INFERNAL1/a [1.1.4 | Dec 2020] NAME snoU2-30 ACC RF00493 DESC Small nucleolar RNA U2-30 STATES 214 NODES 61 CLEN 70 W 87 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:42:27 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 21 EFFN 2.263550 CKSUM 3639084638 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 60.70 NC 57.40 EFP7GF -9.1229 0.71891 ECMLC 0.63848 -5.56182 3.53066 1600000 398482 0.003011 ECMGC 0.41640 -14.54973 -1.05251 1600000 110381 0.003624 ECMLI 0.62415 -3.65951 5.13242 1600000 289981 0.004138 ECMGI 0.42463 -10.08327 2.25006 1600000 75246 0.005316 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 87 107 -6.985 -8.230 -0.074 -4.684 IL 1 1 2 1 4 1 23 88 108 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 88 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 75 - A - - MR 3 2 3 5 5 1 25 87 107 -7.200 -0.036 -7.016 -7.228 -8.120 1.767 -2.619 -2.226 -2.186 D 4 2 3 5 5 0 19 85 106 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 23 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 74 G C - - MP 6 5 3 10 6 2 25 86 106 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -4.984 -3.210 -5.109 0.036 -5.573 -4.787 -0.877 -5.367 -4.482 3.691 -4.803 -0.919 -1.256 -4.625 -2.928 -3.982 ML 7 5 3 10 6 1 20 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 19 84 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 15 82 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 22 85 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 22 85 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 73 A U - - MP 12 11 6 16 6 2 23 84 104 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -3.582 -2.592 -3.674 3.122 -4.324 -5.108 -0.071 -3.833 -3.540 1.326 -4.106 0.947 -0.322 -4.180 -1.965 -2.503 ML 13 11 6 16 6 1 19 82 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 18 82 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 15 80 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 21 83 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 21 83 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 72 G C - - MP 18 17 6 22 6 2 21 82 102 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -4.596 -3.009 -4.668 0.347 -5.367 -4.705 -0.667 -5.027 -4.298 3.584 -4.645 -0.128 -0.965 -4.366 -2.694 -3.556 ML 19 17 6 22 6 1 18 81 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 17 80 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 14 79 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 19 81 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 19 81 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 71 C G - - MP 24 23 6 28 4 2 19 80 100 -7.079 -7.286 -0.103 -4.186 -4.177 -4.151 -3.932 -0.373 -2.690 -4.388 3.326 -3.471 -3.961 -0.162 -4.278 -2.151 0.897 -4.256 0.526 -2.806 ML 25 23 6 28 4 1 17 80 100 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 4 1 15 79 100 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 27 23 6 28 4 0 14 78 99 -4.568 -4.250 -2.265 -0.520 IL 28 28 5 28 4 1 19 81 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 29 29 6 29 3 1 18 80 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 5 - A - - - ML 30 29 6 32 3 1 18 77 97 -8.037 -0.020 -6.691 1.069 -1.151 -0.566 -0.364 D 31 29 6 32 3 0 13 76 96 -6.591 -1.048 -0.983 IL 32 32 3 32 3 1 17 79 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 6 - A - - - ML 33 32 3 35 3 1 17 76 96 -8.086 -0.019 -6.740 1.440 -1.138 -1.482 -1.075 D 34 32 3 35 3 0 12 75 95 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 16 78 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 7 - U - - - ML 36 35 3 38 3 1 16 75 95 -8.086 -0.019 -6.740 -1.714 -1.671 -2.459 1.678 D 37 35 3 38 3 0 11 74 94 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 16 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 8 - G - - - ML 39 38 3 41 3 1 15 74 94 -8.086 -0.019 -6.740 -1.839 -3.098 1.776 -2.486 D 40 38 3 41 3 0 10 73 93 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 15 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 9 - A - - - ML 42 41 3 44 3 1 15 73 93 -8.086 -0.019 -6.740 1.767 -2.619 -2.226 -2.186 D 43 