INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD77 ACC RF00591 DESC Small nucleolar RNA SNORD77 STATES 213 NODES 56 CLEN 68 W 87 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:49:26 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 21 EFFN 2.622437 CKSUM 107903124 NULL 0.000 0.000 0.000 0.000 GA 35.00 TC 35.00 NC 34.80 EFP7GF -9.7737 0.71901 ECMLC 0.61500 -5.61392 3.85736 1600000 406311 0.002953 ECMGC 0.39348 -14.27313 -0.68426 1600000 83984 0.004763 ECMLI 0.58101 -4.10740 5.49716 1600000 318181 0.003771 ECMGI 0.44805 -8.69861 2.62795 1600000 63983 0.006252 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 87 109 -7.104 -8.350 -0.068 -4.803 IL 1 1 2 1 4 1 25 88 111 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 26 88 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 75 - U - - MR 3 2 3 5 3 2 26 87 109 -8.582 -0.050 -4.989 -1.177 -1.295 -1.616 1.498 D 4 2 3 5 3 0 21 85 108 -6.390 -1.568 -0.620 IR 5 5 3 5 3 1 25 87 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 74 - C - - MR 6 5 3 8 5 2 26 86 108 -7.275 -0.034 -7.091 -7.303 -8.194 -1.721 1.565 -2.563 -0.816 D 7 5 3 8 5 0 20 84 107 -5.524 -0.879 -2.153 -4.581 -2.576 IR 8 8 3 8 5 1 24 86 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 1 73 A U - - MP 9 8 3 13 6 3 25 85 107 -9.196 -9.135 -0.020 -7.912 -8.191 -8.586 -3.607 -3.050 -1.782 3.366 -3.952 -4.732 -0.044 -3.831 -3.729 0.898 -4.264 -0.431 -0.292 -3.952 -1.820 -2.677 ML 10 8 3 13 6 1 21 83 106 -6.462 -6.808 -1.522 -0.819 -6.658 -4.187 0.734 -0.637 -0.350 -0.138 MR 11 8 3 13 6 1 21 83 106 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 3 13 6 0 16 81 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 23 84 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 23 84 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 2 72 U A - - MP 15 14 6 19 6 3 23 83 105 -9.196 -9.135 -0.020 -7.912 -8.191 -8.586 -4.009 -3.973 -3.853 -0.237 -2.743 -4.389 1.756 -3.475 -3.871 -0.014 -4.242 -1.980 3.121 -4.133 0.028 -2.726 ML 16 14 6 19 6 1 20 81 104 -6.462 -6.808 -1.045 -1.217 -6.658 -4.187 0.117 -0.374 -0.472 0.509 MR 17 14 6 19 6 1 19 81 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 16 79 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 21 82 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 21 82 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 71 A U - - MP 21 20 6 25 6 3 22 81 103 -9.212 -9.151 -0.020 -7.928 -8.208 -8.603 -4.247 -3.170 -4.223 3.561 -4.801 -5.916 -0.470 -4.233 -4.106 0.586 -4.675 -0.579 -0.885 -5.021 -2.408 -3.037 ML 22 20 6 25 6 1 19 80 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 18 79 102 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 16 78 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 20 80 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 20 80 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 70 C G - - MP 27 26 6 31 4 2 20 79 101 -7.207 -7.414 -0.044 -5.828 -4.598 -4.590 -4.276 -0.777 -2.940 -4.669 3.517 -3.762 -4.321 -0.584 -4.588 -2.588 0.597 -4.643 -0.003 -3.148 ML 28 26 6 31 4 1 18 79 101 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 17 78 101 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 15 77 100 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 19 80 102 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 19 79 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 5 - U - - - ML 33 32 6 35 3 1 18 77 99 -8.582 -0.016 -6.900 -0.292 -0.844 -1.166 1.125 D 34 32 6 35 3 0 15 75 98 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 17 77 100 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 69 - U - - MR 36 35 3 38 3 1 17 76 98 -8.582 -0.016 -6.900 -1.944 -1.862 -2.697 