 -8.923 -5.506 -5.598 -5.058 -1.777 0.479 -5.351 3.627 -4.484 -5.139 -1.663 -5.324 -3.687 -0.173 -5.495 -1.318 -3.958 ML 115 113 3 118 6 1 1 29 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 30 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 24 38 G C - - MP 120 119 6 124 6 2 2 28 47 -9.532 -9.471 -0.016 -8.248 -8.528 -8.923 -4.535 -2.520 -4.440 0.434 -5.409 -3.450 -0.558 -5.077 -4.530 3.537 -4.782 -0.081 -0.831 -3.202 -2.569 -3.417 ML 121 119 6 124 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 28 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 25 37 C G - - MP 126 125 6 130 6 2 2 26 45 -9.532 -9.471 -0.016 -8.248 -8.528 -8.923 -7.285 -7.363 -6.764 -3.964 -5.598 -4.991 3.955 -7.179 -7.344 -3.870 -4.060 -5.648 -3.021 -7.521 -4.344 -6.335 ML 127 125 6 130 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 25 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 26 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 26 36 U A - - MP 132 131 6 136 6 2 2 24 43 -9.532 -9.471 -0.016 -8.248 -8.528 -8.923 -6.580 -6.434 -6.140 -2.658 -4.710 -6.487 -0.397 -5.528 -6.129 -2.631 -6.400 -4.305 3.856 -6.584 -2.322 -4.491 ML 133 131 6 136 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 27 35 u a - - MP 138 137 6 142 6 2 2 22 41 -9.532 -9.471 -0.016 -8.248 -8.528 -8.923 -4.825 -4.791 -4.555 -0.882 -3.230 -5.009 2.701 -4.020 -4.559 -0.716 -4.880 -2.698 2.833 -4.891 -0.872 -3.368 ML 139 137 6 142 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 28 34 U A - - MP 144 143 6 148 4 2 2 20 39 -7.871 -8.078 -0.028 -6.493 -6.580 -6.434 -6.140 -2.658 -4.710 -6.487 -0.397 -5.528 -6.129 -2.631 -6.400 -4.305 3.856 -6.584 -2.322 -4.491 ML 145 143 6 148 4 1 1 22 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 147 143 6 148 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 148 148 5 148 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 149 149 6 149 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 29 - G - - - ML 150 149 6 152 3 1 1 17 35 -8.838 -0.011 -7.492 -3.230 -4.640 1.922 -3.972 D 151 149 6 152 3 0 0 17 35 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 30 - G - - - ML 153 152 3 155 3 1 1 16 34 -8.838 -0.011 -7.492 -3.230 -4.640 1.922 -3.972 D 154 152 3 155 3 0 0 16 34 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 31 - A - - - ML 156 155 3 158 3 1 1 14 33 -8.838 -0.011 -7.492 1.825 -3.267 -2.141 -2.983 D 157 155 3 158 3 0 0 15 33 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 32 - U - - - ML 159 158 3 161 3 1 1 12 31 -8.838 -0.011 -7.492 -3.114 -2.853 -3.896 1.879 D 160 158 3 161 3 0 0 13 32 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 33 - A - - - ML 162 161 3 164 2 1 1 1 1 * 0.000 1.919 -4.068 -3.557 -3.770 D 163 161 3 164 2 0 0 0 0 * 0.000 IL 164 164 3 164 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 165 164 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME UnaL2 ACC RF00436 DESC UnaL2 LINE 3' element LENG 54 MAXL 125 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:38:24 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 30 EFFN 6.339111 CKSUM 3902131467 STATS LOCAL MSV -7.5402 0.71929 STATS LOCAL VITERBI -7.9162 0.71929 STATS LOCAL FORWARD -4.2883 0.71929 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.23579 1.67999 1.46292 1.23285 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 0.00000 * 1 1.12396 2.28024 1.82680 0.88717 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 2 1.24239 2.22173 0.93614 1.55710 2 g - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 3 1.94008 0.84728 1.90567 1.27652 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 4 0.80622 2.33756 1.86930 1.19513 4 a - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 5 1.38102 0.99092 2.60282 1.19278 5 c - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 6 0.81139 2.19335 1.52104 1.48839 6 a - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 7 1.47403 0.55340 3.00158 1.92208 7 C - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 8 0.43409 1.74185 2.81249 2.14645 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 9 1.35575 1.72394 1.54811 1.04630 9 u - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 10 1.33016 2.42576 0.95156 1.34317 10 g - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 