INFERNAL1/a [1.1.4 | Dec 2020] NAME snoCD11 ACC RF00538 DESC Small nucleolar RNA CD11 STATES 229 NODES 71 CLEN 75 W 93 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:45:11 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 26 EFFN 2.605713 CKSUM 3973081462 NULL 0.000 0.000 0.000 0.000 GA 60.00 TC 67.60 NC 38.10 EFP7GF -8.8225 0.71873 ECMLC 0.61818 -5.47835 3.30822 1600000 274237 0.004376 ECMGC 0.41052 -16.17103 -3.18285 1600000 82735 0.004835 ECMLI 0.60908 -2.94118 5.31877 1600000 183695 0.006533 ECMGI 0.41491 -11.80653 0.14241 1600000 56905 0.007029 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 93 114 -7.099 -8.344 -0.095 -4.227 IL 1 1 2 1 4 1 33 95 115 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 34 95 115 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 85 - u - - MR 3 2 3 5 3 3 34 93 114 -8.553 -0.016 -6.871 0.148 -0.450 -0.957 0.718 D 4 2 3 5 3 0 29 91 112 -6.606 -1.784 -0.516 IR 5 5 3 5 3 1 33 94 114 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 84 - u - - MR 6 5 3 8 3 2 33 92 113 -8.553 -0.016 -6.871 0.164 -0.190 -1.138 0.631 D 7 5 3 8 3 0 28 91 111 -6.606 -1.784 -0.516 IR 8 8 3 8 3 1 33 93 113 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 83 - a - - MR 9 8 3 11 3 2 33 91 112 -8.553 -0.016 -6.871 0.384 -0.275 -0.549 0.246 D 10 8 3 11 3 0 27 90 110 -6.606 -1.219 -0.836 IR 11 11 3 11 3 1 32 92 112 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 82 - a - - MR 12 11 3 14 5 2 32 90 111 -7.302 -0.061 -5.287 -7.330 -8.221 0.235 0.126 -0.812 0.217 D 13 11 3 14 5 0 26 89 109 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 30 91 111 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 1 81 u a - - MP 15 14 3 19 6 3 31 89 110 -9.196 -9.135 -0.020 -7.912 -8.192 -8.587 -1.726 -2.179 -2.279 1.443 -2.111 -3.116 1.659 -2.514 -2.331 1.212 -2.884 -0.320 1.888 -2.412 0.014 -0.938 ML 16 14 3 19 6 1 28 88 108 -6.430 -6.777 -1.079 -1.185 -6.626 -4.156 0.699 -0.612 -0.320 -0.118 MR 17 14 3 19 6 1 27 88 108 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 23 86 106 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 29 89 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 29 89 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 2 80 u a - - MP 21 20 6 25 6 2 29 87 108 -9.210 -9.149 -0.020 -7.925 -8.205 -8.600 -1.290 -1.508 -1.896 1.346 -1.875 -2.726 1.447 -1.847 -1.959 1.384 -2.515 -0.051 1.591 -2.025 -0.074 -0.352 ML 22 20 6 25 6 1 27 86 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 25 86 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 23 84 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 28 87 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 28 87 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 3 79 u a - - MP 27 26 6 31 4 2 27 85 106 -7.201 -7.408 -0.085 -4.493 -1.774 -1.924 -1.959 1.389 -1.887 -2.803 1.509 -2.264 -1.349 1.089 -2.584 -0.277 1.833 -1.678 0.250 -0.932 ML 28 26 6 31 4 1 26 85 106 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 24 85 106 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 22 84 104 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 27 87 107 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 26 86 106 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 4 - a - - - ML 33 32 6 35 3 1 26 83 103 -8.164 -0.018 -6.818 0.482 -0.349 -0.878 0.349 D 34 32 6 35 3 0 22 81 102 -6.523 -2.036 -0.424 IL 35 35 3 35 3 1 26 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 5 - u - - - ML 36 35 3 38 3 1 25 82 102 -8.164 -0.018 -6.818 0.208 -0.565 -0.151 0.343 D 37 35 3 38 3 0 21 81 101 -6.523 -1.125 -0.915 IL 38 38 3 38 3 1 25 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 6 - u - - - ML 39 38 3 41 3 1 24 81 101 -8.201 -0.017 -6.855 0.203 -0.371 -0.976 0.648 D 40 38 3 41 3 0 20 79 100 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 24 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 7 - u - - - ML 42 41 3 44 3 1 23 80 100 -8.201 -0.017 -6.855 -0.134 0.351 -1.277 0.486 D 43 41 3 44 3 0 20 78 99 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 23 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 8 - u - - - ML 45 44 3 47 3 1 22 79 99 -8.201 -0.017 -6.855 0.132 -0.273 -0.987 0.653 D 46 44 3 47 3 0 19 77 98 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 22 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 9 - u - - - ML 48 47 3 50 3 1 21 78 98 -8.201 -0.314 -2.380 0.302 -0.236 -0.677 0.370 D 49 47 3 50 3 0 18 76 97 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 22 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 10 - a - - - ML 51 50 3 53 3 1 22 77 97 -4.594 -0.077 -6.563 0.463 0.051 -0.992 0.114 D 52 50 3 53 3 0 18 75 94 -7.759 -3.272 -0.165 IL 53 53 3 53 3 1 22 79 99 -1.370 -0.825 -4.364 0.000 0.000 0.000 0.000 [ MATL 15 ] 13 - a - - - ML 54 53 3 56 3 1 21 75 95 -7.909 -0.021 -6.563 0.849 -0.772 -0.188 -0.445 D 55 53 3 56 3 0 17 74 94 -7.759 -0.377 -2.151 IL 56 56 3 56 3 1 20 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 14 - U - - - ML 57 56 3 59 3 1 20 74 94 -8.201 -0.017 -6.855 -0.736 -1.236 -1.801 1.427 D 58 56 3 59 3 0 15 73 93 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 19 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - G - - - ML 60 59 3 62 3 1 19 73 93 -8.201 -0.017 -6.855 -0.526 -1.260 1.273 -1.085 D 61 59 3 62 3 0 14 72 92 -6.174 -1.687 -0.566 IL 62 62 3 62 3 1 19 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 16 - A - - - ML 63 62 3 65 3 1 19 72 92 -8.201 -0.017 -6.855 1.599 -1.613 -1.788 -1.500 D 64 62 3 65 3 0 13 71 91 -6.174 -1.687 -0.566 IL 65 65 3 65 3 1 18 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 17 - U - - - ML 66 65 3 68 3 1 18 71 91 -8.201 -0.017 -6.855 -0.835 -1.120 -0.877 1.284 D 67 65 3 68 3 0 13 70 89 -6.174 -1.687 -0.566 IL 68 68 3 68 3 1 17 73 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 18 - G - - - ML 69 68 3 71 3 1 17 70 90 -8.201 -0.017 -6.855 -2.078 -3.369 1.815 -2.755 D 70 68 3 71 3 0 12 69 88 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 16 72 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 19 - A - - - ML 72 71 3 74 3 1 16 69 89 -8.201 -0.017 -6.855 1.626 -2.030 -1.887 -1.331 D 73 71 3 74 3 0 11 68 87 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 15 71 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 20 - a - - - ML 75 74 3 77 3 1 15 68 87 -8.201 -0.017 -6.855 0.818 -1.020 -1.178 0.381 D 76 74 3 77 3 0 10 67 86 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 15 70 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 21 - U - - - ML 78 77 3 80 3 1 15 67 86 -8.201 -0.017 -6.855 -1.231 -0.679 -1.978 1.431 D 79 77 3 80 3 0 10 66 85 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 14 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 22 - G - - - ML 81 80 3 83 3 1 14 66 85 -8.201 -0.017 -6.855 -1.464 -2.508 1.647 -1.600 D 82 80 3 83 3 0 9 65 84 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 13 68 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 23 - A - - - ML 84 83 3 86 3 1 13 65 84 -4.986 -0.059 -6.855 1.804 -2.852 -2.437 -2.443 D 85 83 3 86 3 0 8 63 82 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 12 66 86 -1.549 -0.724 -4.249 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - U - - - ML 87 86 3 89 3 1 12 64 83 -8.201 -0.017 -6.855 -0.557 -1.174 -1.694 1.361 D 88 86 3 89 3 0 8 62 82 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 11 66 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - U - - - ML 90 89 3 92 3 1 11 63 82 -5.024 -0.058 -6.855 -0.709 -0.854 -0.804 1.178 D 91 89 3 92 3 0 7 61 80 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 11 64 83 -1.546 -0.725 -4.246 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - u - - - ML 93 92 3 95 3 1 10 61 80 -5.133 -0.055 -6.855 -0.481 -0.763 -0.199 0.866 D 94 92 3 95 3 0 6 60 79 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 10 63 82 -1.538 -0.731 -4.238 0.000 0.000 0.000 0.000 [ MATL 29 ] 30 - a - - - ML 96 95 3 98 3 1 9 60 79 -8.201 -0.017 -6.855 0.985 -0.897 -0.579 -0.297 D 97 95 3 98 3 0 5 59 78 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 9 62 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 31 - G - - - ML 99 98 3 101 3 1 8 59 78 -4.063 -0.102 -6.855 -0.605 -2.311 1.506 -1.738 D 100 98 3 101 3 0 5 57 76 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 8 60 79 -1.649 -0.662 -4.349 0.000 0.000 0.000 0.000 [ MATL 31 ] 33 - C - - - ML 102 101 3 104 3 1 7 58 76 -8.201 -0.017 -6.855 -2.323 1.750 -3.154 -1.622 D 103 101 3 104 3 0 4 56 75 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 7 60 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 34 - a - - - ML 105 104 3 107 3 1 6 56 75 -8.577 -0.175 -3.160 0.996 -1.336 -0.055 -0.626 D 106 104 3 107 3 0 3 55 74 -5.620 -0.734 -1.403 IL 107 107 3 107 3 1 7 57 76 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 78 - a - - MR 108 107 3 110 3 1 7 56 74 -1.869 -0.480 -6.737 0.606 -0.202 -1.020 0.157 D 109 107 3 110 3 0 2 53 71 -7.394 -0.579 -1.624 IR 110 110 3 110 3 1 7 56 74 -1.566 -0.644 -5.491 0.000 0.000 0.000 0.000 [ MATR 34 ] - 74 - A - - MR 111 110 3 113 3 1 6 53 71 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 112 110 3 113 3 0 0 51 70 -6.390 -1.568 -0.620 IR 113 113 3 113 3 1 5 54 72 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 73 - G - - MR 114 113 3 116 3 1 5 52 70 -8.577 -0.016 -6.895 -2.078 -3.369 1.815 -2.755 D 115 113 3 116 3 0 0 50 69 -6.390 -1.568 -0.620 IR 116 116 3 116 3 1 4 53 71 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 72 - U - - MR 117 116 3 119 3 1 5 51 69 -8.577 -0.016 -6.895 -1.934 -1.853 -2.687 1.725 D 118 116 3 119 3 0 0 49 68 -6.390 -1.568 -0.620 IR 119 119 3 119 3 1 3 52 70 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 71 - C - - MR 120 119 3 122 3 1 4 50 68 -8.577 -0.016 -6.895 -2.323 1.750 -3.154 -1.622 D 121 119 3 122 3 0 0 48 67 -6.390 -1.568 -0.620 IR 122 122 3 122 3 1 2 51 69 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 70 - a - - MR 123 122 3 125 3 1 4 49 67 -8.577 -0.016 -6.895 0.845 -0.618 -0.369 -0.363 D 124 122 3 125 3 0 0 47 66 -6.390 -1.568 -0.620 IR 125 125 3 125 3 1 2 50 68 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 69 - g - - MR 126 125 3 128 3 1 3 48 66 -8.577 -0.016 -6.895 -0.053 -1.093 0.603 0.068 D 127 125 3 128 3 0 0 46 65 -6.390 -1.568 -0.620 IR 128 128 3 128 3 1 1 49 67 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 68 - A - - MR 129 128 3 131 3 1 3 47 65 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 130 128 3 131 3 0 0 45 64 -6.390 -1.568 -0.620 IR 131 131 3 131 3 1 1 48 66 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 67 - A - - MR 132 131 3 134 3 1 2 46 64 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 133 131 3 134 3 0 0 44 63 -6.390 -1.568 -0.620 IR 134 134 3 134 3 1 1 47 65 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 66 - C - - MR 135 134 3 137 3 1 2 45 63 -8.577 -0.016 -6.895 -2.323 1.750 -3.154 -1.622 D 136 134 3 137 3 0 0 43 62 -6.390 -1.568 -0.620 IR 137 137 3 137 3 1 1 45 64 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 65 - C - - MR 138 137 3 140 3 1 2 44 62 -8.577 -0.016 -6.895 -2.323 1.750 -3.154 -1.622 