INFERNAL1/a [1.1.4 | Dec 2020] NAME SNORD110 ACC RF00610 DESC Small nucleolar RNA SNORD110 STATES 217 NODES 69 CLEN 71 W 92 ALPH RNA RF no CONS yes MAP yes DATE Thu Feb 20 18:50:14 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.167969 CKSUM 2371490111 NULL 0.000 0.000 0.000 0.000 GA 64.00 TC 64.20 NC 51.80 EFP7GF -8.5885 0.71880 ECMLC 0.69502 -5.30384 3.04452 1600000 397269 0.003021 ECMGC 0.37148 -18.68265 -3.98196 1600000 94139 0.004249 ECMLI 0.64912 -3.55136 4.92593 1600000 294448 0.004075 ECMGI 0.41438 -12.28751 0.09985 1600000 67813 0.005899 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 92 118 -9.144 -9.084 -0.039 -7.860 -5.967 -8.535 IL 1 1 2 1 6 1 26 93 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 1 26 93 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 81 U A - - MP 3 2 3 7 6 2 28 92 118 -9.126 -9.065 -0.021 -7.842 -8.122 -8.517 -4.299 -4.127 -4.125 -0.414 -3.044 -4.679 1.286 -3.748 -4.129 -0.176 -4.497 -2.023 3.378 -4.446 -0.718 -2.942 ML 4 2 3 7 6 1 23 90 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 1 23 90 116 -7.186 -5.915 -1.824 -5.893 -0.691 -4.107 0.749 -0.649 -0.363 -0.146 D 6 2 3 7 6 0 18 87 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 1 25 91 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 1 25 91 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 80 U A - - MP 9 8 6 13 6 2 27 90 116 -9.126 -9.065 -0.021 -7.842 -8.122 -8.517 -4.299 -4.127 -4.125 -0.414 -3.044 -4.679 1.286 -3.748 -4.129 -0.176 -4.497 -2.023 3.378 -4.446 -0.718 -2.942 ML 10 8 6 13 6 1 23 88 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 1 21 88 114 -7.186 -5.915 -1.824 -5.893 -0.691 -4.107 0.749 -0.649 -0.363 -0.146 D 12 8 6 13 6 0 18 86 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 1 24 89 115 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 1 24 89 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 79 G C - - MP 15 14 6 19 6 2 25 88 114 -9.126 -9.065 -0.021 -7.842 -8.122 -8.517 -4.834 -3.138 -4.943 0.138 -5.363 -4.730 -0.705 -5.191 -4.388 3.660 -4.718 -0.841 -1.087 -4.528 -2.747 -3.818 ML 16 14 6 19 6 1 22 87 113 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 1 20 86 112 -7.186 -5.915 -1.824 -5.893 -0.691 -4.107 0.116 0.177 -0.565 0.150 D 18 14 6 19 6 0 18 84 110 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 23 87 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 23 87 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 4 78 C G - - MP 21 20 6 25 4 2 23 86 112 -6.997 -7.204 -0.051 -5.618 -4.652 -4.567 -4.325 -0.790 -3.020 -4.723 3.582 -3.841 -4.378 -0.564 -4.627 -2.516 0.484 -4.715 -0.729 -3.214 ML 22 20 6 25 4 1 21 85 112 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 4 1 18 85 111 -5.036 -4.065 -1.932 -0.627 0.223 -0.653 0.375 -0.152 D 24 20 6 25 4 0 17 84 110 -4.568 -4.250 -2.265 -0.520 IL 25 25 5 25 4 1 22 87 113 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 26 26 6 26 3 1 22 86 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - A - - - ML 27 26 6 29 3 1 22 84 110 -8.010 -0.020 -6.664 1.553 -1.920 -1.201 -1.446 D 28 26 6 29 3 0 17 82 108 -6.538 -2.051 -0.419 IL 29 29 3 29 3 1 21 85 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - g - - - ML 30 29 3 32 3 1 21 83 109 -8.010 -0.020 -6.664 0.499 -1.493 0.762 -0.902 D 31 29 3 32 3 0 16 81 107 -6.538 -2.051 -0.419 IL 32 32 3 32 3 1 20 84 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - U - - - ML 33 32 3 35 3 1 20 82 108 -8.010 -0.020 -6.664 -1.570 -1.552 -2.308 1.642 D 34 32 3 35 3 0 15 80 106 -6.538 -2.051 -0.419 IL 35 35 3 35 3 1 20 83 109 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - G - - - ML 36 35 3 38 3 1 19 81 107 -8.010 -0.020 -6.664 -1.677 -2.912 1.745 -2.300 D 37 35 3 38 3 0 15 79 105 -6.538 -2.051 -0.419 IL 38 38 3 38 3 1 19 82 108 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 39 38 3 41 3 1 18 80 106 -8.010 -0.020 -6.664 1.738 -2.463 -2.086 -2.015 D 40 38 3 41 3 0 14 78 104 -6.538 -1.107 -0.930 IL 41 41 3 41 3 1 18 81 107 