1.727 D 37 35 3 38 3 0 13 74 96 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 17 76 99 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 68 - A - - MR 39 38 3 41 3 1 16 75 97 -8.582 -0.016 -6.900 1.680 -2.334 -1.599 -1.910 D 40 38 3 41 3 0 13 73 95 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 16 75 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 67 - G - - MR 42 41 3 44 3 1 15 74 96 -8.582 -0.016 -6.900 -2.089 -3.381 1.816 -2.768 D 43 41 3 44 3 0 12 72 94 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 15 74 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 66 - U - - MR 45 44 3 47 3 1 14 73 95 -8.582 -0.016 -6.900 -1.944 -1.862 -2.697 1.727 D 46 44 3 47 3 0 11 71 93 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 14 73 96 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 65 - C - - MR 48 47 3 50 3 1 13 72 94 -8.582 -0.016 -6.900 -2.336 1.752 -3.167 -1.632 D 49 47 3 50 3 0 11 70 92 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 13 72 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 64 - U - - MR 51 50 3 53 3 1 12 71 93 -8.582 -0.016 -6.900 -1.944 -1.862 -2.697 1.727 D 52 50 3 53 3 0 10 69 92 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 12 71 94 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 63 - g - - MR 54 53 3 56 2 1 11 70 92 -8.643 -0.004 0.140 -1.516 0.976 -0.783 D 55 53 3 56 2 0 10 69 91 -4.432 -0.068 IR 56 56 3 56 2 1 11 70 93 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 15 ] - - - - - - B 57 56 3 58 159 0 10 69 91 [ BEGL 16 ] - - - - - - S 58 57 1 59 4 0 0 51 73 -0.065 -5.375 -6.378 -7.018 [ MATP 17 ] 6 43 a u - - MP 59 58 1 63 6 2 2 51 73 -9.194 -9.133 -0.020 -7.910 -8.189 -8.584 -3.456 -2.490 -3.522 2.565 -4.099 -4.614 0.191 -3.794 -3.496 2.166 -4.003 1.169 -0.062 -3.787 -1.708 -2.411 ML 60 58 1 63 6 1 1 49 72 -6.486 -6.832 -1.547 -0.801 -6.682 -4.212 0.215 -0.661 0.390 -0.158 MR 61 58 1 63 6 1 1 49 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 1 63 6 0 0 47 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 50 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 50 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 7 42 u a - - MP 65 64 6 69 6 2 2 49 71 -9.194 -9.133 -0.043 -5.654 -8.189 -8.584 -2.494 -2.577 -2.626 0.691 -2.281 -3.430 1.605 -2.757 -2.667 0.814 -3.201 -0.922 2.467 -0.770 0.508 -1.738 ML 66 64 6 69 6 1 1 47 70 -6.486 -6.832 -1.547 -0.801 -6.682 -4.212 0.094 -0.379 -0.497 0.541 MR 67 64 6 69 6 1 1 47 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 68 64 6 69 6 0 0 45 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 69 69 5 69 6 1 1 48 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 70 70 6 70 5 1 1 48 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 8 41 G C - - MP 71 70 6 75 6 2 2 47 69 -9.171 -5.834 -0.043 -7.887 -8.167 -8.562 -3.330 -2.440 -3.378 0.972 -3.779 -4.002 0.394 -3.780 -3.451 3.027 -1.156 0.762 0.133 -3.357 -1.458 -2.403 ML 72 70 6 75 6 1 1 45 68 -6.735 -7.081 -1.268 -0.959 -6.931 -4.461 0.018 -0.872 0.713 -0.318 MR 73 70 6 75 6 1 1 45 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 74 70 6 75 6 0 0 43 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 75 75 5 75 6 1 1 46 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 76 76 6 76 5 1 1 46 68 -2.543 -0.444 -6.054 -4.222 -5.328 0.000 0.000 0.000 0.000 [ MATP 20 ] 9 39 A U - - MP 77 76 6 81 6 2 2 45 67 -9.189 -9.129 -0.020 -7.905 -8.185 -8.580 -3.774 -1.330 -3.806 3.380 -4.403 -5.173 -0.263 -3.977 -3.774 1.055 -4.330 -0.423 -0.517 -4.297 -2.117 -2.719 ML 78 76 6 81 6 1 1 44 66 -6.539 -6.885 -0.967 -1.294 -6.735 -4.264 0.812 -0.697 -0.421 -0.184 MR 79 76 6 81 6 1 1 43 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 