INFERNAL1/a [1.1.4 | Dec 2020] NAME ZEB2_AS1_4 ACC RF01987 DESC ZEB2 antisense RNA 1 conserved region 4 STATES 238 NODES 80 CLEN 78 W 166 ALPH RNA RF no CONS yes MAP yes DATE Fri Feb 28 11:20:27 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 13 EFFN 2.504150 CKSUM 2104706610 NULL 0.000 0.000 0.000 0.000 GA 50.00 TC 52.00 NC 42.20 EFP7GF -9.2862 0.71857 ECMLC 0.50420 -11.40794 1.40436 1600000 766817 0.001565 ECMGC 0.33417 -16.39657 0.00021 1600000 95868 0.004172 ECMLI 0.35986 -11.56316 4.14275 1600000 341818 0.003511 ECMGI 0.40126 -5.26333 7.21567 1600000 59800 0.006689 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 166 252 -7.166 -7.373 -0.046 -5.787 IL 1 1 2 1 4 2 32 168 254 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 32 168 254 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 2 31 166 252 -5.556 -0.063 -5.556 -0.898 -1.990 1.535 -1.670 D 4 2 3 5 3 0 27 163 249 -11.551 -1.585 -0.585 IL 5 5 3 5 3 3 33 172 259 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 2 31 165 251 -5.556 -0.063 -5.556 1.413 -1.572 -0.777 -1.262 D 7 5 3 8 3 0 26 162 248 -11.551 -1.585 -0.585 IL 8 8 3 8 3 3 32 171 258 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - u - - - ML 9 8 3 11 3 2 30 164 249 -5.556 -0.063 -5.556 -0.775 -0.278 -0.575 0.941 D 10 8 3 11 3 0 25 160 246 -11.551 -1.585 -0.585 IL 11 11 3 11 3 3 32 170 256 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 29 162 248 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 13 11 3 14 3 0 25 159 245 -11.551 -1.585 -0.585 IL 14 14 3 14 3 2 31 168 255 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 3 1 28 161 247 -5.556 -0.063 -5.556 -1.251 -0.524 -1.424 1.328 D 16 14 3 17 3 0 24 158 243 -11.551 -1.585 -0.585 IL 17 17 3 17 3 2 30 167 254 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - U - - - ML 18 17 3 20 3 1 28 160 245 -5.556 -0.063 -5.556 -0.651 -1.013 -1.257 1.292 D 19 17 3 20 3 0 23 156 242 -11.551 -1.585 -0.585 IL 20 20 3 20 3 2 29 166 252 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 1 27 158 244 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 22 20 3 23 3 0 22 155 240 -11.551 -1.585 -0.585 IL 23 23 3 23 3 2 29 165 251 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 1 26 157 242 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 25 23 3 26 3 0 22 154 239 -11.551 -1.585 -0.585 IL 26 26 3 26 3 1 28 163 249 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 1 25 156 241 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 28 26 3 29 3 0 21 153 237 -11.551 -1.585 -0.585 IL 29 29 3 29 3 1 27 162 248 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - C - - - ML 30 29 3 32 3 1 25 154 239 -5.556 -0.063 -5.556 -1.883 1.621 -2.079 -1.268 D 31 29 3 32 3 0 20 151 236 -11.551 -1.585 -0.585 IL 32 32 3 32 3 1 26 161 246 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - G - - - ML 33 32 3 35 3 1 24 153 238 -5.556 -0.063 -5.556 -0.898 -1.198 1.080 -0.132 D 34 32 3 35 3 0 19 150 235 -11.551 -1.585 -0.585 IL 35 35 3 35 3 1 26 159 245 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 12 ] 12 - G - - - ML 36 35 3 38 3 1 23 152 237 -5.556 -0.063 -5.556 -0.839 -1.958 1.517 -1.635 D 37 35 3 38 3 0 19 149 233 -11.551 -1.585 -0.585 IL 38 38 3 38 3 1 25 158 244 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 13 ] 13 - C - - - ML 39 38 3 41 3 1 22 151 235 -5.556 -0.063 -5.556 -1.272 1.126 -1.455 0.055 D 40 38 3 41 3 0 18 147 232 -11.551 -1.585 -0.585 IL 41 41 3 41 3 1 24 157 242 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 14 ] 14 - A - - - ML 42 41 3 44 3 1 22 149 234 -5.556 -0.063 -5.556 1.168 -1.332 -0.226 -0.995 D 43 41 3 44 3 0 17 146 230 -11.551 -1.585 -0.585 IL 44 44 3 44 3 1 23 155 241 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 15 ] 15 - U - - - ML 45 44 3 47 3 1 21 148 232 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 46 44 3 47 3 0 16 145 229 -11.551 -1.585 -0.585 IL 47 47 3 47 3 1 23 154 239 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 16 ] 16 - G - - - ML 48 47 3 50 3 1 20 147 231 -5.556 -0.063 -5.556 -1.705 -2.443 1.716 -2.159 D 49 47 3 50 3 0 16 143 227 -11.551 -1.585 -0.585 IL 50 50 3 50 3 1 22 153 238 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 17 ] 17 - G - - - ML 51 50 3 53 3 1 20 145 229 -5.556 -0.063 -5.556 -0.762 -1.914 1.492 -1.588 D 52 50 3 53 3 0 15 142 226 -11.551 -1.585 -0.585 IL 53 53 3 53 3 1 21 152 236 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 18 ] 18 - G - - - ML 54 53 3 56 3 1 19 144 228 -5.556 -0.063 -5.556 -1.705 -2.443 1.716 -2.159 D 55 53 3 56 3 0 14 141 224 -11.551 -1.585 -0.585 IL 56 56 3 56 3 1 21 150 235 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 19 ] 19 - G - - - ML 57 56 3 59 3 1 18 143 226 -5.556 -0.063 -5.556 -1.705 -2.443 1.716 -2.159 D 58 56 3 59 3 0 14 139 223 -11.551 -1.585 -0.585 IL 59 59 3 59 3 1 20 149 233 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 20 ] 20 - U - - - ML 60 59 3 62 3 1 17 141 225 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 61 59 3 62 3 0 13 138 221 -11.551 -1.585 -0.585 IL 62 62 3 62 3 1 19 148 232 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 21 ] 21 - C - - - ML 63 62 3 65 3 1 17 140 223 -5.556 -0.063 -5.556 -1.883 1.621 -2.079 -1.268 D 64 62 3 65 3 0 12 137 220 -11.551 -1.585 -0.585 IL 65 65 3 65 3 1 18 146 230 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 22 ] 22 - U - - - ML 66 65 3 68 3 1 16 139 222 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 67 65 3 68 3 0 12 135 218 -11.551 -1.585 -0.585 IL 68 68 3 68 3 1 18 145 229 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 23 ] 23 - A - - - ML 69 68 3 71 3 1 15 137 220 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 70 68 3 71 3 0 11 134 217 -11.551 -1.585 -0.585 IL 71 71 3 71 3 1 17 144 228 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 24 ] 24 - A - - - ML 72 71 3 74 3 1 15 136 219 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 73 71 3 74 3 0 10 133 215 -11.551 -1.585 -0.585 IL 74 74 3 74 3 1 16 142 226 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 25 ] 25 - G - - - ML 75 74 3 77 3 1 14 135 217 -5.556 -0.063 -5.556 -1.705 -2.443 1.716 -2.159 D 76 74 3 77 3 0 10 131 214 -11.551 -1.585 -0.585 IL 77 77 3 77 3 1 16 141 225 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 26 ] 26 - U - - - ML 78 77 3 80 3 1 13 133 216 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 79 77 3 80 3 0 9 130 212 -11.551 -1.585 -0.585 IL 80 80 3 80 3 1 15 140 223 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 27 ] 27 - U - - - ML 81 80 3 83 3 1 13 132 214 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 82 80 3 83 3 0 8 129 211 -11.551 -1.585 -0.585 IL 83 83 3 83 3 1 14 138 222 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 28 ] 28 - U - - - ML 84 83 3 86 3 1 12 130 213 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 85 83 3 86 3 0 8 127 209 -11.551 -1.585 -0.585 IL 86 86 3 86 3 1 14 137 220 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 29 ] 29 - U - - - ML 87 86 3 89 3 1 11 129 211 -5.556 -0.063 -5.556 -1.126 -1.044 -0.796 1.311 D 88 86 3 89 3 0 7 126 208 -11.551 -1.585 -0.585 IL 89 89 3 89 3 1 13 136 219 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 30 ] 30 - G - - - ML 90 89 3 92 3 1 11 128 210 -5.556 -0.063 -5.556 -0.636 -1.358 1.235 -0.705 D 91 89 3 92 3 0 6 124 206 -11.551 -1.585 -0.585 IL 92 92 3 92 3 1 12 134 217 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 31 ] 31 - G - - - ML 93 92 3 95 3 1 10 126 208 -5.556 -0.063 -5.556 -0.381 -0.878 1.098 -0.869 D 94 92 3 95 3 0 6 123 205 -11.551 -1.585 -0.585 IL 95 95 3 95 3 1 12 133 216 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 32 ] 32 - A - - - ML 96 95 3 98 3 1 9 125 207 -5.556 -0.063 -5.556 1.346 -1.490 -0.606 -1.171 D 97 95 3 98 3 0 5 122 203 -11.551 -1.585 -0.585 IL 98 98 3 98 3 1 11 132 214 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 33 ] 33 - G - - - ML 99 98 3 101 3 1 9 124 205 -5.556 -0.063 -5.556 -0.459 -1.744 1.377 -1.405 D 100 98 3 101 3 0 5 120 201 -11.551 -1.585 -0.585 IL 101 101 3 101 3 1 10 130 213 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 34 ] 34 - U - - - ML 102 101 3 104 3 1 8 122 204 -5.556 -0.063 -5.556 -0.812 -0.470 -0.578 1.028 D 103 101 3 104 3 0 4 119 200 -11.551 -1.585 -0.585 IL 104 104 3 104 3 1 10 129 211 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 35 ] 35 - a - - - ML 105 104 3 107 3 1 7 121 202 -5.556 -0.063 -5.556 0.583 -0.822 0.088 -0.195 D 106 104 3 107 3 0 3 117 198 -11.551 -1.585 -0.585 IL 107 107 3 107 3 1 9 128 210 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 36 ] 36 - U - - - ML 108 107 3 110 3 1 7 120 200 -5.556 -0.113 -4.212 -1.106 -0.008 -1.277 1.090 D 109 107 3 110 3 0 3 116 197 -11.551 -1.585 -0.585 IL 110 110 3 110 3 1 8 126 208 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 37 ] 37 - a - - - ML 111 110 3 113 3 1 6 118 199 -2.157 -0.481 -4.077 0.915 -0.892 -0.873 0.042 D 112 110 3 113 3 0 2 114 194 -12.149 -2.183 -0.359 IL 113 113 3 113 3 1 8 120 201 -0.646 -1.471 -14.648 0.000 0.000 0.000 0.000 [ MATL 38 ] 44 - U - - - ML 114 113 3 116 3 1 6 116 197 -5.453 -0.067 -5.453 -0.531 -0.893 -1.100 1.203 D 115 113 3 116 3 0 2 113 193 -12.606 -2.641 -0.252 IL 116 116 3 116 3 1 7 123 204 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 39 ] 45 - a - - - ML 117 116 3 119 3 1 5 115 195 -5.453 -0.067 -5.453 0.564 -0.775 -0.768 0.434 D 118 116 3 119 3 0 2 113 193 -12.606 -0.558 -1.641 IL 119 119 3 119 3 1 7 122 203 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 40 ] 46 - U - - - ML 120 119 3 122 3 1 5 113 194 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 121 119 3 122 3 0 0 110 190 -11.551 -1.585 -0.585 IL 122 122 3 122 3 1 6 120 201 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 41 ] 47 - U - - - ML 123 122 3 125 3 1 4 112 192 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 124 122 3 125 3 0 0 109 188 -11.551 -1.585 -0.585 IL 125 125 3 125 3 1 5 119 200 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 42 ] 48 - U - - - ML 126 125 3 128 3 1 3 111 190 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 127 125 3 128 3 0 0 107 187 -11.551 -1.585 -0.585 IL 128 128 3 128 3 1 5 117 198 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 43 ] 49 - U - - - ML 129 128 3 131 3 1 3 109 189 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 130 128 3 131 3 0 0 106 185 -11.551 -1.585 -0.585 IL 131 131 3 131 3 1 4 116 197 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 44 ] 50 - U - - - ML 132 131 3 134 3 1 2 108 187 -5.556 -0.128 -3.980 -1.636 -1.314 -1.794 1.579 D 133 131 3 134 3 0 0 105 184 -11.551 -1.585 -0.585 IL 134 134 3 134 3 1 4 115 195 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 45 ] 51 - U - - - ML 135 134 3 137 3 1 2 106 186 -5.494 -0.065 -5.494 -1.520 -1.218 -1.672 1.540 D 136 134 3 137 3 0 0 104 183 -12.282 -0.741 -1.317 IL 137 137 3 137 3 1 3 113 193 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 46 ] 53 - G - - - ML 138 137 3 140 3 1 2 105 184 -5.556 -0.063 -5.556 -1.705 -2.443 1.716 -2.159 D 139 137 3 140 3 0 0 101 180 -11.551 -1.585 -0.585 IL 140 140 3 140 3 1 3 112 192 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 47 ] 54 - A - - - ML 141 140 3 143 3 1 1 103 182 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 142 140 3 143 3 0 0 100 179 -11.551 -1.585 -0.585 IL 143 143 3 143 3 1 3 110 190 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 48 ] 55 - U - - - ML 144 143 3 146 3 1 1 102 181 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 145 143 3 146 3 0 0 99 177 -11.551 -1.585 -0.585 IL 146 146 3 146 3 1 2 109 189 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 49 ] 56 - A - - - ML 147 146 3 149 3 1 1 101 179 -5.556 -0.063 -5.556 1.391 -1.543 -0.718 -1.229 D 148 146 3 149 3 0 0 97 175 -11.551 -1.585 -0.585 IL 149 149 3 149 3 1 2 108 187 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 50 ] 57 - U - - - ML 150 149 3 152 3 1 1 99 177 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 151 149 3 152 3 0 0 96 174 -11.551 -1.585 -0.585 IL 152 152 3 152 3 1 2 106 185 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 51 ] 58 - U - - - ML 153 152 3 155 3 1 1 98 176 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 154 152 3 155 3 0 0 94 172 -11.551 -1.585 -0.585 IL 155 155 3 155 3 1 1 105 184 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 52 ] 59 - G - - - ML 156 155 3 158 3 1 1 96 174 -5.556 -0.063 -5.556 -0.880 -1.980 1.529 -1.659 D 157 155 3 158 3 0 0 93 170 -11.551 -1.585 -0.585 IL 158 158 3 158 3 1 1 103 182 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 53 ] 60 - C - - - ML 159 158 3 161 3 1 1 95 172 -5.556 -0.063 -5.556 -1.883 1.621 -2.079 -1.268 D 160 158 3 161 3 0 0 91 168 -11.551 -1.585 -0.585 IL 161 161 3 161 3 1 1 102 180 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 54 ] 61 - A - - - ML 162 161 3 164 3 1 1 93 171 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 163 161 3 164 3 0 0 90 167 -11.551 -1.585 -0.585 IL 164 164 3 164 3 1 1 100 179 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 55 ] 62 - A - - - ML 165 164 3 167 3 1 1 92 169 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 166 164 3 167 3 0 0 88 165 -11.551 -1.585 -0.585 IL 167 167 3 167 3 1 1 99 177 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 56 ] 63 - U - - - ML 168 167 3 170 3 1 1 90 167 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 169 167 3 170 3 0 0 87 163 -11.551 -1.585 -0.585 IL 170 170 3 170 3 1 1 98 175 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - U - - - ML 171 170 3 173 3 1 1 89 165 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 172 170 3 173 3 0 0 85 161 -11.551 -1.585 -0.585 IL 173 173 3 173 3 1 1 96 174 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 58 ] 65 - A - - - ML 174 173 3 176 3 1 1 87 163 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 175 173 3 176 3 0 0 83 159 -11.551 -1.585 -0.585 IL 176 176 3 176 3 1 1 95 172 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 59 ] 66 - A - - - ML 177 176 3 179 3 1 1 85 162 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 178 176 3 179 3 0 0 82 158 -11.551 -1.585 -0.585 IL 179 179 3 179 3 1 1 93 170 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 60 ] 67 - A - - - ML 180 179 3 182 3 1 1 84 160 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 181 179 3 182 3 0 0 80 156 -11.551 -1.585 -0.585 IL 182 182 3 182 3 1 1 92 168 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 61 ] 68 - G - - - ML 183 182 3 185 3 1 1 82 158 -5.556 -0.063 -5.556 -0.384 -0.938 1.121 -0.898 D 184 182 3 185 3 0 0 79 154 -11.551 -1.585 -0.585 IL 185 185 3 185 3 1 1 90 167 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 62 ] 69 - U - - - ML 186 185 3 188 3 1 1 81 156 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 187 185 3 188 3 0 0 77 152 -11.551 -1.585 -0.585 IL 188 188 3 188 3 1 1 88 165 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 63 ] 70 - A - - - ML 189 188 3 191 3 1 1 79 154 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 190 188 3 191 3 0 0 75 150 -11.551 -1.585 -0.585 IL 191 191 3 191 3 1 1 87 163 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 64 ] 71 - A - - - ML 192 191 3 194 3 1 1 77 152 -5.556 -0.063 -5.556 1.148 -0.486 -1.060 -0.762 D 193 191 3 194 3 0 0 74 148 -11.551 -1.585 -0.585 IL 194 194 3 194 3 1 1 85 161 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 65 ] 72 - A - - - ML 195 194 3 197 3 1 1 76 150 -5.556 -0.063 -5.556 1.399 -1.553 -0.739 -1.241 D 196 194 3 197 3 0 0 72 146 -11.551 -1.585 -0.585 IL 197 197 3 197 3 1 1 84 159 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 66 ] 73 - A - - - ML 198 197 3 200 3 1 1 74 148 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 199 197 3 200 3 0 0 70 144 -11.551 -1.585 -0.585 IL 200 200 3 200 3 1 1 82 157 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 67 ] 74 - U - - - ML 201 200 3 203 3 1 1 72 146 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 202 200 3 203 3 0 0 68 141 -11.551 -1.585 -0.585 IL 203 203 3 203 3 1 1 81 155 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 68 ] 75 - U - - - ML 204 203 3 206 3 1 1 70 144 -5.556 -0.063 -5.556 -1.636 -1.314 -1.794 1.579 D 205 203 3 206 3 0 0 66 139 -11.551 -1.585 -0.585 IL 206 206 3 206 3 1 1 79 153 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 69 ] 76 - A - - - ML 207 206 3 209 3 1 1 69 142 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 208 206 3 209 3 0 0 64 137 -11.551 -1.585 -0.585 IL 209 209 3 209 3 1 1 77 151 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 70 ] 77 - A - - - ML 210 209 3 212 3 1 1 67 139 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 211 209 3 212 3 0 0 62 135 -11.551 -1.585 -0.585 IL 212 212 3 212 3 1 1 76 149 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 71 ] 78 - A - - - ML 213 212 3 215 3 1 1 65 137 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 