D 139 137 3 140 3 0 0 42 61 -6.390 -1.568 -0.620 IR 140 140 3 140 3 1 1 44 63 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 64 - C - - MR 141 140 3 143 3 1 1 43 61 -8.577 -0.016 -6.895 -2.323 1.750 -3.154 -1.622 D 142 140 3 143 3 0 0 41 60 -6.390 -1.568 -0.620 IR 143 143 3 143 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 45 ] - 63 - A - - MR 144 143 3 146 3 1 1 42 60 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 145 143 3 146 3 0 0 40 59 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 62 - C - - MR 147 146 3 149 3 1 1 41 59 -8.577 -0.016 -6.895 -1.420 1.497 -1.786 -0.960 D 148 146 3 149 3 0 0 39 58 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 47 ] - 61 - U - - MR 150 149 3 152 3 1 1 40 58 -8.577 -0.016 -6.895 -1.934 -1.853 -2.687 1.725 D 151 149 3 152 3 0 0 38 57 -6.390 -1.568 -0.620 IR 152 152 3 152 3 1 1 40 59 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 48 ] - 60 - A - - MR 153 152 3 155 3 1 1 39 57 -8.577 -0.016 -6.895 1.627 -2.183 -1.346 -1.744 D 154 152 3 155 3 0 0 37 56 -6.390 -1.568 -0.620 IR 155 155 3 155 3 1 1 39 58 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 49 ] - 59 - C - - MR 156 155 3 158 3 1 1 38 56 -8.577 -0.016 -6.895 -2.323 1.750 -3.154 -1.622 D 157 155 3 158 3 0 0 36 55 -6.390 -1.568 -0.620 IR 158 158 3 158 3 1 1 38 57 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 58 - U - - MR 159 158 3 161 3 1 1 37 55 -8.577 -0.016 -6.895 -1.934 -1.853 -2.687 1.725 D 160 158 3 161 3 0 0 35 54 -6.390 -1.568 -0.620 IR 161 161 3 161 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 57 - U - - MR 162 161 3 164 3 1 1 36 54 -8.577 -0.016 -6.895 -1.934 -1.853 -2.687 1.725 D 163 161 3 164 3 0 0 34 53 -6.390 -1.568 -0.620 IR 164 164 3 164 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 52 ] - 56 - A - - MR 165 164 3 167 3 1 1 35 53 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 166 164 3 167 3 0 0 33 52 -6.390 -1.568 -0.620 IR 167 167 3 167 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 53 ] - 55 - U - - MR 168 167 3 170 3 1 1 34 52 -8.577 -0.016 -6.895 -1.039 -1.353 -1.988 1.521 D 169 167 3 170 3 0 0 32 51 -6.390 -1.568 -0.620 IR 170 170 3 170 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 54 ] - 54 - A - - MR 171 170 3 173 3 1 1 33 51 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 172 170 3 173 3 0 0 31 50 -6.390 -1.568 -0.620 IR 173 173 3 173 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 55 ] - 53 - U - - MR 174 173 3 176 3 1 1 32 50 -8.577 -0.016 -6.895 -0.804 -0.950 -1.743 1.385 D 175 173 3 176 3 0 0 30 49 -6.390 -1.568 -0.620 IR 176 176 3 176 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 56 ] - 52 - C - - MR 177 176 3 179 3 1 1 30 49 -8.577 -0.016 -6.895 -2.323 1.750 -3.154 -1.622 D 178 176 3 179 3 0 0 29 48 -6.390 -1.568 -0.620 IR 179 179 3 179 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 57 ] - 51 - A - - MR 180 179 3 182 3 1 1 29 48 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 181 179 3 182 3 0 0 28 47 -6.390 -1.568 -0.620 IR 182 182 3 182 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 58 ] - 50 - G - - MR 183 182 3 185 3 1 1 28 47 -8.577 -0.016 -6.895 -2.078 -3.369 1.815 -2.755 D 184 182 3 185 3 0 0 27 46 -6.390 -1.568 -0.620 IR 185 185 3 185 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 59 ] - 49 - A - - MR 186 185 3 188 3 1 1 27 46 -8.577 -0.016 -6.895 1.653 -2.119 -1.949 -1.455 D 187 185 3 188 3 0 0 26 44 -6.390 -1.568 -0.620 IR 188 188 3 188 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 60 ] - 48 - A - - MR 189 188 3 191 3 1 1 26 45 -8.577 -0.016 -6.895 1.804 -2.852 -2.437 -2.443 D 190 188 3 191 3 0 0 25 43 -6.390 -1.568 -0.620 IR 191 191 3 191 3 1 1 27 46 