80 76 6 81 6 0 0 41 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 81 81 5 81 6 1 1 44 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 82 82 6 82 5 1 1 44 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 10 38 u a - - MP 83 82 6 87 4 2 2 43 65 -7.207 -3.407 -0.182 -5.828 -3.659 -3.653 -3.582 0.021 -2.605 -4.190 1.871 -3.294 -3.596 0.207 -4.010 -1.709 2.650 -3.830 1.397 -2.500 ML 84 82 6 87 4 1 1 42 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 85 82 6 87 4 1 1 42 64 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 86 82 6 87 4 0 0 41 63 -4.568 -4.250 -2.265 -0.520 IL 87 87 5 87 4 1 1 44 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 88 88 6 88 3 1 1 43 66 -1.183 -0.936 -4.762 0.000 0.000 0.000 0.000 [ MATL 22 ] 11 - G - - - ML 89 88 6 91 3 1 1 37 56 -8.206 -0.017 -6.861 -0.422 -2.192 1.438 -1.620 D 90 88 6 91 3 0 0 36 55 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 12 - G - - - ML 92 91 3 94 3 1 1 36 55 -8.582 -0.053 -4.916 -0.433 -0.900 1.061 -0.651 D 93 91 3 94 3 0 0 35 54 -5.620 -0.734 -1.403 IL 94 94 3 94 3 1 1 37 56 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 34 - A - - MR 95 94 3 97 3 1 1 35 54 -8.546 -0.016 -6.864 1.168 -1.003 -1.002 -0.406 D 96 94 3 97 3 0 0 34 52 -6.702 -1.101 -0.932 IR 97 97 3 97 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 33 - G - - MR 98 97 3 100 3 1 1 34 53 -8.582 -0.055 -4.852 -0.629 -1.648 1.260 -0.644 D 99 97 3 100 3 0 0 32 51 -6.390 -1.568 -0.620 IR 100 100 3 100 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 32 - U - - MR 101 100 3 103 3 1 1 33 52 -4.577 -0.075 -6.862 -0.433 -0.966 -0.666 1.082 D 102 100 3 103 3 0 0 31 50 -6.719 -1.897 -0.470 IR 103 103 3 103 3 1 1 34 52 -2.122 -0.471 -4.360 0.000 0.000 0.000 0.000 [ MATR 27 ] - 30 - U - - MR 104 103 3 106 3 1 1 32 51 -8.544 -0.016 -6.862 -1.866 -1.797 -2.617 1.711 D 105 103 3 106 3 0 0 30 49 -6.719 -1.082 -0.949 IR 106 106 3 106 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 28 ] - 29 - A - - MR 107 106 3 109 5 1 1 31 50 -7.307 -0.034 -7.122 -7.335 -8.226 1.806 -2.863 -2.446 -2.455 D 108 106 3 109 5 0 0 30 48 -5.352 -0.707 -2.978 -4.409 -2.404 IR 109 109 3 109 5 1 1 31 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 13 28 U G - - MP 110 109 3 114 6 2 2 30 49 -9.212 -9.151 -0.020 -7.928 -8.208 -8.603 -4.542 -4.577 -4.138 -0.867 -2.746 -4.468 1.740 -3.576 -4.198 -0.721 -4.438 -2.673 0.650 -4.553 3.185 -3.043 ML 111 109 3 114 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 3 114 6 1 1 28 47 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 3 114 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 30 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 29 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 14 27 U A - - MP 116 115 6 120 6 2 2 28 47 -9.212 -9.151 -0.020 -7.928 -8.208 -8.603 -4.791 -4.627 -4.560 -0.884 -3.383 -5.067 0.954 -4.117 -4.560 -0.705 -4.903 -2.507 3.553 -4.916 -1.045 -3.315 ML 117 115 6 120 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 119 115 6 120 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 120 120 5 120 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 121 121 6 121 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 15 26 G C - - MP 122 121 6 126 6 2 2 26 45 -9.212 -9.151 -0.020 -7.928 -8.208 -8.603 -5.217 -3.324 -5.376 -0.126 -5.898 -4.873 -1.144 -5.641 -4.624 3.734 -4.930 -1.045 -1.518 -4.775 -3.209 -4.246 ML 123 121 6 126 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 124 121 6 126 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 125 121 6 126 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 126 126 5 126 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 