INFERNAL1/a [1.1.4 | Dec 2020] NAME PtaRNA1 ACC RF01811 DESC Plasmid transferred anti-sense RNA STATES 225 NODES 57 CLEN 72 W 89 ALPH RNA RF no CONS yes MAP yes DATE Wed Mar 5 13:54:49 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.105469 CKSUM 3585270671 NULL 0.000 0.000 0.000 0.000 GA 47.00 TC 48.20 NC 46.80 EFP7GF -8.8538 0.71903 ECMLC 0.57418 -9.01995 0.90709 1600000 358602 0.003346 ECMGC 0.43890 -16.37847 -4.03723 1600000 90047 0.004442 ECMLI 0.57572 -6.74747 2.71555 1600000 278772 0.004305 ECMGI 0.48106 -10.71745 -0.06055 1600000 67377 0.005937 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 89 109 -7.018 -7.225 -0.051 -5.639 IL 1 1 2 1 4 2 25 93 113 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 25 92 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - U - - - ML 3 2 3 5 3 2 24 89 109 -8.030 -0.020 -6.684 -1.037 -0.623 -1.776 1.363 D 4 2 3 5 3 0 20 88 108 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 24 91 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 2 23 88 108 -8.030 -0.020 -6.684 -1.608 -1.583 -2.348 1.652 D 7 5 3 8 3 0 20 87 107 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 23 90 110 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - G - - - ML 9 8 3 11 3 1 22 87 107 -8.416 -0.018 -6.734 -1.720 -2.962 1.754 -2.349 D 10 8 3 11 3 0 19 86 106 -5.620 -0.734 -1.403 IL 11 11 3 11 3 1 22 88 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 77 - U - - MR 12 11 3 14 3 1 21 86 106 -8.416 -0.018 -6.734 -1.608 -1.583 -2.348 1.652 D 13 11 3 14 3 0 18 84 104 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 21 87 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 76 - u - - MR 15 14 3 17 3 1 20 85 105 -8.416 -0.018 -6.734 -0.787 0.137 -1.552 0.986 D 16 14 3 17 3 0 18 83 103 -6.390 -1.568 -0.620 IR 17 17 3 17 3 1 20 86 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 75 - C - - MR 18 17 3 20 3 1 19 84 104 -8.416 -0.018 -6.734 -1.901 1.665 -2.730 -1.283 D 19 17 3 20 3 0 17 83 103 -6.390 -1.568 -0.620 IR 20 20 3 20 3 1 19 85 105 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 74 - G - - MR 21 20 3 23 2 1 18 83 103 -8.435 -0.004 -1.720 -2.962 1.754 -2.349 D 22 20 3 23 2 0 17 82 102 -4.432 -0.068 IR 23 23 3 23 2 1 18 84 104 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 8 ] - - - - - - B 24 23 3 25 126 0 17 82 102 [ BEGL 9 ] - - - - - - S 25 24 1 26 4 0 1 49 68 -0.044 -6.869 -6.277 -6.917 [ MATP 10 ] 4 39 c g - - MP 26 25 1 30 6 2 4 49 68 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.610 -3.561 -3.523 0.172 -2.511 -4.129 2.824 -3.206 -3.528 0.393 -3.939 -1.555 1.845 -3.769 0.620 -2.408 ML 27 25 1 30 6 1 1 48 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 1 30 6 1 1 48 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 1 30 6 0 0 45 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 5 38 C G - - MP 32 31 6 36 6 2 3 47 66 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 33 31 6 36 6 1 1 46 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 46 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 6 37 A U - - MP 38 37 6 42 4 2 2 45 64 -7.018 -7.225 -0.051 -5.639 -3.912 -2.913 -3.921 3.405 -4.320 -5.394 -0.012 -3.956 -3.808 0.948 -4.362 -0.370 -0.429 -4.562 -1.953 -2.748 ML 39 37 6 42 4 1 1 45 65 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 4 1 1 45 65 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 41 37 6 42 4 0 0 44 64 -4.568 -4.250 -2.265 -0.520 IL 42 42 5 42 4 1 1 47 66 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 43 43 6 43 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 7 - U - - - ML 44 43 6 46 3 1 1 43 62 -8.030 -0.020 -6.684 -1.608 -1.583 -2.348 1.652 D 45 43 6 46 3 0 0 41 61 -6.174 -1.687 -0.566 IL 46 46 3 46 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 8 - g - - - ML 47 46 3 49 3 1 1 41 61 -8.416 -0.018 -6.734 0.475 -1.521 0.797 -0.931 D 48 46 3 49 3 0 0 40 59 -5.620 -0.734 -1.403 IL 49 49 3 49 3 1 1 42 61 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 