41 3 44 3 0 9 72 92 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 14 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - U - - - ML 45 44 3 47 3 1 14 72 92 -8.086 -0.019 -6.740 -1.714 -1.671 -2.459 1.678 D 46 44 3 47 3 0 9 71 91 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 13 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 11 - G - - - ML 48 47 3 50 3 1 13 71 91 -8.086 -0.019 -6.740 -0.906 -1.780 1.365 -0.738 D 49 47 3 50 3 0 8 70 90 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 12 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 12 - A - - - ML 51 50 3 53 3 1 12 70 90 -8.469 -0.017 -6.787 1.244 -1.336 -0.778 -0.618 D 52 50 3 53 3 0 7 69 89 -5.620 -0.734 -1.403 IL 53 53 3 53 3 1 11 71 91 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 70 - A - - MR 54 53 3 56 3 1 11 69 89 -8.469 -0.017 -6.787 1.767 -2.619 -2.226 -2.186 D 55 53 3 56 3 0 6 67 87 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 10 70 90 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 69 - G - - MR 57 56 3 59 3 1 10 68 88 -8.469 -0.017 -6.787 -0.547 -2.161 1.463 -1.577 D 58 56 3 59 3 0 5 66 86 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 9 69 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 68 - U - - MR 60 59 3 62 3 1 10 67 87 -8.469 -0.017 -6.787 -1.714 -1.671 -2.459 1.678 D 61 59 3 62 3 0 4 65 85 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 9 68 88 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 67 - C - - MR 63 62 3 65 3 1 9 66 86 -8.469 -0.017 -6.787 -2.040 1.696 -2.871 -1.394 D 64 62 3 65 3 0 3 64 84 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 8 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 66 - c - - MR 66 65 3 68 3 1 8 65 85 -8.469 -0.017 -6.787 -0.853 0.781 -1.660 0.497 D 67 65 3 68 3 0 2 63 83 -6.390 -1.568 -0.620 IR 68 68 3 68 3 1 7 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 65 - A - - MR 69 68 3 71 3 1 8 64 84 -8.469 -0.017 -6.787 1.767 -2.619 -2.226 -2.186 D 70 68 3 71 3 0 2 62 82 -6.390 -1.568 -0.620 IR 71 71 3 71 3 1 6 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 64 - G - - MR 72 71 3 74 3 1 7 63 83 -8.469 -0.017 -6.787 -1.107 -2.566 1.638 -1.977 D 73 71 3 74 3 0 1 61 81 -6.390 -1.568 -0.620 IR 74 74 3 74 3 1 6 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 63 - U - - MR 75 74 3 77 3 1 6 62 82 -8.469 -0.017 -6.787 -1.714 -1.671 -2.459 1.678 D 76 74 3 77 3 0 0 60 80 -6.390 -1.568 -0.620 IR 77 77 3 77 3 1 5 63 83 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 62 - U - - MR 78 77 3 80 3 1 6 61 81 -8.469 -0.017 -6.787 -1.714 -1.671 -2.459 1.678 D 79 77 3 80 3 0 0 59 79 -6.390 -1.568 -0.620 IR 80 80 3 80 3 1 4 62 82 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 61 - C - - MR 81 80 3 83 3 1 5 60 80 -8.469 -0.017 -6.787 -2.040 1.696 -2.871 -1.394 D 82 80 3 83 3 0 0 58 78 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 4 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 60 - A - - MR 84 83 3 86 3 1 4 59 79 -8.469 -0.017 -6.787 1.767 -2.619 -2.226 -2.186 D 85 83 3 86 3 0 0 57 77 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 3 60 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 59 - C - - MR 87 86 3 89 3 1 4 58 78 -8.469 -0.017 -6.787 -2.040 1.696 -2.871 -1.394 D 88 86 3 89 3 0 0 56 76 -6.390 -1.568 -0.620 IR 89 89 3 89 3 1 2 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 58 - A - - MR 90 89 3 92 3 1 3 57 77 -8.469 -0.017 -6.787 1.767 -2.619 -2.226 -2.186 D 91 89 3 92 3 0 0 55 75 -6.390 -1.568 -0.620 IR 92 92 3 92 3 1 2 58 78 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 57 - U - - MR 93 92 3 95 3 1 3 56 76 -8.469 -0.017 -6.787 -1.714 -1.671 -2.459 1.678 D 94 92 3 95 3 0 0 54 74 -6.390 -1.568 -0.620 IR 95 95 3 95 3 1 1 57 77 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 56 - C - - MR 96 95 3 98 3 1 2 55 75 -8.469 -0.017 -6.787 -1.583 1.528 -2.418 -0.747 D 97 95 3 98 3 0 0 53 73 -6.390 -1.568 -0.620 IR 98 98 3 98 3 1 1 56 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 29 ] - 55 - U - - MR 99 98 3 101 3 1 2 54 74 -8.469 -0.017 -6.787 -1.301 -1.043 -2.039 1.519 D 100 