127 127 6 127 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 16 25 C G - - MP 128 127 6 132 4 2 2 24 43 -7.207 -7.414 -0.044 -5.828 -3.274 -3.332 -3.311 0.158 -1.025 -4.019 3.127 -0.946 -3.334 0.256 -3.804 -1.534 1.014 -3.516 -0.399 -2.322 ML 129 127 6 132 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 130 127 6 132 4 1 1 24 43 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 131 127 6 132 4 0 0 23 42 -4.568 -4.250 -2.265 -0.520 IL 132 132 5 132 4 1 1 26 45 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 133 133 6 133 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 17 - A - - - ML 134 133 6 136 3 1 1 21 40 -8.206 -0.017 -6.861 1.806 -2.863 -2.446 -2.455 D 135 133 6 136 3 0 0 20 39 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 18 - U - - - ML 137 136 3 139 3 1 1 20 38 -8.206 -0.017 -6.861 -1.944 -1.862 -2.697 1.727 D 138 136 3 139 3 0 0 19 38 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 19 - A - - - ML 140 139 3 142 3 1 1 19 37 -8.206 -0.017 -6.861 1.591 -1.573 -1.774 -1.476 D 141 139 3 142 3 0 0 18 37 -6.174 -1.687 -0.566 IL 142 142 3 142 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 20 - G - - - ML 143 142 3 145 3 1 1 17 36 -8.206 -0.017 -6.861 -2.089 -3.381 1.816 -2.768 D 144 142 3 145 3 0 0 17 36 -6.174 -1.687 -0.566 IL 145 145 3 145 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 21 - U - - - ML 146 145 3 148 3 1 1 16 35 -8.206 -0.017 -6.861 -1.944 -1.862 -2.697 1.727 D 147 145 3 148 3 0 0 16 34 -6.174 -1.687 -0.566 IL 148 148 3 148 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 22 - U - - - ML 149 148 3 151 3 1 1 15 33 -8.206 -0.017 -6.861 -1.944 -1.862 -2.697 1.727 D 150 148 3 151 3 0 0 15 33 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 23 - C - - - ML 152 151 3 154 3 1 1 13 31 -8.206 -0.017 -6.861 -2.336 1.752 -3.167 -1.632 D 153 151 3 154 3 0 0 13 32 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 24 - A - - - ML 155 154 3 157 2 1 1 1 1 * 0.000 1.806 -2.863 -2.446 -2.455 D 156 154 3 157 2 0 0 0 0 * 0.000 IL 157 157 3 157 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 41 ] - - - - - - E 158 157 3 -1 0 0 0 0 0 [ BEGR 42 ] - - - - - - S 159 57 1 160 3 0 0 33 52 -8.206 -0.017 -6.861 IL 160 160 2 160 3 1 1 36 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 44 - G - - - ML 161 160 2 163 3 1 1 32 52 -8.206 -0.017 -6.861 -1.307 -2.023 1.615 -1.801 D 162 160 2 163 3 0 0 31 51 -6.174 -1.687 -0.566 IL 163 163 3 163 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 45 - A - - - ML 164 163 3 166 3 1 1 31 51 -8.206 -0.140 -3.488 1.806 -2.863 -2.446 -2.455 D 165 163 3 166 3 0 0 30 50 -6.174 -1.687 -0.566 IL 166 166 3 166 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 46 - A - - - ML 167 166 3 169 3 1 1 30 50 -8.085 -0.019 -6.739 1.767 -2.617 -2.225 -2.184 D 168 166 3 169 3 0 0 29 49 -7.085 -2.598 -0.273 IL 169 169 3 169 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - G - - - ML 170 169 3 172 5 1 1 29 49 -7.200 -0.124 -3.937 -7.227 -8.119 -0.185 -1.919 1.298 -1.335 D 171 169 3 172 5 0 0 28 48 -5.540 -0.485 -4.801 -3.176 -3.089 IL 172 172 3 172 5 1 1 30 49 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 48 62 a u - - MP 173 172 3 177 6 2 2 28 48 -9.172 -9.112 -0.020 -7.888 -8.168 -8.563 -2.634 -2.330 -1.776 2.377 -2.765 -3.598 1.104 -3.019 -2.826 1.679 -3.345 0.057 1.088 -2.872 -0.673 -1.838 ML 174 172 3 177 6 1 1 27 47 -6.723 -7.069 -1.277 -0.953 -6.919 -4.448 0.972 -0.839 -0.580 -0.304 MR 175 172 3 177 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 176 172 3 177 6 0 0 24 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 177 177 5 177 6 1 1 28 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 