36 - g - - MR 50 49 3 52 3 1 1 40 60 -8.416 -0.018 -6.734 -0.313 -1.193 0.873 -0.112 D 51 49 3 52 3 0 0 39 58 -6.390 -1.568 -0.620 IR 52 52 3 52 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 35 - u - - MR 53 52 3 55 5 1 1 39 59 -2.380 -0.341 -6.966 -7.178 -8.070 0.410 -0.438 -1.029 0.529 D 54 52 3 55 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 55 55 3 55 5 1 1 40 59 -1.810 -0.599 -6.839 -5.007 -6.113 0.000 0.000 0.000 0.000 [ MATP 17 ] 9 31 c g - - MP 56 55 3 60 4 2 2 38 57 -7.018 -7.225 -0.051 -5.639 -2.210 -2.237 0.004 1.446 -2.164 -3.180 1.908 -2.575 -2.415 1.271 -2.957 -0.561 1.462 -2.492 -0.153 -1.504 ML 57 55 3 60 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 58 55 3 60 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 59 55 3 60 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 60 60 5 60 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 61 61 6 61 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - U - - - ML 62 61 6 64 3 1 1 35 54 -8.030 -0.020 -6.684 -0.742 -1.006 -0.962 1.258 D 63 61 6 64 3 0 0 34 53 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - U - - - ML 65 64 3 67 3 1 1 34 53 -8.416 -0.018 -6.734 -1.608 -1.583 -2.348 1.652 D 66 64 3 67 3 0 0 33 52 -5.620 -0.734 -1.403 IL 67 67 3 67 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 30 - u - - MR 68 67 3 70 3 1 1 33 52 -8.416 -0.018 -6.734 -0.496 -0.922 -0.294 0.962 D 69 67 3 70 3 0 0 31 50 -6.390 -1.568 -0.620 IR 70 70 3 70 3 1 1 34 53 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 21 ] - 29 - u - - MR 71 70 3 73 5 1 1 32 51 -7.151 -0.038 -6.966 -7.178 -8.070 -0.416 -0.930 0.090 0.732 D 72 70 3 73 5 0 0 31 50 -5.352 -0.707 -2.978 -4.409 -2.404 IR 73 73 3 73 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 12 28 C G - - MP 74 73 3 78 6 2 2 31 50 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 75 73 3 78 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 76 73 3 78 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 77 73 3 78 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 78 78 5 78 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 79 79 6 79 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 13 27 A U - - MP 80 79 6 84 6 2 2 29 48 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.912 -2.913 -3.921 3.405 -4.320 -5.394 -0.012 -3.956 -3.808 0.948 -4.362 -0.370 -0.429 -4.562 -1.953 -2.748 ML 81 79 6 84 6 1 1 28 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 82 79 6 84 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 83 79 6 84 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 84 84 5 84 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 85 85 6 85 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 14 26 C G - - MP 86 85 6 90 6 2 2 27 46 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 87 85 6 90 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 6 90 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 6 90 6 0 0 24 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 15 25 C G - - MP 92 91 6 96 6 2 2 25 44 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.696 -4.615 -4.361 -0.834 -3.047 -4.753 3.594 -3.872 -4.415 -0.613 -4.660 -2.564 0.452 -4.755 -0.757 -3.250 ML 93 91 6 96 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 16 24 U A - - MP 98 97 6 102 4 2 2 23 42 -7.018 -7.225 -0.051 -5.639 -4.346 -4.175 -4.167 -0.459 -3.076 -4.717 1.255 -3.783 -4.171 -0.227 -4.536 -2.069 3.398 -4.492 -0.749 -2.979 ML 99 97 6 102 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 101 97 6 102 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 102 102 5 102 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 103 103 6 103 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 17 - C - - - ML 104 103 6 106 3 1 1 20 39 -8.030 -0.020 -6.684 -1.901 1.665 -2.730 -1.283 D 105 103 6 106 3 0 0 19 38 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 18 - U - - - ML 107 106 3 109 3 1 1 19 37 -8.030 -0.020 -6.684 -1.608 -1.583 -2.348 1.652 D 108 106 3 109 3 0 0 18 37 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 19 - C - - - ML 110 109 3 112 3 1 1 17 36 -8.030 -0.020 -6.684 -0.928 1.247 -1.201 -0.588 D 111 109 3 112 3 0 0 17 36 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 20 - u - - - ML 113 112 3 115 3 1 1 16 35 -8.030 -0.020 -6.684 -0.145 0.248 -1.193 0.556 D 114 112 3 115 3 0 0 16 34 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 21 - A - - - ML 116 115 3 118 3 1 1 15 33 -8.030 -0.020 -6.684 1.211 -1.531 -0.259 -0.990 D 117 115 3 118 3 0 0 15 33 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 22 - g - - - ML 119 118 3 121 3 1 1 13 31 -8.030 -0.020 -6.684 -0.257 -1.068 0.679 0.117 D 120 118 3 121 3 0 0 13 32 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 23 - c - - - ML 122 121 3 124 2 1 1 1 1 * 0.000 -0.822 0.815 -1.627 0.434 D 123 121 3 124 2 0 0 0 0 * 0.000 IL 124 124 3 124 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 34 ] - - - - - - E 125 124 3 -1 0 0 0 0 0 [ BEGR 35 ] - - - - - - S 126 24 1 127 3 0 0 47 65 -8.030 -0.020 -6.684 IL 127 127 2 127 3 1 1 50 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 40 - A - - - ML 128 127 2 130 3 1 1 46 65 -8.030 -0.020 -6.684 1.746 -2.504 -2.123 -2.060 D 129 127 2 130 3 0 0 45 64 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 49 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 41 - A - - - ML 131 130 3 133 5 1 1 45 64 -7.151 -0.038 -6.966 -7.178 -8.070 1.486 -1.322 -1.512 -1.157 D 132 130 3 133 5 0 0 44 63 -4.959 -0.803 -4.221 -2.596 -2.508 IL 133 133 3 133 5 1 1 46 65 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 42 73 G C - - MP 134 133 3 138 6 2 2 44 63 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.269 -2.859 -4.305 0.990 -4.881 -4.611 -0.264 -4.634 -4.093 3.457 -4.467 -0.512 -0.584 -4.155 -2.274 -3.194 ML 135 133 3 138 6 1 1 43 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 136 133 3 138 6 1 1 43 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 137 133 3 138 6 0 0 40 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 138 138 5 138 6 1 1 44 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 139 139 6 139 5 1 1 44 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 43 72 u g - - MP 140 139 6 144 6 2 2 42 61 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.053 -4.045 -3.785 -0.384 -2.561 -4.216 1.725 -3.338 -3.833 -0.182 -4.136 -2.122 1.271 -4.132 2.916 -2.706 ML 141 139 6 144 6 1 1 41 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 6 144 6 1 1 41 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 6 144 6 0 0 38 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 42 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 42 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 44 71 g c - - MP 146 145 6 150 6 2 2 40 59 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.676 -2.499 -3.758 1.021 -4.443 -4.683 0.008 -4.000 -3.622 2.721 -4.086 2.149 -0.269 -3.975 -1.942 -2.593 ML 147 145 6 150 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 6 150 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 40 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 45 70 c g - - MP 152 151 6 156 6 2 2 38 57 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.688 -3.639 -3.578 0.105 -2.524 -4.158 2.932 -3.233 -3.585 0.328 -3.981 -1.629 1.694 -3.834 0.588 -2.458 ML 153 151 6 156 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 38 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 46 69 C G - - MP 158 157 6 162 6 2 2 36 55 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.761 -3.524 -3.670 0.227 -2.716 -4.301 3.092 -3.372 -3.667 1.107 -4.073 -1.377 1.051 -3.920 -0.371 -2.528 ML 159 157 6 162 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 36 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 47 68 G C - - MP 164 163 6 168 6 2 2 34 53 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.874 -3.157 -4.986 