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 61 ] - 47 - G - - MR 192 191 3 194 3 1 1 25 44 -8.577 -0.016 -6.895 -1.147 -2.699 1.662 -2.120 D 193 191 3 194 3 0 0 24 42 -6.390 -1.568 -0.620 IR 194 194 3 194 3 1 1 26 45 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 62 ] - 46 - U - - MR 195 194 3 197 3 1 1 24 43 -8.577 -0.016 -6.895 -1.934 -1.853 -2.687 1.725 D 196 194 3 197 3 0 0 23 42 -6.390 -1.568 -0.620 IR 197 197 3 197 3 1 1 25 44 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 63 ] - 45 - U - - MR 198 197 3 200 5 1 1 23 42 -3.898 -0.126 -7.118 -7.330 -8.221 -1.934 -1.853 -2.687 1.725 D 199 197 3 200 5 0 0 22 41 -5.352 -0.707 -2.978 -4.409 -2.404 IR 200 200 3 200 5 1 1 24 42 -2.668 -0.402 -6.179 -4.347 -5.453 0.000 0.000 0.000 0.000 [ MATP 64 ] 35 43 G C - - MP 201 200 3 205 6 2 2 22 41 -9.210 -9.149 -0.020 -7.925 -8.205 -8.600 -5.206 -3.319 -5.364 -0.119 -5.884 -4.870 -1.132 -5.629 -4.618 3.732 -4.924 -1.040 -1.506 -4.768 -3.197 -4.234 ML 202 200 3 205 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 3 205 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 3 205 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 22 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 65 ] 36 42 A U - - MP 207 206 6 211 6 2 2 20 39 -9.210 -9.149 -0.020 -7.925 -8.205 -8.600 -4.236 -3.162 -4.213 3.557 -4.786 -5.900 -0.455 -4.225 -4.096 0.597 -4.665 -0.572 -0.870 -5.006 -2.394 -3.027 ML 208 206 6 211 6 1 1 20 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 20 38 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 18 37 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 20 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 66 ] 37 41 A U - - MP 213 212 6 217 4 2 2 18 37 -7.201 -7.408 -0.044 -5.823 -4.236 -3.162 -4.213 3.557 -4.786 -5.900 -0.455 -4.225 -4.096 0.597 -4.665 -0.572 -0.870 -5.006 -2.394 -3.027 ML 214 212 6 217 4 1 1 19 38 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 4 1 1 19 38 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 216 212 6 217 4 0 0 18 37 -4.568 -4.250 -2.265 -0.520 IL 217 217 5 217 4 1 1 21 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 218 218 6 218 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 38 - G - - - ML 219 218 6 221 3 1 1 15 33 -8.201 -0.017 -6.855 -2.078 -3.369 1.815 -2.755 D 220 218 6 221 3 0 0 15 33 -6.174 -1.687 -0.566 IL 221 221 3 221 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 68 ] 39 - A - - - ML 222 221 3 224 3 1 1 13 31 -8.201 -0.017 -6.855 1.804 -2.852 -2.437 -2.443 D 223 221 3 224 3 0 0 13 32 -6.174 -1.687 -0.566 IL 224 224 3 224 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 69 ] 40 - G - - - ML 225 224 3 227 2 1 1 1 1 * 0.000 -2.078 -3.369 1.815 -2.755 D 226 224 3 227 2 0 0 0 0 * 0.000 IL 227 227 3 227 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 70 ] - - - - - - E 228 227 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME snoCD11 ACC RF00538 DESC Small nucleolar RNA CD11 LENG 75 MAXL 158 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:45:11 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 26 EFFN 2.929443 CKSUM 3973081462 STATS LOCAL MSV -8.6509 0.71873 STATS LOCAL VITERBI -9.1414 0.71873 STATS LOCAL FORWARD -4.0650 0.71873 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.15303 1.60615 1.58277 1.27921 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 0.00000 * 1 1.49556 1.49001 1.56211 1.07642 1 u - - < 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 2 1.48560 1.55054 1.39916 1.15614 2 u - - < 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 3 1.52577 1.54703 1.53185 1.03979 3 u - - < 1.38629 1.38629 1.38629 1.38629 0.06238 4.10157 3.12512 1.46634 0.26236 1.09861 0.40547 4 1.04363 1.63068 2.01311 