11 0.96890 2.02430 2.46006 0.90885 11 u - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 12 1.52386 1.21119 1.63611 1.23942 12 c - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 13 4.64837 3.31274 4.55533 0.05816 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 14 3.42476 4.40645 0.05917 4.36638 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.07466 2.78494 4.58485 0.80996 0.58856 1.09861 0.40547 15 3.87170 2.27378 3.77462 0.15863 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 16 0.07944 4.33841 3.03798 4.17468 18 A - - < 1.38629 1.38629 1.38629 1.38629 0.05971 3.04170 4.58485 0.38347 1.14412 1.09861 0.40547 17 0.20798 2.62548 3.15224 2.62255 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 18 3.04167 4.40151 0.08173 3.99198 21 G - - - 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 19 2.77378 3.04224 3.61922 0.14729 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 20 3.92913 0.12612 3.78089 2.57668 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 21 2.39470 3.07739 0.21023 2.95026 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 22 5.23220 0.02429 4.73824 4.61526 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 23 4.61571 3.30842 4.53538 0.05889 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 24 3.38622 0.86419 3.17824 0.68694 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 25 4.60375 3.30681 4.52801 0.05917 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 26 3.87244 4.87528 0.04176 4.38521 29 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 27 3.87244 4.87528 0.04176 4.38521 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 28 0.10206 3.86895 2.96648 3.70263 31 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 29 3.81987 3.60561 4.36608 0.06379 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 30 0.04208 4.48718 4.11893 4.29123 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 31 0.06797 4.72633 3.13123 4.32876 34 A - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 32 0.73839 3.34396 0.81262 3.14363 35 a - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 33 0.06759 4.73813 3.13352 4.33977 36 A - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 34 4.73804 5.10661 0.02044 5.21673 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 35 3.28130 0.25928 2.98081 1.96569 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 36 1.87876 3.93962 0.21944 3.69710 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 37 3.81987 3.60561 4.36608 0.06379 40 U - - - 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 38 4.24686 0.05183 4.70896 3.60501 41 C - - - 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 39 4.38871 3.45033 4.15388 0.06172 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 40 2.88607 3.97458 0.10662 3.62856 43 G - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 41 4.53683 0.07084 4.31737 3.11569 44 C - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 42 2.70528 2.53444 2.51409 0.25760 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 43 0.06625 4.78201 3.14184 4.38062 46 A - - > 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 44 0.04208 4.48718 4.11893 4.29123 47 A - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 45 0.04208 4.48718 4.11893 4.29123 48 A - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 46 3.81987 3.60561 4.36608 0.06379 49 U - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 47 2.44820 3.56103 0.18896 2.85903 50 G - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 48 1.29920 1.73471 0.83797 2.13529 51 g - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 49 2.87798 0.13346 4.01770 2.98195 52 C - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 50 0.96256 2.33665 2.24416 0.87846 53 u - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 51 2.32337 2.60236 1.46622 0.51557 54 U - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 52 0.64804 2.53343 2.63997 1.12031 55 A - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 53 0.92559 2.33266 2.20510 0.92527 56 u - - : 1.38629 1.38629 1.38629 1.38629 0.02062 4.58485 4.58485 1.46634 0.26236 1.09861 0.40547 54 0.73904 2.37276 2.10130 1.18121 57 a - - : 1.38629 1.38629 1.38629 1.38629 0.01036 4.57460 * 1.46634 0.26236 0.00000 * //