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - U - - - ML 42 41 3 44 3 1 17 79 105 -4.457 -0.082 -6.706 -1.650 -1.618 -2.392 1.662 D 43 41 3 44 3 0 13 77 103 -6.174 -1.687 -0.566 IL 44 44 3 44 3 1 17 80 106 -1.356 -0.830 -4.412 0.000 0.000 0.000 0.000 [ MATL 11 ] 13 - G - - - ML 45 44 3 47 3 1 16 77 104 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 46 44 3 47 3 0 13 76 102 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 16 79 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 14 - A - - - ML 48 47 3 50 3 1 15 76 103 -8.052 -0.019 -6.706 1.755 -2.550 -2.164 -2.110 D 49 47 3 50 3 0 12 75 101 -6.174 -1.687 -0.566 IL 50 50 3 50 3 1 15 78 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 15 - C - - - ML 51 50 3 53 3 1 14 75 102 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 52 50 3 53 3 0 12 74 100 -6.174 -1.687 -0.566 IL 53 53 3 53 3 1 14 77 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 16 - U - - - ML 54 53 3 56 3 1 13 74 101 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 55 53 3 56 3 0 11 73 99 -6.174 -1.687 -0.566 IL 56 56 3 56 3 1 14 76 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 17 - U - - - ML 57 56 3 59 3 1 12 73 100 -8.052 -0.302 -2.433 -0.728 -0.557 -1.246 1.199 D 58 56 3 59 3 0 11 72 98 -6.174 -1.687 -0.566 IL 59 59 3 59 3 1 13 75 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 18 - G - - - ML 60 59 3 62 3 1 12 73 99 -2.882 -0.583 -2.344 -0.088 -1.563 1.141 -0.959 D 61 59 3 62 3 0 10 71 97 -7.621 -0.631 -1.519 IL 62 62 3 62 3 1 14 73 100 -1.359 -0.807 -4.700 0.000 0.000 0.000 0.000 [ MATL 17 ] 22 - a - - - ML 63 62 3 65 3 1 13 71 97 -7.765 -0.024 -6.419 0.761 -0.858 -0.417 0.006 D 64 62 3 65 3 0 8 68 95 -7.648 -3.161 -0.179 IL 65 65 3 65 3 1 13 72 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 23 - u - - - ML 66 65 3 68 3 1 13 70 96 -3.425 -0.160 -6.419 0.203 -0.502 -0.404 0.472 D 67 65 3 68 3 0 8 68 94 -7.648 -3.161 -0.179 IL 68 68 3 68 3 1 12 71 97 -1.679 -0.645 -4.379 0.000 0.000 0.000 0.000 [ MATL 19 ] 25 - a - - - ML 69 68 3 71 3 1 12 69 95 -7.765 -0.024 -6.419 0.798 -0.843 -0.616 0.073 D 70 68 3 71 3 0 8 67 94 -7.648 -0.412 -2.040 IL 71 71 3 71 3 1 11 70 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 26 - a - - - ML 72 71 3 74 3 1 11 68 94 -8.052 -0.019 -6.706 0.947 -1.009 -0.735 -0.038 D 73 71 3 74 3 0 5 66 92 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 10 69 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 27 - A - - - ML 75 74 3 77 3 1 10 67 93 -8.052 -0.019 -6.706 1.185 -1.304 -0.586 -0.612 D 76 74 3 77 3 0 5 65 91 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 9 68 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 28 - U - - - ML 78 77 3 80 3 1 10 66 92 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 79 77 3 80 3 0 4 64 90 -6.174 -1.687 -0.566 IL 80 80 3 80 3 1 8 67 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 29 - C - - - ML 81 80 3 83 3 1 9 65 91 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 82 80 3 83 3 0 3 63 89 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 8 66 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 30 - U - - - ML 84 83 3 86 3 1 8 64 90 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 85 83 3 86 3 0 2 62 88 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 7 65 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 31 - G - - - ML 87 86 3 89 3 1 8 63 89 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 88 86 3 89 3 0 2 61 87 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 6 64 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 32 - U - - - ML 90 89 3 92 3 1 7 62 88 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 91 89 3 92 3 0 1 60 86 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 6 63 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 33 - C - - - ML 93 92 3 95 3 1 7 61 87 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 94 92 3 95 3 0 0 59 85 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 5 62 88 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 