1.14427 4 a - - - 1.38629 1.38629 1.38629 1.38629 0.03462 4.07380 4.07380 1.46634 0.26236 1.53794 0.24185 5 1.24291 1.78851 1.48361 1.14750 5 u - - - 1.38629 1.38629 1.38629 1.38629 0.03462 4.07380 4.07380 1.46634 0.26236 0.56150 0.84480 6 1.24342 1.64844 2.08292 0.92966 6 u - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 7 1.49299 1.12158 2.31190 1.04850 7 u - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 8 1.29535 1.57654 2.09099 0.92649 8 u - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 9 1.17372 1.54832 1.86413 1.12964 9 u - - - 1.38629 1.38629 1.38629 1.38629 0.26563 4.10157 1.52911 1.46634 0.26236 1.09861 0.40547 10 1.05744 1.33727 2.10184 1.31728 10 a - - - 1.38629 1.38629 1.38629 1.38629 0.08649 2.77789 3.87820 0.93114 0.50105 2.71456 0.06853 11 0.78193 1.93567 1.51316 1.72632 13 a - - - 1.38629 1.38629 1.38629 1.38629 0.04226 3.87820 3.87820 1.46634 0.26236 0.14210 2.02141 12 1.94642 2.31214 2.71675 0.36806 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 13 1.79877 2.29207 0.47157 2.21256 15 G - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 14 0.25428 2.55461 2.71119 2.52138 16 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 15 2.03203 2.22339 2.01735 0.46572 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 16 2.96727 3.87892 0.10959 3.45193 18 G - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 17 0.23628 2.87895 2.78492 2.38042 19 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 18 0.80234 2.13288 2.24347 1.11738 20 a - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 19 2.32511 1.88448 2.84506 0.36790 21 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 20 2.50511 3.23632 0.21968 2.57370 22 G - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 21 0.11660 3.50399 3.20290 3.23546 23 A - - - 1.38629 1.38629 1.38629 1.38629 0.06594 3.05202 4.10157 0.59565 0.80118 1.09861 0.40547 22 1.81106 2.26467 2.63581 0.41401 25 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 23 1.93206 2.01626 1.95977 0.54282 26 U - - - 1.38629 1.38629 1.38629 1.38629 0.06499 3.07104 4.10157 0.60565 0.78904 1.09861 0.40547 24 1.75668 1.94139 1.51625 0.76713 28 u - - - 1.38629 1.38629 1.38629 1.38629 0.06238 3.12512 4.10157 0.63494 0.75495 1.09861 0.40547 25 0.68541 2.02947 1.80070 1.61180 30 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 26 1.84817 3.08481 0.31587 2.69438 31 G - - - 1.38629 1.38629 1.38629 1.38629 0.09941 2.55000 4.10157 0.38055 1.15039 1.09861 0.40547 27 3.16631 0.14697 3.73921 2.64865 33 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 28 0.67847 2.36017 1.41791 1.85801 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 29 2.75243 3.49846 0.13499 3.43390 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 30 0.24810 3.10366 2.07123 3.01998 36 A - - < 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 31 0.24798 3.10431 2.07138 3.02086 37 A - - < 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 32 2.96727 3.87892 0.10959 3.45193 38 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 33 0.11660 3.50399 3.20290 3.23546 39 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 34 2.96727 3.87892 0.10959 3.45193 40 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 35 3.24063 2.39607 2.91254 0.20402 41 U - - > 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 36 3.23870 2.39578 2.91173 0.20420 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 37 3.61446 0.16124 3.33726 2.44819 43 C - - > 1.38629 1.38629 1.38629 1.38629 0.11381 2.39665 4.10157 0.33080 1.26708 1.09861 0.40547 38 2.86115 2.78308 3.38747 0.16587 45 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 39 2.86115 2.78308 3.38747 0.16587 46 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 