INFERNAL1/a [1.1.4 | Dec 2020] NAME rdlD ACC RF01813 DESC rdlD antitoxin STATES 202 NODES 51 CLEN 66 W 82 ALPH RNA RF no CONS yes MAP yes DATE Wed Mar 5 13:54:53 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 52 EFFN 2.599365 CKSUM 836814090 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 51.20 NC 48.50 EFP7GF -9.3566 0.71917 ECMLC 0.58830 -7.86848 2.32121 1600000 481502 0.002492 ECMGC 0.47734 -14.58531 -2.85552 1600000 108075 0.003701 ECMLI 0.60494 -5.47102 3.51468 1600000 275368 0.004358 ECMGI 0.54673 -9.21935 0.38380 1600000 76251 0.005246 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 82 102 -7.199 -7.406 -0.045 -5.820 IL 1 1 2 1 4 1 18 86 106 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 18 85 105 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 18 82 102 -8.199 -0.017 -6.853 -1.046 -1.934 1.429 -0.834 D 4 2 3 5 3 0 13 81 101 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 17 84 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 17 81 101 -8.199 -0.017 -6.853 -1.175 -1.291 -1.624 1.498 D 7 5 3 8 3 0 12 80 99 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 16 83 103 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 16 80 100 -8.199 -0.017 -6.853 -0.533 0.653 -1.328 0.420 D 10 8 3 11 3 0 12 79 98 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 15 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - U - - - ML 12 11 3 14 3 1 15 79 99 -8.199 -0.017 -6.853 -0.698 -0.667 -1.132 1.200 D 13 11 3 14 3 0 11 77 97 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 15 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - g - - - ML 15 14 3 17 3 1 14 78 98 -8.199 -0.017 -6.853 0.562 -1.663 0.796 -1.082 D 16 14 3 17 3 0 10 76 96 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 14 80 100 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - G - - - ML 18 17 3 20 3 1 13 77 96 -8.199 -0.017 -6.853 -2.074 -3.364 1.814 -2.751 D 19 17 3 20 3 0 9 75 95 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 13 79 99 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - g - - - ML 21 20 3 23 3 1 12 76 95 -8.199 -0.017 -6.853 0.034 -1.003 0.387 0.226 D 22 20 3 23 3 0 9 74 94 -6.174 -1.687 -0.566 IL 23 23 3 23 3 1 12 78 98 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - U - - - ML 24 23 3 26 3 1 11 75 94 -8.199 -0.124 -3.659 -0.385 -0.972 -0.691 1.074 D 25 23 3 26 3 0 8 73 93 -6.174 -1.687 -0.566 IL 26 26 3 26 3 1 11 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - U - - - ML 27 26 3 29 3 1 10 74 93 -8.094 -0.019 -6.748 -0.890 -1.101 -1.191 1.354 D 28 26 3 29 3 0 7 73 92 -6.995 -0.714 -1.387 IL 29 29 3 29 3 1 10 76 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 9 73 92 -8.199 -0.017 -6.853 -1.921 1.636 -2.761 -1.055 D 31 29 3 32 3 0 6 71 91 -6.174 -1.687 -0.566 IL 32 32 3 32 3 1 9 75 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - A - - - ML 33 32 3 35 3 1 9 72 91 -8.199 -0.017 -6.853 1.612 -2.147 -1.283 -1.703 D 34 32 3 35 3 0 5 70 90 -6.174 -1.687 -0.566 IL 35 35 3 35 3 1 9 74 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - A - - - ML 36 35 3 38 3 1 8 71 90 -8.199 -0.017 -6.853 1.804 -2.848 -2.433 -2.439 D 37 35 3 38 3 0 5 69 89 -6.174 -1.687 -0.566 IL 38 38 3 38 3 1 8 73 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - G - - - ML 39 38 3 41 3 1 7 70 89 -8.199 -0.201 -2.984 -2.074 -3.364 1.814 -2.751 D 40 38 3 41 3 0 4 68 88 -6.174 -1.687 -0.566 IL 41 41 3 41 3 1 7 72 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 6 69 88 -8.018 -0.020 -6.672 1.381 -1.501 -1.016 -0.869 D 43 41 3 44 3 0 3 67 87 -7.364 -0.519 -1.756 IL 44 44 3 44 3 1 6 71 90 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 5 68 87 -8.199 -0.017 -6.853 -0.597 -1.089 -1.371 1.311 D 46 44 3 47 3 0 2 66 86 -6.174 -1.687 -0.566 IL 47 47 3 47 3 1 5 70 