34 - A - - - ML 96 95 3 98 3 1 6 60 86 -8.052 -0.019 -6.706 1.755 -2.550 -2.164 -2.110 D 97 95 3 98 3 0 0 58 84 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 4 61 87 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 35 - A - - - ML 99 98 3 101 3 1 5 59 85 -8.052 -0.019 -6.706 1.755 -2.550 -2.164 -2.110 D 100 98 3 101 3 0 0 57 83 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 4 60 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 36 - U - - - ML 102 101 3 104 3 1 5 58 84 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 103 101 3 104 3 0 0 56 82 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 3 59 85 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 37 - C - - - ML 105 104 3 107 3 1 4 57 83 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 106 104 3 107 3 0 0 55 81 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 3 58 84 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 38 - C - - - ML 108 107 3 110 3 1 4 56 82 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 109 107 3 110 3 0 0 54 80 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 2 57 83 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 39 - C - - - ML 111 110 3 113 3 1 3 55 81 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 112 110 3 113 3 0 0 53 79 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 2 56 82 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 40 - C - - - ML 114 113 3 116 3 1 3 54 80 -8.052 -0.019 -6.706 -1.083 1.348 -1.454 -0.698 D 115 113 3 116 3 0 0 52 78 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 1 55 81 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 41 - U - - - ML 117 116 3 119 3 1 2 53 79 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 118 116 3 119 3 0 0 51 77 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 1 54 80 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 42 - G - - - ML 120 119 3 122 3 1 2 52 78 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 121 119 3 122 3 0 0 50 76 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 1 53 79 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 43 - A - - - ML 123 122 3 125 3 1 2 51 77 -8.052 -0.019 -6.706 1.755 -2.550 -2.164 -2.110 D 124 122 3 125 3 0 0 49 75 -6.174 -1.687 -0.566 IL 125 125 3 125 3 1 1 52 78 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 44 - G - - - ML 126 125 3 128 3 1 1 50 76 -8.052 -0.019 -6.706 -1.069 -2.508 1.624 -1.916 D 127 125 3 128 3 0 0 48 74 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 1 51 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 45 - U - - - ML 129 128 3 131 3 1 1 48 75 -8.052 -0.019 -6.706 -0.554 -1.070 -1.586 1.327 D 130 128 3 131 3 0 0 46 73 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 1 50 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 46 - G - - - ML 132 131 3 134 3 1 1 47 74 -4.201 -0.240 -3.337 -0.502 -1.439 1.296 -1.093 D 133 131 3 134 3 0 0 45 71 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 1 51 77 -1.013 -1.099 -4.726 0.000 0.000 0.000 0.000 [ MATL 41 ] 51 - c - - - ML 135 134 3 137 3 1 1 42 61 -7.917 -0.021 -6.571 -0.791 0.922 -1.591 0.257 D 136 134 3 137 3 0 0 40 60 -7.084 -2.597 -0.273 IL 137 137 3 137 3 1 1 44 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 52 - A - - - ML 138 137 3 140 3 1 1 41 60 -7.917 -0.021 -6.571 1.029 -1.047 -0.687 -0.227 D 139 137 3 140 3 0 0 40 59 -7.084 -0.660 -1.476 IL 140 140 3 140 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 53 - a - - - ML 141 140 3 143 3 1 1 40 59 -8.052 -0.019 -6.706 0.802 -0.906 0.054 -0.548 D 142 140 3 143 3 0 0 38 58 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 1 42 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 54 - U - - - ML 144 143 3 146 3 1 1 39 58 -8.052 -0.019 -6.706 -1.210 -0.935 -1.947 1.478 D 145 143 3 146 3 0 0 37 57 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 1 41 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 55 - C - - - ML 147 146 3 149 3 1 1 38 57 