178 178 6 178 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 49 61 g c - - MP 179 178 6 183 6 2 2 26 46 -9.190 -9.129 -0.020 -7.906 -8.185 -8.580 -2.940 -2.300 -1.697 1.903 -3.321 -3.879 0.673 -3.366 -3.111 2.193 -3.594 1.498 0.431 -3.128 -1.120 -2.052 ML 180 178 6 183 6 1 1 25 45 -6.535 -6.881 -0.971 -1.290 -6.731 -4.261 0.175 -0.700 0.460 -0.185 MR 181 178 6 183 6 1 1 25 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 182 178 6 183 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 183 183 5 183 6 1 1 26 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 184 184 6 184 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 50 60 a u - - MP 185 184 6 189 6 2 2 24 44 -9.212 -9.151 -0.057 -5.083 -8.208 -8.603 -1.486 -0.746 -2.239 1.928 -2.267 -3.055 1.226 -2.573 -2.316 1.608 -2.848 0.000 1.298 -2.351 -0.362 -1.430 ML 186 184 6 189 6 1 1 23 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 187 184 6 189 6 1 1 23 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 188 184 6 189 6 0 0 21 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 189 189 5 189 6 1 1 24 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 190 190 6 190 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 51 59 u a - - MP 191 190 6 195 6 2 2 22 42 -9.175 -9.114 -0.020 -7.891 -8.170 -8.565 -2.560 -2.541 -2.689 1.166 -2.327 -3.519 1.730 -2.789 -1.958 1.237 -3.255 -0.717 2.240 -2.832 0.026 -1.742 ML 192 190 6 195 6 1 1 22 41 -6.697 -7.043 -1.757 -0.662 -6.893 -4.422 0.951 -0.818 -0.558 -0.286 MR 193 190 6 195 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 194 190 6 195 6 0 0 20 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 195 195 5 195 6 1 1 22 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 196 196 6 196 5 1 1 22 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 51 ] 52 58 c g - - MP 197 196 6 201 4 2 2 20 40 -7.118 -7.325 -0.138 -3.688 -0.796 -1.325 -1.752 1.327 -1.750 -1.965 1.404 -1.509 -1.774 1.344 -2.304 0.019 1.341 -1.010 -0.002 -0.753 ML 198 196 6 201 4 1 1 21 40 -4.103 -4.286 -0.383 -3.015 -0.061 0.468 -0.762 0.095 MR 199 196 6 201 4 1 1 20 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 200 196 6 201 4 0 0 19 39 -4.568 -4.250 -2.265 -0.520 IL 201 201 5 201 4 1 1 22 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 202 202 6 202 3 1 1 21 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 53 - u - - - ML 203 202 6 205 3 1 1 18 38 -8.129 -0.018 -6.784 -0.021 -0.528 -1.228 0.922 D 204 202 6 205 3 0 0 16 36 -6.824 -1.423 -0.694 IL 205 205 3 205 3 1 1 20 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 54 - a - - - ML 206 205 3 208 3 1 1 17 36 -3.347 -0.164 -6.821 0.875 -0.847 -0.283 -0.342 D 207 205 3 208 3 0 0 14 33 -6.546 -2.059 -0.416 IL 208 208 3 208 3 1 1 18 38 -1.366 -0.804 -4.675 0.000 0.000 0.000 0.000 [ MATL 54 ] 57 - C - - - ML 209 208 3 211 2 1 1 1 1 * 0.000 -0.536 1.007 -1.612 -0.038 D 210 208 3 211 2 0 0 0 0 * 0.000 IL 211 211 3 211 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 212 211 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD77 ACC RF00591 DESC Small nucleolar RNA SNORD77 LENG 68 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:49:26 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 21 EFFN 3.858032 CKSUM 107903124 STATS LOCAL MSV -8.3962 0.71901 STATS LOCAL VITERBI -8.8998 0.71901 STATS LOCAL FORWARD -3.7475 0.71901 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.30389 1.71786 1.42973 1.17214 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 0.00000 * 1 0.20929 3.29833 2.23130 3.11212 1 A - - ( 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 2 3.01460 1.61983 2.81223 0.36682 2 U - - ( 