40 2.25335 3.37320 0.21105 2.97718 47 G - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 41 0.11660 3.50399 3.20290 3.23546 48 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 42 0.21798 2.94490 2.83123 2.47326 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 43 2.96727 3.87892 0.10959 3.45193 50 G - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 44 0.11660 3.50399 3.20290 3.23546 51 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 45 3.16631 0.14697 3.73921 2.64865 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 46 1.99787 2.09103 2.66915 0.39823 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 47 0.11660 3.50399 3.20290 3.23546 54 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 48 2.17478 2.39983 2.85596 0.30363 55 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 49 0.11660 3.50399 3.20290 3.23546 56 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 50 2.86115 2.78308 3.38747 0.16587 57 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 51 2.86115 2.78308 3.38747 0.16587 58 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 52 3.16631 0.14697 3.73921 2.64865 59 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 53 0.23691 2.99465 2.36518 2.70383 60 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 54 2.86115 2.78308 3.38747 0.16587 61 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 55 2.49383 0.30921 2.70130 2.15191 62 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 56 0.11660 3.50399 3.20290 3.23546 63 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 57 3.16631 0.14697 3.73921 2.64865 64 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 58 3.16631 0.14697 3.73921 2.64865 65 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 59 3.16631 0.14697 3.73921 2.64865 66 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 60 0.11660 3.50399 3.20290 3.23546 67 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 61 0.11660 3.50399 3.20290 3.23546 68 A - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 62 1.43900 2.18163 0.94250 1.34583 69 g - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 63 0.78553 1.82148 1.64590 1.66339 70 a - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 64 3.16631 0.14697 3.73921 2.64865 71 C - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 65 2.86115 2.78308 3.38747 0.16587 72 U - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 66 2.96727 3.87892 0.10959 3.45193 73 G - - - 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 67 0.11660 3.50399 3.20290 3.23546 74 A - - - 1.38629 1.38629 1.38629 1.38629 0.56785 1.21344 1.99448 0.54479 0.86742 1.09861 0.40547 68 0.95411 1.52152 2.12253 1.28469 78 a - - - 1.38629 1.38629 1.38629 1.38629 0.03831 3.97426 3.97426 1.46634 0.26236 0.21768 1.63162 69 1.24675 1.74686 1.28950 1.33624 79 a - - > 1.38629 1.38629 1.38629 1.38629 0.03365 4.10157 4.10157 1.46634 0.26236 1.09861 0.40547 70 1.38507 1.57688 1.36737 1.24376 80 u - - > 1.38629 1.38629 1.38629 1.38629 0.05728 4.10157 3.24107 1.46634 0.26236 1.09861 0.40547 71 1.26409 1.75964 1.27710 1.32218 81 a - - > 1.38629 1.38629 1.38629 1.38629 0.03444 4.07874 4.07874 1.46634 0.26236 0.61297 0.78032 72 1.22299 1.28511 1.96417 1.24216 82 a - - : 1.38629 1.38629 1.38629 1.38629 0.05373 4.10157 3.33083 1.46634 0.26236 1.09861 0.40547 73 1.11600 1.57586 1.77235 1.21858 83 a - - : 1.38629 1.38629 1.38629 1.38629 0.03432 4.08217 4.08217 1.46634 0.26236 1.42585 0.27484 74 1.27278 1.51504 2.20512 0.94184 84 u - - : 1.38629 1.38629 1.38629 1.38629 0.03432 4.08217 4.08217 1.46634 0.26236 1.42585 0.27484 75 1.28340 1.70761 2.06842 0.87895 85 u - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.06515 * 1.46634 0.26236 0.00000 * //