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 148 146 3 149 3 0 0 36 56 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 56 - A - - - ML 150 149 3 152 3 1 1 37 56 -8.052 -0.019 -6.706 1.322 -1.629 -0.489 -1.108 D 151 149 3 152 3 0 0 35 55 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 57 - c - - - ML 153 152 3 155 3 1 1 36 55 -8.052 -0.019 -6.706 -0.538 0.869 -1.489 0.174 D 154 152 3 155 3 0 0 34 54 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 58 - U - - - ML 156 155 3 158 3 1 1 34 54 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 157 155 3 158 3 0 0 33 53 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 59 - G - - - ML 159 158 3 161 3 1 1 33 53 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 160 158 3 161 3 0 0 32 51 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 60 - A - - - ML 162 161 3 164 3 1 1 32 51 -8.052 -0.019 -6.706 1.755 -2.550 -2.164 -2.110 D 163 161 3 164 3 0 0 31 50 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 61 - U - - - ML 165 164 3 167 3 1 1 31 50 -8.052 -0.019 -6.706 -0.524 -0.581 -1.448 1.182 D 166 164 3 167 3 0 0 30 49 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 34 53 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 62 - G - - - ML 168 167 3 170 3 1 1 30 49 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 169 167 3 170 3 0 0 29 48 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 63 - U - - - ML 171 170 3 173 3 1 1 29 48 -8.052 -0.019 -6.706 -0.317 -0.997 -1.451 1.221 D 172 170 3 173 3 0 0 28 47 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 31 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 64 - C - - - ML 174 173 3 176 3 1 1 28 47 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 175 173 3 176 3 0 0 27 46 -6.174 -1.687 -0.566 IL 176 176 3 176 3 1 1 30 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 65 - U - - - ML 177 176 3 179 3 1 1 27 46 -8.052 -0.019 -6.706 -0.408 -1.024 -1.502 1.264 D 178 176 3 179 3 0 0 26 45 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 29 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 66 - C - - - ML 180 179 3 182 3 1 1 26 45 -8.052 -0.019 -6.706 -0.550 1.122 -1.291 -0.452 D 181 179 3 182 3 0 0 25 44 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 67 - c - - - ML 183 182 3 185 3 1 1 25 43 -8.052 -0.019 -6.706 -0.300 0.898 -1.437 -0.066 D 184 182 3 185 3 0 0 24 43 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 68 - A - - - ML 186 185 3 188 3 1 1 23 42 -8.052 -0.019 -6.706 1.179 -1.001 -0.665 -0.726 D 187 185 3 188 3 0 0 22 41 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 69 - U - - - ML 189 188 3 191 3 1 1 22 41 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 190 188 3 191 3 0 0 21 40 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 70 - G - - - ML 192 191 3 194 3 1 1 21 40 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 193 191 3 194 3 0 0 20 39 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 71 - U - - - ML 195 194 3 197 3 1 1 20 39 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 196 194 3 197 3 0 0 19 38 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 72 - C - - - ML 198 197 3 200 3 1 1 19 37 -8.052 -0.019 -6.706 -0.778 1.099 -1.115 -0.297 D 199 197 3 200 3 0 0 18 37 -6.174 -1.687 -0.566 IL 200 200 3 200 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 73 - U - - - ML 201 200 3 203 3 1 1 17 36 -8.052 -0.019 -6.706 -1.160 -0.837 -1.897 1.446 D 202 200 3 203 3 0 0 17 36 -6.174 -1.687 -0.566 IL 203 203 3 203 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 74 - C - - - ML 204 203 3 206 3 1 1 16 35 -8.052 -0.019 -6.706 -1.957 1.678 -2.786 -1.327 D 205 203 3 206 3 0 0 16 34 -6.174 -1.687 -0.566 IL 206 206 3 206 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 75 - U - - - ML 207 206 3 209 3 1 1 15 33 -8.052 -0.019 -6.706 -1.650 -1.618 -2.392 1.662 D 208 206 3 209 3 0 0 15 33 -6.174 -1.687 -0.566 IL 209 209 3 209 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 76 - G - - - ML 210 209 3 212 3 1 1 