214 212 3 215 3 0 0 60 132 -11.551 -1.585 -0.585 IL 215 215 3 215 3 1 1 74 147 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 72 ] 79 - A - - - ML 216 215 3 218 3 1 1 63 135 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 217 215 3 218 3 0 0 58 129 -11.551 -1.585 -0.585 IL 218 218 3 218 3 1 1 72 145 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 73 ] 80 - A - - - ML 219 218 3 221 3 1 1 61 132 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 220 218 3 221 3 0 0 56 126 -11.551 -1.585 -0.585 IL 221 221 3 221 3 1 1 70 142 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 74 ] 81 - G - - - ML 222 221 3 224 3 1 1 58 129 -5.556 -0.063 -5.556 -0.440 -1.734 1.368 -1.393 D 223 221 3 224 3 0 0 53 123 -11.551 -1.585 -0.585 IL 224 224 3 224 3 1 1 68 140 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 75 ] 82 - A - - - ML 225 224 3 227 3 1 1 56 126 -5.556 -0.063 -5.556 1.391 -1.543 -0.718 -1.229 D 226 224 3 227 3 0 0 49 119 -11.551 -1.585 -0.585 IL 227 227 3 227 3 1 1 66 137 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 76 ] 83 - A - - - ML 228 227 3 230 3 1 1 53 123 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 229 227 3 230 3 0 0 45 114 -11.551 -1.585 -0.585 IL 230 230 3 230 3 1 1 64 135 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 77 ] 84 - A - - - ML 231 230 3 233 3 1 1 49 118 -5.556 -0.063 -5.556 1.694 -2.148 -1.888 -1.900 D 232 230 3 233 3 0 0 32 101 -11.551 -1.585 -0.585 IL 233 233 3 233 3 1 1 62 131 -0.384 -2.121 -8.028 0.000 0.000 0.000 0.000 [ MATL 78 ] 85 - A - - - ML 234 233 3 236 2 1 1 1 1 * 0.000 1.387 -1.538 -0.707 -1.224 D 235 233 3 236 2 0 0 0 0 * 0.000 IL 236 236 3 236 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 79 ] - - - - - - E 237 236 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME ZEB2_AS1_4 ACC RF01987 DESC ZEB2 antisense RNA 1 conserved region 4 LENG 78 MAXL 166 ALPH RNA RF no MM no CONS yes CS yes MAP no DATE Fri Feb 28 11:20:27 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED NSEQ 13 EFFN 2.504150 STATS LOCAL MSV -8.4498 0.71857 STATS LOCAL VITERBI -9.5614 0.71857 STATS LOCAL FORWARD -3.2185 0.71857 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.05281 1.99438 1.54350 1.19960 1.38629 1.38629 1.38629 1.38629 0.02595 4.96713 3.98195 0.39730 1.11515 0.00000 * 1 2.00889 2.76593 0.32241 2.54407 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 2 0.40688 2.47570 1.92480 2.26078 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 3 1.92320 1.57865 1.78518 0.73430 - u - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 4 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 5 2.25319 1.74919 2.37302 0.46550 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 6 1.83775 2.08824 2.25733 0.49055 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 7 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 8 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 9 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 10 2.69151 0.26238 2.82704 2.26518 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 11 2.00840 2.21643 0.63754 1.47749 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 12 1.96800 2.74315 0.33494 2.51928 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 13 2.26790 0.60584 2.39509 1.34827 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 14 0.57703 2.30949 1.54312 2.07617 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 15 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 16 2.56813 3.07979 0.19678 2.88281 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 17 1.91435 2.71322 0.35231 2.48678 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 18 2.56813 3.07979 0.19678 2.88281 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 19 2.56813 3.07979 0.19678 2.88281 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 20 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 21 2.69151 0.26238 2.82704 2.26518 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 22 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 23 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 24 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 25 2.56813 3.07979 0.19678 2.88281 