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 3 0.16459 3.54447 2.40163 3.43245 3 A - - ( 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 4 3.40159 0.23930 3.22219 1.96872 4 C - - ( 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 5 1.65998 2.10112 2.30989 0.53058 5 U - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 6 0.81652 2.82880 0.85030 2.63581 6 a - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 7 2.15922 1.60547 2.01754 0.59637 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 8 2.04390 2.63481 0.33634 2.47258 8 G - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 9 0.22365 3.36482 2.09562 3.15025 9 A - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 10 2.80983 1.52824 2.61464 0.43129 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 11 1.78512 3.21945 0.30901 2.84601 11 G - - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 12 1.83887 2.07493 0.54096 2.01555 12 G - - - 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 13 3.50728 1.67644 3.37062 0.28953 13 U - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 14 3.73058 2.50683 3.56090 0.14378 14 U - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 15 2.98745 3.83518 0.09976 3.77541 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 16 2.69864 0.36352 2.52617 1.84824 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 17 0.08095 3.85020 3.51982 3.61621 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 18 3.19681 3.06538 3.73183 0.11820 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 19 0.21170 2.63184 2.91579 2.73825 19 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 20 3.29992 4.24663 0.07623 3.80784 20 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 21 3.19681 3.06538 3.73183 0.11820 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 22 3.19681 3.06538 3.73183 0.11820 22 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 23 3.57295 0.09935 4.12313 2.98953 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 24 0.08095 3.85020 3.51982 3.61621 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 25 1.88271 2.69592 0.41619 2.11372 25 G - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 26 3.94999 0.11976 3.69128 2.67839 26 C - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 27 0.16240 3.76521 2.34337 3.48231 27 A - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 28 2.45649 3.53992 0.16562 3.27339 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 29 0.08095 3.85020 3.51982 3.61621 29 A - - - 1.38629 1.38629 1.38629 1.38629 0.06467 4.14866 3.06108 1.46634 0.26236 1.09861 0.40547 30 3.13602 3.01394 3.66967 0.12561 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.08250 2.76625 4.11711 0.45610 1.00444 1.60283 0.22480 31 1.80476 2.21614 1.88344 0.55445 32 U - - - 1.38629 1.38629 1.38629 1.38629 0.03313 4.11711 4.11711 1.46634 0.26236 0.51525 0.90969 32 1.99086 2.75862 0.41929 1.94820 33 G - - - 1.38629 1.38629 1.38629 1.38629 0.06277 4.14866 3.09982 1.46634 0.26236 1.09861 0.40547 33 0.50304 2.17918 2.20533 1.76047 34 A - - - 1.38629 1.38629 1.38629 1.38629 0.13702 2.19115 4.11895 0.93054 0.50144 0.53103 0.88673 34 0.76777 2.78773 0.91643 2.59761 38 a - - > 1.38629 1.38629 1.38629 1.38629 0.07243 4.14866 2.91731 1.46634 0.26236 1.09861 0.40547 35 3.39104 2.20023 3.19154 0.20525 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.10986 2.88856 3.02862 0.51206 0.91444 1.69117 0.20371 36 2.73552 0.55052 2.13368 1.42674 41 C - - > 1.38629 1.38629 1.38629 1.38629 0.03450 4.07712 4.07712 1.46634 0.26236 0.76654 0.62478 37 0.87955 1.87118 1.23022 1.97431 42 a - - > 1.38629 1.38629 1.38629 1.38629 0.03311 4.11743 4.11743 1.46634 0.26236 1.59890 0.22579 38 2.88579 1.29151 