98 3 101 3 0 0 52 72 -6.390 -1.568 -0.620 IR 101 101 3 101 3 1 1 55 75 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 54 - U - - MR 102 101 3 104 3 1 2 53 73 -8.469 -0.017 -6.787 -1.005 -1.157 -1.452 1.426 D 103 101 3 104 3 0 0 51 71 -6.390 -1.568 -0.620 IR 104 104 3 104 3 1 1 54 74 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 53 - U - - MR 105 104 3 107 3 1 1 52 72 -8.469 -0.017 -6.787 -1.120 -0.687 -1.862 1.402 D 106 104 3 107 3 0 0 50 70 -6.390 -1.568 -0.620 IR 107 107 3 107 3 1 1 53 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 52 - G - - MR 108 107 3 110 3 1 1 51 71 -8.469 -0.017 -6.787 -0.989 -1.896 1.428 -0.897 D 109 107 3 110 3 0 0 49 69 -6.390 -1.568 -0.620 IR 110 110 3 110 3 1 1 52 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 51 - G - - MR 111 110 3 113 3 1 1 50 70 -8.469 -0.017 -6.787 -0.667 -1.917 1.411 -1.167 D 112 110 3 113 3 0 0 48 68 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 1 51 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 34 ] - 50 - A - - MR 114 113 3 116 3 1 1 49 69 -8.469 -0.017 -6.787 1.267 -1.437 -0.621 -0.803 D 115 113 3 116 3 0 0 47 67 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 1 50 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 49 - A - - MR 117 116 3 119 3 1 1 48 68 -8.469 -0.017 -6.787 1.767 -2.619 -2.226 -2.186 D 118 116 3 119 3 0 0 46 66 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 1 49 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 48 - G - - MR 120 119 3 122 3 1 1 47 67 -8.469 -0.017 -6.787 -0.693 -2.264 1.517 -1.680 D 121 119 3 122 3 0 0 45 65 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 1 48 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 47 - U - - MR 123 122 3 125 3 1 1 46 66 -8.469 -0.017 -6.787 -1.714 -1.671 -2.459 1.678 D 124 122 3 125 3 0 0 44 64 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 1 47 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 46 - A - - MR 126 125 3 128 3 1 1 45 65 -8.469 -0.017 -6.787 1.054 -0.667 -0.686 -0.572 D 127 125 3 128 3 0 0 43 63 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 46 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 45 - U - - MR 129 128 3 131 3 1 1 44 64 -8.469 -0.017 -6.787 -1.714 -1.671 -2.459 1.678 D 130 128 3 131 3 0 0 42 62 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 45 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 44 - C - - MR 132 131 3 134 3 1 1 43 63 -8.469 -0.097 -4.012 -1.082 1.174 -1.913 0.008 D 133 131 3 134 3 0 0 41 61 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 44 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 43 - A - - MR 135 134 3 137 3 1 1 42 62 -8.390 -0.018 -6.708 1.544 -1.774 -1.625 -1.099 D 136 134 3 137 3 0 0 40 60 -6.953 -2.131 -0.389 IR 137 137 3 137 3 1 1 43 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 42 - A - - MR 138 137 3 140 3 1 1 41 61 -8.390 -0.018 -6.708 1.399 -1.084 -1.391 -0.974 D 139 137 3 140 3 0 0 39 59 -6.953 -2.131 -0.389 IR 140 140 3 140 3 1 1 42 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 41 - U - - MR 141 140 3 143 3 1 1 40 60 -8.390 -0.055 -4.863 -0.720 -0.652 -1.230 1.221 D 142 140 3 143 3 0 0 38 58 -6.953 -2.131 -0.389 IR 143 143 3 143 3 1 1 41 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 40 - a - - MR 144 143 3 146 5 1 1 39 59 -4.681 -0.087 -6.908 -7.121 -8.012 0.703 -1.396 0.507 -0.808 D 145 143 3 146 5 0 0 38 58 -5.823 -0.473 -3.450 -4.881 -2.875 IR 146 146 3 146 5 1 1 39 59 -2.531 -0.449 -6.042 -4.210 -5.316 0.000 0.000 0.000 0.000 [ MATP 45 ] 13 38 A U - - MP 147 146 3 151 6 2 2 38 58 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -3.447 -2.738 -3.498 3.162 -3.842 -4.654 0.238 -3.697 -3.515 1.231 -4.054 0.057 -0.033 -3.843 -1.612 -1.168 ML 148 146 3 151 6 1 1 36 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 3 151 6 1 1 36 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 150 146 3 151 6 0 0 34 54 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 38 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 37 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 14 37 A U - - MP 153 152 6 