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 26 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 27 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 28 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 29 2.16645 2.11007 1.93795 0.47773 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 30 1.82707 2.32783 0.53054 1.87523 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 31 1.65040 1.99466 0.62537 1.98849 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 32 0.45305 2.41886 1.80650 2.19767 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 33 1.70446 2.59539 0.43217 2.36006 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 34 1.94927 1.71218 1.78715 0.67390 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 35 0.98230 1.95608 1.32542 1.52119 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 36 2.15319 1.39184 2.27172 0.63086 - U - - : 1.38629 1.38629 1.38629 1.38629 0.07821 3.85103 2.91923 1.46634 0.26236 1.09861 0.40547 37 0.75192 2.00432 1.99173 1.35740 - a - - : 1.38629 1.38629 1.38629 1.38629 0.33341 1.49485 2.82620 1.01935 0.44758 1.51272 0.24886 38 1.75403 2.00532 2.14849 0.55226 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04673 3.77979 3.77979 1.46634 0.26236 1.83010 0.17483 39 0.99558 1.92378 1.91882 1.08572 - a - - : 1.38629 1.38629 1.38629 1.38629 0.04673 3.77979 3.77979 1.46634 0.26236 0.38683 1.13695 40 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 41 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 42 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 43 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 44 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.08841 3.85103 2.75890 1.46634 0.26236 1.09861 0.40547 45 2.44008 2.23079 2.54537 0.31889 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04540 3.80801 3.80801 1.46634 0.26236 0.51342 0.91240 46 2.56813 3.07979 0.19678 2.88281 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 47 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 48 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 49 0.42228 2.45562 1.88376 2.23848 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 50 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 51 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 52 1.99642 2.75899 0.32617 2.53651 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 53 2.69151 0.26238 2.82704 2.26518 - C - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 54 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 55 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 56 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 57 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 58 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 59 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 60 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 61 1.65265 2.03622 0.60919 2.00883 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 62 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 63 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 64 0.59031 1.72316 2.12087 1.91451 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 65 0.41657 2.46293 1.89879 2.24660 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 66 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 67 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 68 2.52033 2.29737 2.62996 0.29174 - U - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 69 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 70 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 71 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 72 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 73 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 74 1.69124 2.58794 0.43794 2.35213 - G - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 75 0.42228 2.45562 1.88376 2.23848 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 76 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 77 0.21188 2.87490 2.69494 2.70350 - A - - : 1.38629 1.38629 1.38629 1.38629 0.04345 3.85103 3.85103 1.46634 0.26236 1.09861 0.40547 78 0.42500 2.45219 1.87667 2.23466 - A - - : 1.38629 1.38629 1.38629 1.38629 * 0.00000 * 0.45905 0.99935 0.00000 * //