2.64793 0.51327 43 U - - > 1.38629 1.38629 1.38629 1.38629 0.03311 4.11743 4.11743 1.46634 0.26236 0.51791 0.90576 39 2.62652 2.98436 0.18904 3.00888 44 G - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 40 0.08095 3.85020 3.51982 3.61621 45 A - - , 1.38629 1.38629 1.38629 1.38629 0.12949 4.14866 2.24742 1.46634 0.26236 1.09861 0.40547 41 0.09864 3.66191 3.34683 3.40965 46 A - - , 1.38629 1.38629 1.38629 1.38629 0.03531 4.05447 4.05447 1.46634 0.26236 2.16265 0.12219 42 1.59477 2.99983 0.39430 2.61599 47 G - - , 1.38629 1.38629 1.38629 1.38629 0.03531 4.05447 4.05447 1.46634 0.26236 0.26142 1.46951 43 0.86148 1.98785 1.37495 1.67332 48 a - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 44 1.21908 2.38592 0.68868 2.20495 49 G - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 45 1.06486 1.78903 1.38331 1.43819 50 a - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 46 1.67786 1.52805 1.65364 0.90407 51 u - - < 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 47 1.42736 1.49493 1.39115 1.24825 52 u - - < 1.38629 1.38629 1.38629 1.38629 0.09388 4.14866 2.60606 1.46634 0.26236 1.09861 0.40547 48 1.42545 1.80622 2.36728 0.68997 53 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03409 4.08887 4.08887 1.46634 0.26236 0.87824 0.53702 49 0.72922 2.03377 1.58684 1.70208 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.14938 2.09975 4.11817 0.68235 0.70407 1.58974 0.22813 50 1.88931 0.58531 2.73920 1.48163 57 C - - _ 1.38629 1.38629 1.38629 1.38629 0.10224 4.11817 2.51436 1.46634 0.26236 0.52418 0.89659 51 1.46190 1.43744 1.39558 1.26238 58 u - - > 1.38629 1.38629 1.38629 1.38629 0.03426 4.08391 4.08391 1.46634 0.26236 1.94189 0.15482 52 1.00594 1.84325 1.29477 1.59931 59 a - - > 1.38629 1.38629 1.38629 1.38629 0.03426 4.08391 4.08391 1.46634 0.26236 0.33809 1.24874 53 1.57587 1.46538 1.58717 1.02812 60 u - - > 1.38629 1.38629 1.38629 1.38629 0.07183 4.14866 2.92760 1.46634 0.26236 1.09861 0.40547 54 2.45634 1.21549 2.06470 0.71165 61 u - - > 1.38629 1.38629 1.38629 1.38629 0.06532 4.11019 3.06135 1.46634 0.26236 1.68469 0.20518 55 1.84860 1.59380 1.71399 0.77817 62 u - - > 1.38629 1.38629 1.38629 1.38629 0.03442 4.07929 4.07929 1.46634 0.26236 0.32303 1.28718 56 1.32417 2.63611 0.61816 2.09233 63 G - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 57 3.19681 3.06538 3.73183 0.11820 64 U - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 58 3.57295 0.09935 4.12313 2.98953 65 C - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 59 3.19681 3.06538 3.73183 0.11820 66 U - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 60 3.29992 4.24663 0.07623 3.80784 67 G - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 61 0.15875 3.35698 2.69346 3.11662 68 A - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 62 3.19681 3.06538 3.73183 0.11820 69 U - - , 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 63 2.47096 3.38372 0.17476 3.17201 70 G - - ) 1.38629 1.38629 1.38629 1.38629 0.03208 4.14866 4.14866 1.46634 0.26236 1.09861 0.40547 64 3.66364 2.76812 3.36312 0.13130 71 U - - ) 1.38629 1.38629 1.38629 1.38629 0.06072 4.14866 3.14353 1.46634 0.26236 1.09861 0.40547 65 0.44841 2.98264 1.38742 2.79718 72 A - - ) 1.38629 1.38629 1.38629 1.38629 0.03300 4.12093 4.12093 1.46634 0.26236 1.55440 0.23739 66 3.37466 2.60156 2.84668 0.18203 73 U - - ) 1.38629 1.38629 1.38629 1.38629 0.03300 4.12093 4.12093 1.46634 0.26236 1.55440 0.23739 67 3.00795 0.20910 3.59920 2.18975 74 C - - : 1.38629 1.38629 1.38629 1.38629 0.03300 4.12093 4.12093 1.46634 0.26236 0.54928 0.86125 68 2.51433 2.54765 2.71765 0.25517 75 U - - : 1.38629 1.38629 1.38629 1.38629 0.01617 4.13275 * 1.46634 0.26236 0.00000 * //