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - U - - - ML 48 47 3 50 3 1 4 67 86 -8.575 -0.142 -3.457 -1.618 -1.404 -2.362 1.633 D 49 47 3 50 3 0 1 65 85 -5.620 -0.734 -1.403 IL 50 50 3 50 3 1 5 67 87 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 69 - U - - MR 51 50 3 53 3 1 5 66 85 -8.451 -0.017 -6.768 -1.678 -1.641 -2.420 1.669 D 52 50 3 53 3 0 0 64 83 -7.240 -2.418 -0.311 IR 53 53 3 53 3 1 4 66 86 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 68 - C - - MR 54 53 3 56 3 1 5 65 84 -8.451 -0.017 -6.768 -1.993 1.685 -2.822 -1.355 D 55 53 3 56 3 0 0 63 83 -7.240 -0.661 -1.470 IR 56 56 3 56 3 1 3 65 85 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 67 - U - - MR 57 56 3 59 3 1 4 64 83 -8.575 -0.016 -6.893 -1.930 -1.850 -2.683 1.724 D 58 56 3 59 3 0 0 62 81 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 2 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 66 - U - - MR 60 59 3 62 5 1 4 63 82 -7.300 -0.034 -7.116 -7.328 -8.220 -1.930 -1.850 -2.683 1.724 D 61 59 3 62 5 0 0 61 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 62 62 3 62 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 65 A U - - MP 63 62 3 67 6 2 5 62 81 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -3.862 -2.808 -3.935 3.354 -4.735 -5.557 -0.444 -4.063 -3.784 1.029 -4.366 0.560 -0.684 -4.565 -2.344 -2.743 ML 64 62 3 67 6 1 1 60 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 1 60 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 0 58 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 64 G U - - MP 69 68 6 73 6 2 5 60 79 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -3.920 -2.612 -4.107 0.927 -5.066 -5.818 -0.621 -4.096 -3.702 0.944 -4.244 3.342 -0.968 -4.938 -2.561 -2.754 ML 70 68 6 73 6 1 1 58 77 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 58 77 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 19 63 C G - - MP 75 74 6 79 6 2 4 58 77 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -5.069 -5.019 -4.668 -1.211 -3.282 -5.011 3.684 -4.144 -4.739 -1.034 -4.939 -2.977 0.174 -5.102 -1.006 -3.563 ML 76 74 6 79 6 1 1 56 75 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 56 75 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 54 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 57 76 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 20 62 C G - - MP 81 80 6 85 6 2 4 56 75 -9.209 -9.148 -0.035 -6.134 -8.204 -8.599 -4.790 -4.781 -4.434 -0.967 -3.071 -4.801 3.596 -3.912 -4.491 -0.774 -4.730 -2.780 0.435 -4.822 -0.408 -3.315 ML 82 80 6 85 6 1 1 54 73 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 54 73 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 52 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 55 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 55 74 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 21 61 C G - - MP 87 86 6 91 6 2 4 54 73 -9.194 -9.133 -0.026 -7.910 -7.103 -8.584 -4.077 -4.029 -3.931 -0.287 -2.833 -4.476 3.375 -2.045 -3.950 -0.083 -4.313 -2.020 0.995 -4.215 -0.525 -2.820 ML 88 86 6 91 6 1 1 52 71 -6.445 -6.791 -1.063 -1.200 -6.641 -4.170 0.145 0.126 -0.531 0.152 MR 89 86 6 91 6 1 1 52 71 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 22 60 C G - - MP 93 92 6 97 6 2 4 52 71 -9.203 -9.142 -0.020 -7.919 -8.199 -8.594 -4.475 -4.422 -4.268 -0.669 -3.097 -4.758 3.553 -2.258 -4.305 -0.476 -4.617 -2.403 0.494 -4.594 -0.810 -3.166 ML 94 92 6 97 6 1 1 50 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 50 69 -7.054 -5.783 -1.692 -5.761 -0.779 -3.975 0.359 -0.535 0.110 -0.077 D 96 92 6 97 6 0 0 48 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 23 59 C G - - MP 99 98 6 103 6 2 3 50 69 -9.203 -9.142 -0.028 -7.919 -6.807 -8.594 -5.041 -4.989 -4.646 -1.183 -3.264 -4.992 3.678 -4.124 -4.715 -1.003 -4.919 -2.946 0.195 -5.077 -0.987 -3.540 ML 100 98 6 103 6 1 1 48 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 48 67 -7.054 -5.783 -1.692 -5.761 -0.779 -3.975 0.359 -0.535 0.110 -0.077 D 102 98 6 103 6 0 0 46 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 49 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 49 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 24 58 G C - - MP 105 104 6 109 6 2 3 48 67 -9.195 -9.134 -0.020 -7.911 -8.191 -8.586 -5.144 -3.288 -5.292 -0.075 -5.797 -4.847 -1.061 -5.556 -4.580 3.721 -4.891 -1.006 -1.436 -4.729 -3.122 -4.163 ML 106 104 6 109 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 47 66 -7.145 -5.874 -1.507 -5.852 -0.870 -4.066 0.159 0.100 -0.515 0.153 D 108 104 6 109 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 47 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 47 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 25 57 u g - - MP 111 110 6 115 4 2 2 46 65 -7.186 -7.393 -0.045 -5.807 -3.405 -3.416 -0.793 0.013 -2.566 -3.989 1.561 -3.206 -3.407 0.172 -3.828 -1.610 0.882 -3.615 2.848 -2.391 ML 112 110 6 115 4 1 1 46 66 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 46 65 -4.886 -3.915 -1.782 -0.715 0.359 -0.535 0.110 -0.077 D 114 110 6 115 4 0 0 45 64 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 47 67 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 46 66 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 26 - u - - - ML 117 116 6 119 3 1 1 43 62 -8.187 -0.018 -6.841 -0.081 -0.560 -0.197 0.589 D 118 116 6 119 3 0 0 42 61 -6.301 -1.814 -0.509 IL 119 119 3 119 3 1 1 45 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 27 - a - - - ML 120 119 3 122 3 1 1 42 61 -8.564 -0.016 -6.881 0.582 -0.381 -0.595 0.102 D 121 119 3 122 3 0 0 41 60 -5.698 -0.684 -1.481 IL 122 122 3 122 3 1 1 43 62 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 56 - U - - MR 123 122 3 125 5 1 1 41 60 -7.300 -0.034 -7.116 -7.328 -8.220 -1.930 -1.850 -2.683 1.724 D 124 122 3 125 5 0 0 40 59 -5.352 -0.707 -2.978 -4.409 -2.404 IR 125 125 3 125 5 1 1 41 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 28 55 u g - - MP 126 125 3 130 6 2 2 40 59 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -2.986 -3.066 -3.029 0.274 -2.407 -3.725 1.806 -2.994 -3.073 0.397 -0.882 -1.380 1.296 -3.229 2.427 -2.101 ML 127 125 3 130 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 3 130 6 1 1 38 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 3 130 6 0 0 36 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 40 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 29 54 G C - - MP 132 131 6 136 6 2 2 38 57 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -4.066 -1.661 -4.047 0.738 -4.823 -4.462 -0.211 -4.526 -4.049 3.357 -4.396 0.506 -0.478 -3.899 -2.181 -2.993 ML 133 131 6 136 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 30 53 U A - - MP 138 137 6 142 6 2 2 36 55 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -4.772 -4.607 -4.543 -0.865 -3.369 -5.052 0.967 -4.102 -4.543 -0.684 -4.887 -2.487 3.547 -4.897 -1.032 -3.300 ML 139 137 6 142 6 1 1 35 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 35 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 36 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 31 52 U A - - MP 144 143 6 148 6 2 2 34 53 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -4.772 -4.607 -4.543 -0.865 -3.369 -5.052 0.967 -4.102 -4.543 -0.684 -4.887 -2.487 3.547 -4.897 -1.032 -3.300 ML 145 143 6 148 6 1 1 33 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 32 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 34 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 32 51 G C - - MP 150 149 6 154 4 2 2 32 51 -7.199 -7.406 -0.082 -4.550 -5.203 -3.317 -5.360 -0.116 -5.878 -4.868 -1.128 -5.624 -4.615 3.731 -4.922 -1.038 -1.502 -4.766 -3.192 -4.229 ML 151 149 6 154 4 1 1 33 52 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 4 1 1 32 51 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 153 149 6 154 4 0 0 31 50 -4.568 -4.250 -2.265 -0.520 IL 154 154 5 154 4 1 1 34 53 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 155 155 6 155 3 1 1 33 52 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 33 - U - - - ML 156 155 6 158 3 1 1 30 48 -8.165 -0.018 -6.819 -0.976 -0.114 -1.739 1.181 D 157 155 6 158 3 0 0 28 47 -6.502 -1.150 -0.894 IL 158 158 3 158 3 1 1 32 51 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 34 - C - - - ML 159 158 3 161 3 1 1 28 47 -8.575 -0.016 -6.893 -2.318 1.749 -3.149 -1.617 D 160 158 3 161 3 0 0 27 46 -5.620 -0.734 -1.403 IL 161 161 3 161 3 1 1 29 48 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 50 - u - - MR 162 161 3 164 3 1 1 27 46 -8.575 -0.016 -6.893 0.196 -0.907 -0.014 0.412 D 163 161 3 164 3 0 0 26 45 -6.390 -1.568 -0.620 IR 164 164 3 164 3 1 1 28 47 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 41 ] - 49 - u - - MR 165 164 3 167 5 1 1 26 45 -3.039 -0.215 -7.116 -7.328 -8.220 0.136 0.013 -0.793 0.395 D 166 164 3 167 5 0 0 25 44 -5.352 -0.707 -2.978 -4.409 -2.404 IR 167 167 3 167 5 1 1 26 45 -2.866 -0.436 -6.377 -3.448 -5.651 0.000 0.000 0.000 0.000 [ MATP 42 ] 35 47 a u - - MP 168 167 3 172 6 2 2 25 44 -9.193 -9.133 -0.020 -7.909 -8.189 -8.584 -2.894 1.666 -3.041 1.930 -3.149 -3.884 1.120 -3.250 -2.997 1.548 -3.474 -0.150 0.497 -3.217 -1.000 -2.043 ML 169 167 3 172 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 3 172 6 1 1 24 43 -7.164 -5.893 -1.315 -5.871 -1.005 -4.085 0.139 0.137 -0.539 0.152 D 171 167 3 172 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 36 46 G C - - MP 174 173 6 178 6 2 2 23 42 -9.209 -9.148 -0.020 -7.924 -8.204 -8.599 -5.203 -3.317 -5.360 -0.116 -5.878 -4.868 -1.128 -5.624 -4.615 3.731 -4.922 -1.038 -1.502 -4.766 -3.192 -4.229 ML 175 173 6 178 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 23 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 23 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 37 45 g c - - MP 180 179 6 184 4 2 2 21 40 -7.199 -7.406 -0.045 -5.820 -3.480 -2.705 -3.590 0.742 -3.749 -4.432 0.320 -3.775 1.853 2.714 -3.983 -0.418 -0.023 -3.790 -1.532 -2.548 ML 181 179 6 184 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 4 1 1 22 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 183 179 6 184 4 0 0 21 39 -4.568 -4.250 -2.265 -0.520 IL 184 184 5 184 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 185 185 6 185 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 38 - U - - - ML 186 185 6 188 3 1 1 18 37 -5.218 -0.052 -6.853 -1.930 -1.850 -2.683 1.724 D 187 185 6 188 3 0 0 17 35 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 20 38 -1.531 -0.735 -4.232 0.000 0.000 0.000 0.000 [ MATL 46 ] 40 - u - - - ML 189 188 3 191 3 1 1 17 35 -8.199 -0.017 -6.853 -0.275 -0.960 0.111 0.660 D 190 188 3 191 3 0 0 16 34 -6.174 -1.687 -0.566 IL 191 191 3 191 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 41 - u - - - ML 192 191 3 194 3 1 1 16 33 -5.273 -0.051 -6.853 -0.002 -0.019 -0.738 0.501 D 193 191 3 194 3 0 0 14 32 -6.174 -1.687 -0.566 IL 194 194 3 194 3 1 1 18 36 -1.528 -0.737 -4.228 0.000 0.000 0.000 0.000 [ MATL 48 ] 43 - a - - - ML 195 194 3 197 3 1 1 13 31 -8.199 -0.017 -6.853 0.866 -1.039 -1.186 0.324 D 196 194 3 197 3 0 0 13 32 -6.174 -1.687 -0.566 IL 197 197 3 197 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 44 - u - - - ML 198 197 3 200 2 1 1 1 1 * 0.000 0.380 -0.956 -1.222 0.811 D 199 197 3 200 2 0 0 0 0 * 0.000 IL 200 200 3 200 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 201 200 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME rdlD ACC RF01813 DESC rdlD