157 6 2 2 36 56 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -3.583 -1.147 -3.633 3.270 -4.142 -4.904 -0.034 -3.824 -3.606 1.230 -4.154 -0.321 -0.292 -4.056 -1.880 -2.560 ML 154 152 6 157 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 32 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 36 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 35 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 15 36 A U - - MP 159 158 6 163 6 2 2 34 54 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -3.839 -3.048 -3.823 3.395 -4.154 -5.101 0.028 -3.935 -3.847 0.866 -4.386 -0.626 -0.323 -4.302 -1.871 -1.555 ML 160 158 6 163 6 1 1 32 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 32 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 30 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 34 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 33 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 16 35 g c - - MP 165 164 6 169 6 2 2 32 52 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -2.493 -1.142 -2.598 1.195 -2.821 -3.322 0.880 -3.012 -1.949 2.658 -3.194 0.190 0.680 -1.312 -0.777 -1.746 ML 166 164 6 169 6 1 1 30 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 30 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 28 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 32 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 31 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 17 34 g c - - MP 171 170 6 175 6 2 2 30 50 -5.758 -9.098 -0.045 -7.875 -8.154 -8.549 -2.212 -0.512 -2.385 1.265 -2.529 -3.056 1.030 -2.744 -1.351 2.348 -2.879 0.400 0.833 -1.907 -0.569 -1.541 ML 172 170 6 175 6 1 1 28 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 28 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 26 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 29 49 -2.806 -3.069 -0.622 -4.724 -5.500 -5.161 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 29 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 19 33 U A - - MP 177 176 6 181 6 2 2 28 48 -9.159 -9.098 -0.020 -7.875 -8.154 -8.549 -4.482 -4.314 -4.288 -0.589 -3.169 -4.824 1.164 -3.885 -4.290 -0.374 -4.648 -2.203 3.451 -4.622 -0.838 -3.083 ML 178 176 6 181 6 1 1 27 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 27 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 25 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 28 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 27 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 20 32 U G - - MP 183 182 6 187 4 2 2 26 46 -7.079 -7.286 -0.092 -4.380 -4.346 -4.276 -3.989 -0.586 -2.671 -4.372 1.621 -3.467 -4.032 -0.436 -4.298 -2.269 0.738 -4.406 3.152 -2.891 ML 184 182 6 187 4 1 1 26 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 4 1 1 26 46 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 186 182 6 187 4 0 0 25 45 -4.568 -4.250 -2.265 -0.520 IL 187 187 5 187 4 1 1 27 48 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 188 188 6 188 3 1 1 27 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 21 - U - - - ML 189 188 6 191 3 1 1 23 43 -5.085 -0.058 -6.701 -1.640 -1.609 -2.381 1.660 D 190 188 6 191 3 0 0 22 42 -6.520 -1.128 -0.911 IL 191 191 3 191 3 1 1 25 45 -1.530 -0.736 -4.230 0.000 0.000 0.000 0.000 [ MATL 53 ] 23 - U - - - ML 192 191 3 194 3 1 1 22 42 -8.086 -0.019 -6.740 -0.403 -0.718 -1.202 1.138 D 193 191 3 194 3 0 0 21 41 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 24 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 24 - A - - - ML 195 194 3 197 3 1 1 21 41 -8.086 -0.019 -6.740 1.399 -1.292 -1.106 -1.031 D 196 194 3 197 3 0 0 20 40 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 23 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 25 - c - - - ML 198 197 3 200 3 1 1 20 40 -8.086 -0.019 -6.740 -0.650 0.894 -1.070 0.040 D 199 197 3 200 3 0 0 19 39 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 22 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 26 - U - - - ML 201 200 3 203 3 1 1 19 39 -8.086 -0.019 -6.740 -0.376 -0.919 -0.783 1.084 D 202 200 3 203 3 0 0 17 37 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 