13 31 -8.052 -0.019 -6.706 -1.768 -3.017 1.763 -2.404 D 211 209 3 212 3 0 0 13 32 -6.174 -1.687 -0.566 IL 212 212 3 212 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 77 - A - - - ML 213 212 3 215 2 1 1 1 1 * 0.000 1.755 -2.550 -2.164 -2.110 D 214 212 3 215 2 0 0 0 0 * 0.000 IL 215 215 3 215 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 216 215 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME SNORD110 ACC RF00610 DESC Small nucleolar RNA SNORD110 LENG 71 MAXL 156 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Feb 20 18:50:14 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 16 EFFN 2.324219 CKSUM 2371490111 STATS LOCAL MSV -8.7042 0.71880 STATS LOCAL VITERBI -9.2292 0.71880 STATS LOCAL FORWARD -3.6090 0.71880 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.39609 1.44864 1.50810 1.21666 1.38629 1.38629 1.38629 1.38629 0.07210 3.96690 2.98325 1.46634 0.26236 0.00000 * 1 2.92186 1.84690 2.64591 0.33198 1 U - - < 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 2 2.90873 1.84633 2.64040 0.33365 2 U - - < 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 3 2.54642 3.17485 0.17960 3.11828 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 4 3.13197 0.25752 2.89396 2.05535 4 C - - < 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 5 0.29517 2.76661 2.24523 2.44394 5 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 6 1.03673 2.45621 0.84248 2.04806 6 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 7 2.54424 2.51945 3.05887 0.23064 7 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 8 2.62753 3.49517 0.16133 3.07066 8 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 1.54206 0.24072 9 0.16726 3.16893 2.89994 2.86559 9 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03989 3.93469 3.93469 1.46634 0.26236 0.55841 0.84891 10 2.60231 2.56758 3.11941 0.21692 10 U - - _ 1.38629 1.38629 1.38629 1.38629 0.08686 2.74480 3.96690 0.90323 0.51963 1.09861 0.40547 11 2.69194 3.56866 0.14971 3.14418 13 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 12 0.15632 3.23115 2.95602 2.93417 14 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 13 2.83645 0.20339 3.41241 2.38118 15 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 14 2.60231 2.56758 3.11941 0.21692 16 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 15 1.92318 1.78519 2.27471 0.53911 17 U - - _ 1.38629 1.38629 1.38629 1.38629 0.25922 3.96690 1.56346 1.46634 0.26236 1.09861 0.40547 16 1.46117 2.50740 0.57473 2.08993 18 G - - _ 1.38629 1.38629 1.38629 1.38629 0.50482 1.78256 1.47762 0.69219 0.69411 0.32328 1.28653 17 0.85119 1.99315 1.67792 1.38604 22 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04825 3.74846 3.74846 1.46634 0.26236 2.59261 0.07777 18 1.24630 1.73922 1.66568 1.05637 23 u - - _ 1.38629 1.38629 1.38629 1.38629 0.15661 2.10860 3.74846 0.35112 1.21706 2.59261 0.07777 19 0.82527 1.98292 1.82029 1.33850 25 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04825 3.74846 3.74846 1.46634 0.26236 0.16211 1.89946 20 0.71920 2.10415 1.90672 1.41740 26 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 21 0.55227 2.31524 1.79967 1.83096 27 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 22 2.60231 2.56758 3.11941 0.21692 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 23 2.83645 0.20339 3.41241 2.38118 29 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 24 2.60231 2.56758 3.11941 0.21692 30 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 25 2.69194 3.56866 0.14971 3.14418 31 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 26 2.60231 2.56758 3.11941 0.21692 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 27 2.83645 0.20339 3.41241 2.38118 33 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 28 0.15632 3.23115 2.95602 2.93417 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 29 0.15632 3.23115 2.95602 2.93417 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 30 2.60231 2.56758 3.11941 0.21692 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 