antitoxin LENG 66 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Mar 5 13:54:54 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 52 EFFN 3.456299 CKSUM 836814090 STATS LOCAL MSV -8.3501 0.71917 STATS LOCAL VITERBI -9.0643 0.71917 STATS LOCAL FORWARD -3.6258 0.71917 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.67428 1.43550 1.29533 1.20146 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 0.00000 * 1 2.32060 2.95428 0.32316 2.07296 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 2 2.42566 2.47099 2.67106 0.27720 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 3 1.85301 0.86537 2.41866 1.09871 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 4 1.99800 1.91487 2.24695 0.49215 4 U - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 5 0.97487 2.72823 0.77471 2.33730 5 g - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 6 3.16746 4.10097 0.08794 3.66829 6 G - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 7 1.38917 2.16587 1.06703 1.23086 7 g - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 8 1.72717 2.17340 1.89185 0.58406 8 U - - : 1.38629 1.38629 1.38629 1.38629 0.11675 4.11409 2.36601 1.46634 0.26236 1.09861 0.40547 9 2.18911 2.31046 2.31669 0.37082 9 U - - : 1.38629 1.38629 1.38629 1.38629 0.03607 4.03341 4.03341 1.46634 0.26236 0.29878 1.35372 10 3.05953 0.18654 3.64150 2.33253 10 C - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 11 0.21823 3.10950 2.37691 2.83699 11 A - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 12 0.09376 3.71011 3.39096 3.46268 12 A - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 13 3.16746 4.10097 0.08794 3.66829 13 G - - : 1.38629 1.38629 1.38629 1.38629 0.17697 4.11409 1.92515 1.46634 0.26236 1.09861 0.40547 14 0.37376 2.56213 2.17477 2.11125 14 A - - : 1.38629 1.38629 1.38629 1.38629 0.03827 3.97539 3.97539 1.46634 0.26236 0.20218 1.69798 15 1.90880 2.29197 2.46413 0.40708 15 U - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 16 2.77374 2.53450 3.29323 0.19707 16 U - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 17 0.32136 3.32593 1.63953 3.10486 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 18 2.14931 3.35563 0.21427 3.18407 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 19 3.68841 0.14662 3.52081 2.50355 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 20 3.46853 0.20431 3.28399 2.15285 20 C - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 21 2.91206 0.33057 2.72048 1.82464 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04288 4.11409 3.66398 1.46634 0.26236 1.09861 0.40547 22 3.26272 0.21119 3.07833 2.24379 22 C - - < 1.38629 1.38629 1.38629 1.38629 0.03354 4.10476 4.10476 1.46634 0.26236 1.27214 0.32882 23 3.63948 0.15153 3.48304 2.48139 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.04766 4.10476 3.50503 1.46634 0.26236 1.27214 0.32882 24 2.85491 3.64855 0.11810 3.58267 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.03401 4.09112 4.09112 1.46634 0.26236 0.87963 0.53604 25 2.34545 1.75549 2.68770 0.41047 25 U - - < 1.38629 1.38629 1.38629 1.38629 0.03354 4.10476 4.10476 1.46634 0.26236 1.27214 0.32882 26 1.46915 1.80467 1.50122 0.96105 26 u - - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10476 4.10476 1.46634 0.26236 1.27214 0.32882 27 0.96080 1.65433 1.82053 1.33085 27 a - - - 1.38629 1.38629 1.38629 1.38629 0.03354 4.10476 4.10476 1.46634 0.26236 0.82203 0.57900 28 2.59958 1.50212 2.07646 0.54876 28 U - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 29 2.10641 2.95503 0.26662 2.80865 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 30 3.55064 2.35271 3.35857 0.17269 30 U - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 31 3.54882 2.35253 3.35763 0.17281 31 U - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 32 2.89369 