0.112 -5.418 -4.745 -0.750 -5.238 -4.413 3.668 -4.741 -0.861 -1.132 -4.554 -2.795 -3.861 ML 165 163 6 168 6 1 1 33 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 6 168 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 30 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 34 52 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 48 67 G C - - MP 170 169 6 174 6 2 2 32 51 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.874 -3.157 -4.986 0.112 -5.418 -4.745 -0.750 -5.238 -4.413 3.668 -4.741 -0.861 -1.132 -4.554 -2.795 -3.861 ML 171 169 6 174 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 6 174 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 32 50 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 49 66 c g - - MP 176 175 6 180 6 2 2 30 49 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.525 -3.211 -3.488 0.503 -2.700 -4.176 2.790 -3.287 -3.490 1.665 -3.927 -1.051 1.140 -3.687 -0.344 -2.358 ML 177 175 6 180 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 26 45 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 50 65 C G - - MP 182 181 6 186 6 2 2 28 47 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.203 -4.169 -3.952 -0.397 -2.710 -4.402 3.368 -3.494 -3.986 -0.172 -4.295 -2.168 0.868 -4.280 0.274 -2.831 ML 183 181 6 186 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 184 181 6 186 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 185 181 6 186 6 0 0 25 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 186 186 5 186 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 187 187 6 187 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 51 64 g c - - MP 188 187 6 192 6 2 2 26 45 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -3.621 -2.701 -3.593 0.862 -3.581 -4.199 0.874 -3.801 -3.667 2.999 -4.061 -0.426 1.159 -3.595 -1.133 -2.526 ML 189 187 6 192 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 190 187 6 192 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 191 187 6 192 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 192 192 5 192 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 193 193 6 193 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 52 63 G C - - MP 194 193 6 198 6 2 2 24 43 -9.135 -9.074 -0.021 -7.851 -8.130 -8.525 -4.874 -3.157 -4.986 0.112 -5.418 -4.745 -0.750 -5.238 -4.413 3.668 -4.741 -0.861 -1.132 -4.554 -2.795 -3.861 ML 195 193 6 198 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 6 198 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 6 198 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 198 198 5 198 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 53 62 c g - - MP 200 199 6 204 4 2 2 22 41 -7.018 -7.225 -0.051 -5.639 -3.041 -2.911 -3.098 0.702 -2.482 -3.861 2.258 -3.028 -3.111 1.555 -3.605 -0.916 1.573 -3.254 0.892 -2.042 ML 201 199 6 204 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 203 199 6 204 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 204 204 5 204 4 1 1 25 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 205 205 6 205 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 54 - u - - - ML 206 205 6 208 3 1 1 19 38 -8.030 -0.020 -6.684 -0.436 0.082 -0.803 0.704 D 207 205 6 208 3 0 0 19 37 -6.174 -1.687 -0.566 IL 208 208 3 208 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 55 - c - - - ML 209 208 3 211 3 1 1 18 36 -8.030 -0.260 -2.633 -0.328 0.265 -0.294 0.246 D 210 208 3 211 3 0 0 17 36 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 56 - g - - - ML 212 211 3 214 3 1 1 17 35 -7.793 -0.023 -6.447 0.120 -0.100 0.132 -0.176 D 213 211 3 214 3 0 0 16 34 -7.476 -2.989 -0.203 IL 214 214 3 214 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 57 - c - - - ML 215 214 3 217 3 1 1 16 33 -2.973 -0.545 -2.417 -0.625 0.723 -1.403 0.404 D 216 214 3 217 3 0 0 16 33 -0.737 -2.989 -1.868 IL 217 217 3 217 3 1 1 16 34 -1.760 -0.571 -4.972 0.000 0.000 0.000 0.000 [ MATL 54 ] 60 - a - - - ML 218 217 3 220 3 1 1 13 32 -7.797 -0.023 -6.451 0.588 -0.885 -0.023 -0.043 D 219 217 3 220 3 0 0 12 31 -7.463 -2.976 -0.206 IL 220 220 3 220 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 61 - c - - - ML 221 220 3 223 2 1 1 1 1 * 0.000 -0.245 0.325 -0.200 0.048 D 222 220 3 223 2 0 0 0 0 * 0.000 IL 223 223 3 223 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 56 ] - - - - - - E 224 223 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME PtaRNA1 ACC RF01811 DESC Plasmid transferred anti-sense RNA LENG 72 MAXL 155 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Mar 5 13:54:49 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 16 EFFN 3.378906 CKSUM 3585270671 STATS LOCAL MSV -8.6957 0.71903 STATS LOCAL VITERBI -9.2110 0.71903 STATS LOCAL FORWARD -3.2409 0.71903 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.76037 1.29396 1.23574 1.33477 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 0.00000 * 1 2.44352 1.93137 2.96536 0.33316 1 U - - : 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 2 3.03253 2.92672 3.56366 0.13938 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 3 3.14007 4.07073 0.09061 3.63907 3 G - - : 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 4 2.66479 0.69473 2.42969 1.06969 4 c - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 5 3.67313 0.15015 3.49487 2.48081 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 6 0.19936 3.33939 2.24129 3.24510 6 A - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 7 3.03253 2.92672 3.56366 0.13938 7 U - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 8 1.03341 2.72992 0.72882 2.33811 8 g - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 9 1.23884 1.29632 1.70336 1.36778 9 a - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 10 2.18648 2.33688 2.17942 0.38868 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 11 3.03253 2.92672 3.56366 0.13938 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 12 3.66629 0.15061 3.49123 2.47953 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 13 0.19941 3.33899 2.24120 3.24456 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 14 3.66438 0.15074 3.49021 2.47917 14 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 15 3.66232 0.15088 3.48911 2.47878 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 16 3.50943 2.32184 3.31534 0.17952 16 U - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 17 3.37729 0.11987 3.94126 2.82350 17 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 18 3.03253 2.92672 3.56366 0.13938 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 19 2.45050 0.34764 2.42265 2.13104 19 C - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 20 1.55112 1.13332 2.37543 0.98603 20 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 21 0.45576 2.74710 1.55509 2.39965 21 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 22 1.68542 2.29945 0.79878 1.33013 22 g - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 23 2.22881 0.69841 2.82239 1.09212 23 c - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 24 0.20361 3.50793 2.15776 3.25245 24 A - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 25 2.76090 3.65659 0.12947 3.43020 25 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 26 2.76271 3.65943 0.12913 3.43340 26 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 27 3.47403 2.58829 3.14996 0.16134 27 U - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 28 2.76887 3.66909 0.12801 3.44431 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 29 1.84050 2.20222 1.26449 0.80224 29 u - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 30 1.92612 2.21631 1.58708 0.61479 30 U - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 31 1.56270 1.86335 0.94442 1.40091 31 g - - > 1.38629 1.38629 1.38629 1.38629 0.33646 1.31257 4.09967 0.56067 0.84589 1.09861 0.40547 32 1.06981 1.72270 2.21523 0.99638 35 u - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 33 1.74491 2.41353 0.65564 1.52911 36 G - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 34 3.45504 2.58514 3.14162 0.16274 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 35 2.75498 3.64736 0.13055 3.41979 38 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 36 1.39726 2.59345 0.52934 2.41948 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 37 0.09662 3.68151 3.36476 3.43122 40 A - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 38 0.25726 2.46859 2.75785 2.54214 41 A - - - 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 39 2.04991 3.21356 0.24113 3.09442 42 G - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 40 3.30112 1.75706 3.12708 0.29201 43 U - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 41 2.11093 3.07465 0.25176 2.89613 44 G - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 42 2.72413 0.61254 2.49305 1.17194 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 43 2.66309 0.48111 1.89453 1.82152 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 44 2.87434 3.67600 0.11509 3.61424 47 G - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 45 2.87354 3.67489 0.11522 3.61274 48 G - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 46 2.45248 0.66994 1.47911 1.74676 49 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 47 3.17966 0.30793 2.97909 1.75681 50 C - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 48 2.14898 2.33302 0.49204 1.74286 51 G - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 49 2.87159 3.67217 0.11553 3.60905 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 50 2.19551 1.10585 1.50785 1.08950 53 u - - < 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 51 1.83150 1.27330 1.99619 0.85786 54 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 52 1.74247 1.11756 1.56442 1.24262 55 c - - _ 1.38629 1.38629 1.38629 1.38629 0.24158 4.09967 1.61931 1.46634 0.26236 1.09861 0.40547 53 1.34530 1.41528 1.21296 1.61261 56 g - - _ 1.38629 1.38629 1.38629 1.38629 0.04135 3.89944 3.89944 1.46634 0.26236 0.15480 1.94201 54 2.03740 0.75792 2.60642 1.11720 57 c - - _ 1.38629 1.38629 1.38629 1.38629 0.41031 1.95637 1.63379 0.59847 0.79774 1.09861 0.40547 55 0.94638 2.09992 1.36614 1.45115 60 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04120 3.90291 3.90291 1.46634 0.26236 2.62277 0.07537 56 1.67477 1.06664 1.48658 1.41741 61 c - - _ 1.38629 1.38629 1.38629 1.38629 0.04120 3.90291 3.90291 1.46634 0.26236 0.15689 1.92962 57 1.57166 1.61749 0.78808 1.97193 62 g - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 58 3.78145 0.13867 3.51669 2.56400 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 59 1.87612 0.54705 2.15864 1.87942 64 C - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 60 2.28779 3.13779 0.22039 2.93895 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 61 1.99429 1.56926 0.60612 2.20522 66 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 62 3.78785 0.13829 3.51978 2.56520 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 63 3.79035 0.13814 3.52099 2.56567 68 C - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 64 2.07769 2.00250 0.43019 2.41463 69 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 65 1.52937 2.66152 0.46147 2.48736 70 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 66 3.11652 0.86653 2.87587 0.73624 71 u - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 67 1.93760 3.28519 0.26009 3.04624 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 68 3.31604 0.27892 3.03392 1.83900 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 69 3.14007 4.07073 0.09061 3.63907 74 G - - : 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 70 3.37729 0.11987 3.94126 2.82350 75 C - - : 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 71 2.19141 1.24144 2.74211 0.62579 76 U - - : 1.38629 1.38629 1.38629 1.38629 0.03372 4.09967 4.09967 1.46634 0.26236 1.09861 0.40547 72 3.03253 2.92672 3.56366 0.13938 77 U - - : 1.38629 1.38629 1.38629 1.38629 0.01700 4.08295 * 1.46634 0.26236 0.00000 * //