31 2.83645 0.20339 3.41241 2.38118 37 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 32 2.83645 0.20339 3.41241 2.38118 38 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 33 2.83645 0.20339 3.41241 2.38118 39 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 34 2.19620 0.42471 2.43298 1.91706 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 35 2.60231 2.56758 3.11941 0.21692 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 36 2.69194 3.56866 0.14971 3.14418 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 37 0.15632 3.23115 2.95602 2.93417 43 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 38 2.17383 3.19312 0.24395 2.78560 44 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 39 1.79511 2.16193 2.52701 0.44802 45 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 40 1.76144 2.40941 0.46835 2.18660 46 G - - _ 1.38629 1.38629 1.38629 1.38629 0.21044 2.60592 2.15469 1.40048 0.28300 1.09861 0.40547 41 1.96919 0.72658 2.52842 1.21373 51 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04284 3.86486 3.86486 1.46634 0.26236 2.09482 0.13135 42 0.66216 2.13007 1.87253 1.55259 52 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04284 3.86486 3.86486 1.46634 0.26236 0.28261 1.40167 43 0.82199 2.02601 1.34209 1.78805 53 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 44 2.27509 2.06088 2.78728 0.34491 54 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 45 2.83645 0.20339 3.41241 2.38118 55 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 46 0.45590 2.55508 1.72943 2.19780 56 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 47 1.78221 0.76494 2.45237 1.27197 57 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 48 2.60231 2.56758 3.11941 0.21692 58 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 49 2.69194 3.56866 0.14971 3.14418 59 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 50 0.15632 3.23115 2.95602 2.93417 60 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 51 1.77132 1.80189 2.42212 0.55135 61 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 52 2.69194 3.56866 0.14971 3.14418 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 53 1.62210 2.10725 2.42700 0.52316 63 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 54 2.83645 0.20339 3.41241 2.38118 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 55 1.68885 2.12747 2.46505 0.49245 65 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 56 1.79700 0.58407 2.31105 1.72920 66 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 57 1.61035 0.74416 2.41577 1.44497 67 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 58 0.55539 2.09437 1.85721 1.91804 68 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 59 2.60231 2.56758 3.11941 0.21692 69 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 60 2.69194 3.56866 0.14971 3.14418 70 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 61 2.60231 2.56758 3.11941 0.21692 71 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 62 1.96494 0.60089 2.18132 1.61637 72 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 63 2.23817 1.98969 2.75096 0.36710 73 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 64 2.83645 0.20339 3.41241 2.38118 74 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 65 2.60231 2.56758 3.11941 0.21692 75 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 66 2.69194 3.56866 0.14971 3.14418 76 G - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 67 0.15632 3.23115 2.95602 2.93417 77 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 68 2.32983 3.05993 0.22330 2.88382 78 G - - > 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 69 3.31085 0.21450 3.00496 2.23465 79 C - - > 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 70 0.38133 2.81470 1.68381 2.63860 80 A - - > 1.38629 1.38629 1.38629 1.38629 0.03860 3.96690 3.96690 1.46634 0.26236 1.09861 0.40547 71 0.38225 2.81073 1.68372 2.63342 81 A - - > 1.38629 1.38629 1.38629 1.38629 0.01949 3.94778 * 1.46634 0.26236 0.00000 * //