3.70363 0.11227 3.64225 32 G - - < 1.38629 1.38629 1.38629 1.38629 0.06026 4.11409 3.16666 1.46634 0.26236 1.09861 0.40547 33 2.24160 1.46314 2.77932 0.51062 33 U - - - 1.38629 1.38629 1.38629 1.38629 0.03412 4.08795 4.08795 1.46634 0.26236 0.57406 0.82835 34 3.41085 0.11606 3.97284 2.85168 34 C - - - 1.38629 1.38629 1.38629 1.38629 0.06005 4.11409 3.17154 1.46634 0.26236 1.09861 0.40547 35 0.62524 1.97713 1.55011 2.16999 35 A - - < 1.38629 1.38629 1.38629 1.38629 0.03412 4.08816 4.08816 1.46634 0.26236 0.57620 0.82561 36 2.88949 3.69775 0.11293 3.63428 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 37 2.24542 2.76096 0.27221 2.67085 37 G - - < 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 38 3.06031 2.95010 3.59215 0.13553 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.06026 3.16666 4.11409 0.65119 0.73694 1.09861 0.40547 39 1.63812 2.14223 1.27140 0.89692 40 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 40 1.40370 1.37741 1.92006 1.03428 41 u - - _ 1.38629 1.38629 1.38629 1.38629 0.05909 3.19323 4.11409 0.66640 0.72063 1.09861 0.40547 41 0.74149 2.21071 2.31504 1.15451 43 a - - _ 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 42 1.10816 2.15534 2.33894 0.78189 44 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 43 1.08504 0.81403 2.56911 1.94884 45 c - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 44 3.74488 0.13914 3.51412 2.57076 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 45 2.38019 0.87099 1.83649 1.11001 47 c - - > 1.38629 1.38629 1.38629 1.38629 0.19263 1.83963 4.11409 0.19436 1.73366 1.09861 0.40547 46 1.29640 1.35283 1.96676 1.11453 49 u - - - 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 47 1.25524 2.08827 1.37061 1.08726 50 u - - - 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 48 3.81876 0.13475 3.55057 2.58487 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 49 0.19597 3.55162 2.18845 3.29165 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 50 0.19570 3.55414 2.18887 3.29439 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 51 3.05557 0.36338 2.77199 1.63454 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 52 1.82857 2.60238 0.39439 2.39507 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 53 3.06031 2.95010 3.59215 0.13553 56 U - - - 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 54 2.21118 2.85961 0.27293 2.63123 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 55 3.69836 0.14543 3.47705 2.52965 58 C - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 56 2.75461 3.65283 0.13025 3.42432 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 57 2.50411 3.25156 0.19548 2.86302 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.05909 4.11409 3.19323 1.46634 0.26236 1.09861 0.40547 58 2.06606 2.89908 0.30071 2.55171 61 G - - > 1.38629 1.38629 1.38629 1.38629 0.03408 4.08909 4.08909 1.46634 0.26236 0.58576 0.81347 59 2.54315 3.44272 0.16246 3.23509 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 60 2.78696 3.69110 0.12546 3.46242 63 G - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 61 3.39343 2.28946 3.15020 0.19572 64 U - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 62 3.32645 2.24490 3.12872 0.20534 65 U - - > 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 63 3.06031 2.95010 3.59215 0.13553 66 U - - : 1.38629 1.38629 1.38629 1.38629 0.03323 4.11409 4.11409 1.46634 0.26236 1.09861 0.40547 64 3.06031 2.95010 3.59215 0.13553 67 U - - : 1.38629 1.38629 1.38629 1.38629 0.13807 4.11409 2.18369 1.46634 0.26236 1.09861 0.40547 65 3.16996 0.14645 3.74274 2.65164 68 C - - : 1.38629 1.38629 1.38629 1.38629 0.03683 4.01285 4.01285 1.46634 0.26236 2.18519 0.11930 66 2.86407 2.78552 3.39047 0.16538 69 U - - : 1.38629 1.38629 1.38629 1.38629 0.01859 3.99461 * 1.46634 0.26236 0.00000 * //