21 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 27 - A - - - ML 204 203 3 206 3 1 1 18 38 -4.059 -0.104 -6.740 1.640 -2.160 -1.494 -1.712 D 205 203 3 206 3 0 0 15 35 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 20 40 -1.332 -0.840 -4.503 0.000 0.000 0.000 0.000 [ MATL 58 ] 30 - C - - - ML 207 206 3 209 3 1 1 13 31 -8.086 -0.019 -6.740 -1.514 1.493 -2.350 -0.648 D 208 206 3 209 3 0 0 13 32 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 31 - U - - - ML 210 209 3 212 2 1 1 1 1 * 0.000 -0.678 -1.025 -1.191 1.290 D 211 209 3 212 2 0 0 0 0 * 0.000 IL 212 212 3 212 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 60 ] - - - - - - E 213 212 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME snoU2-30 ACC RF00493 DESC Small nucleolar RNA U2-30 LENG 70 MAXL 153 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:42:28 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 21 EFFN 2.735229 CKSUM 3639084638 STATS LOCAL MSV -8.4656 0.71891 STATS LOCAL VITERBI -9.1046 0.71891 STATS LOCAL FORWARD -3.1377 0.71891 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.24264 1.63192 1.56684 1.18051 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 0.00000 * 1 2.69545 3.41339 0.14572 3.34785 1 G - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 2 0.49726 2.88748 1.31312 2.70149 2 A - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 3 2.46953 3.24434 0.18333 3.12605 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 4 2.91978 0.40121 2.69941 1.56398 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.07533 4.03023 2.90423 1.46634 0.26236 1.09861 0.40547 5 0.61447 2.24433 1.79835 1.67397 5 A - - - 1.38629 1.38629 1.38629 1.38629 0.03761 3.99250 3.99250 1.46634 0.26236 0.49996 0.93281 6 0.34618 2.22420 2.52972 2.25588 6 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 7 2.78164 2.71671 3.30540 0.17998 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 8 2.88465 3.78646 0.12020 3.36077 8 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 9 0.12742 3.42088 3.12749 3.14365 9 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 10 2.78164 2.71671 3.30540 0.17998 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 11 2.13919 2.75552 0.38649 1.97159 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 12 0.48887 2.38725 1.96047 1.87076 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 13 0.45062 2.66980 1.63745 2.31241 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 14 0.35521 2.86928 1.74367 2.69774 14 A - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 15 0.29824 2.89796 2.04676 2.60930 15 A - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 16 1.65534 2.04756 0.67937 1.75454 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 17 1.50692 1.91234 0.80513 1.69474 17 g - - < 1.38629 1.38629 1.38629 1.38629 0.08185 2.79986 4.03023 0.50785 0.92078 1.09861 0.40547 18 3.16862 2.06159 2.94771 0.25074 19 U - - < 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 19 3.09382 1.66744 2.91134 0.34033 20 U - - < 1.38629 1.38629 1.38629 1.38629 0.06765 4.03023 3.04400 1.46634 0.26236 1.09861 0.40547 20 2.72475 2.66933 3.24655 0.19088 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06746 3.05932 3.99990 0.65508 0.73272 0.55730 0.85039 21 1.71446 1.93365 2.28140 0.55656 23 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 22 0.37794 2.34117 2.21901 2.20909 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 23 1.92110 0.71235 2.17680 1.38766 25 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 24 1.69601 2.09302 1.95669 0.59431 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 25 0.21292 3.04281 2.52037 2.75442 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.10324 2.52174 4.03023 0.85007 0.55754 1.09861 0.40547 26 2.62380 0.29649 3.21217 1.93949 30 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 27 1.94370 2.18843 2.28108 0.44229 31 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 28 2.22662 3.09100 0.23827 2.83593 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 29 0.28397 3.13523 1.89842 2.92032 33 A - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 30 1.85538 0.91797 1.71054 1.33367 34 c - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 31 2.03639 0.74504 1.84711 1.43930 35 c - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 32 3.02074 2.31084 2.71298 0.24116 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 33 2.91738 1.85459 2.67514 0.32780 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 34 2.74417 1.97936 2.48361 0.33673 38 U - - > 1.38629 1.38629 1.38629 1.38629 0.17776 2.90423 2.22500 0.55696 0.85085 1.09861 0.40547 35 0.87799 2.44560 0.99993 2.04172 40 a - - - 1.38629 1.38629 1.38629 1.38629 0.03985 3.93559 3.93559 1.46634 0.26236 1.14898 0.38120 36 1.97837 1.88626 2.30813 0.49328 41 U - - - 1.38629 1.38629 1.38629 1.38629 0.03865 3.96564 3.96564 1.46634 0.26236 1.87486 0.16650 37 0.37341 2.18546 2.45724 2.17580 42 A - - - 1.38629 1.38629 1.38629 1.38629 0.03865 3.96564 3.96564 1.46634 0.26236 1.87486 0.16650 38 0.27538 2.73912 2.64149 2.25540 43 A - - - 1.38629 1.38629 1.38629 1.38629 0.03865 3.96564 3.96564 1.46634 0.26236 0.36637 1.18171 39 2.26673 0.51722 2.85693 1.41580 44 C - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 40 2.78164 2.71671 3.30540 0.17998 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 41 0.62070 1.86341 1.89309 1.85353 46 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 42 2.78164 2.71671 3.30540 0.17998 47 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 43 1.95125 3.11717 0.29051 2.72210 48 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 44 0.12742 3.42088 3.12749 3.14365 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 45 0.47279 2.46681 1.83840 2.01881 50 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 46 1.92965 2.83562 0.36289 2.29805 51 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 47 2.20522 2.84546 0.34469 2.09374 52 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 48 2.29389 1.91098 2.81175 0.36948 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 49 2.21416 2.29905 2.48904 0.34614 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 50 2.43685 2.19360 2.95189 0.28927 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 51 2.68110 0.27340 3.26763 2.02018 56 C - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 52 2.78164 2.71671 3.30540 0.17998 57 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 53 0.12742 3.42088 3.12749 3.14365 58 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 54 3.06629 0.16203 3.64142 2.56691 59 C - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 55 0.12742 3.42088 3.12749 3.14365 60 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 56 3.06629 0.16203 3.64142 2.56691 61 C - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 57 2.78164 2.71671 3.30540 0.17998 62 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 58 2.78164 2.71671 3.30540 0.17998 63 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 59 2.28005 3.35560 0.20980 2.95485 64 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 60 0.12742 3.42088 3.12749 3.14365 65 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 61 2.07811 0.79659 2.65133 1.04013 66 c - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 62 3.06629 0.16203 3.64142 2.56691 67 C - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 63 2.78164 2.71671 3.30540 0.17998 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 64 1.83622 3.03659 0.32659 2.64221 69 G - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 65 0.12742 3.42088 3.12749 3.14365 70 A - - - 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 66 2.09626 2.86146 0.28579 2.68125 71 G - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 67 3.34084 0.24313 3.07422 2.00843 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 68 2.92014 1.90556 2.68890 0.31556 73 U - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 69 3.56889 0.17066 3.26782 2.40110 74 C - - > 1.38629 1.38629 1.38629 1.38629 0.03619 4.03023 4.03023 1.46634 0.26236 1.09861 0.40547 70 0.12742 3.42088 3.12749 3.14365 75 A - - : 1.38629 1.38629 1.38629 1.38629 0.01826 4.01230 * 1.46634 0.26236 0.00000 * //