INFERNAL1/a [1.1.4 | Dec 2020] NAME MDR-NUDIX ACC RF02918 DESC MDR-NUDIX RNA STATES 192 NODES 51 CLEN 61 W 100 ALPH RNA RF no CONS yes MAP yes DATE Wed Jan 16 12:29:24 2019 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 15 EFFN 3.922119 CKSUM 3345416539 NULL 0.000 0.000 0.000 0.000 GA 54.90 TC 54.90 NC 36.20 EFP7GF -12.0627 0.71928 ECMLC 0.57545 -10.46267 0.38839 1600000 618042 0.001942 ECMGC 0.48047 -15.09279 -3.70604 1600000 95078 0.004207 ECMLI 0.54183 -8.80383 2.22894 1600000 473550 0.002534 ECMGI 0.48260 -11.31735 -0.49217 1600000 74286 0.005385 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 100 150 -7.595 -7.802 -0.034 -6.216 IL 1 1 2 1 4 1 21 102 152 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 21 102 152 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - A - - - ML 3 2 3 5 3 2 20 100 150 -8.574 -0.013 -7.228 1.886 -3.585 -3.106 -3.250 D 4 2 3 5 3 0 17 98 148 -6.174 -1.687 -0.566 IL 5 5 3 5 3 1 20 101 151 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - C - - - ML 6 5 3 8 3 2 19 99 149 -8.574 -0.013 -7.228 -1.954 1.540 -2.842 -0.528 D 7 5 3 8 3 0 17 97 147 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 19 100 150 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - U - - - ML 9 8 3 11 3 1 18 98 148 -8.574 -0.013 -7.228 -1.138 -0.815 -1.358 1.371 D 10 8 3 11 3 0 16 96 146 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 18 99 149 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - A - - - ML 12 11 3 14 3 1 17 97 147 -8.574 -0.013 -7.228 1.886 -3.585 -3.106 -3.250 D 13 11 3 14 3 0 16 95 146 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 18 98 148 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - U - - - ML 15 14 3 17 2 1 16 96 146 -9.062 -0.003 -1.640 -0.679 -2.399 1.519 D 16 14 3 17 2 0 15 95 145 -8.445 -0.004 IL 17 17 3 17 2 1 17 96 147 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 6 ] - - - - - - B 18 17 3 19 69 0 15 95 145 [ BEGL 7 ] - - - - - - S 19 18 1 20 4 0 0 42 70 -0.103 -4.269 -6.604 -7.244 [ MATP 8 ] 6 31 G C - - MP 20 19 1 24 6 2 2 42 70 -9.337 -9.276 -0.018 -8.052 -8.332 -8.727 -5.714 -3.571 -5.977 -0.486 -6.579 -5.054 -1.703 -6.237 -4.906 3.804 -5.186 -1.324 -2.068 -5.088 -3.805 -4.840 ML 21 19 1 24 6 1 1 41 69 -6.912 -7.258 -0.683 -1.666 -7.107 -4.637 1.112 -0.989 -0.735 -0.445 MR 22 19 1 24 6 1 1 40 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 23 19 1 24 6 0 0 38 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 24 24 5 24 6 1 1 42 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 25 25 6 25 5 1 1 42 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 30 A U - - MP 26 25 6 30 6 2 2 40 68 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -4.966 -3.762 -4.819 3.764 -5.854 -7.083 -1.477 -4.781 -4.760 -0.206 -5.359 -1.097 -1.878 -6.015 -3.408 -3.651 ML 27 25 6 30 6 1 1 39 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 28 25 6 30 6 1 1 38 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 29 25 6 30 6 0 0 36 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 30 30 5 30 6 1 1 40 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 31 31 6 31 5 1 1 40 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 29 u a - - MP 32 31 6 36 6 2 2 38 66 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -3.315 -3.201 -3.373 1.925 -2.740 -4.152 2.002 -3.288 -3.376 0.733 -3.876 -1.193 2.105 -3.545 -0.450 -2.311 ML 33 31 6 36 6 1 1 37 64 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 34 31 6 36 6 1 1 36 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 35 31 6 36 6 0 0 34 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 36 36 5 36 6 1 1 38 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 37 37 6 37 5 1 1 38 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 28 c g - - MP 38 37 6 42 6 2 2 36 64 -9.390 -9.329 -0.095 -8.105 -8.385 -4.211 -4.446 -4.398 -4.230 -0.519 -2.979 -4.730 2.949 -3.745 -4.229 -0.339 -4.578 -2.309 2.404 -4.540 -0.622 -3.052 ML 39 37 6 42 6 1 1 35 62 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 40 37 6 42 6 1 1 35 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 41 37 6 42 6 0 0 32 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 42 42 5 42 6 1 1 36 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 43 43 6 43 5 1 1 36 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 27 C G - - MP 44 43 6 48 6 2 2 34 62 -9.313 -9.252 -0.209 -8.029 -8.309 -3.001 -4.412 -4.388 -4.164 -0.535 -2.884 -4.627 3.322 -3.667 -4.177 -0.351 -4.504 -2.341 1.283 -4.488 0.284 -3.003 ML 45 43 6 48 6 1 1 33 60 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 46 43 6 48 6 1 1 32 60 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 47 43 6 48 6 0 0 29 57 -10.095 -8.793 -4.590 -5.272 -5.290 -0.146 IL 48 48 5 48 6 1 1 34 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 49 49 6 49 5 1 1 34 61 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 11 26 g c - - MP 50 49 6 54 4 2 2 33 60 -1.285 -2.592 -1.310 -5.613 -2.810 -1.038 -2.877 1.443 -2.945 -3.633 1.552 -3.184 -3.002 2.429 -3.466 -0.215 0.846 -2.927 -0.718 -1.931 ML 51 49 6 54 4 1 1 29 57 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 52 49 6 54 4 1 1 28 56 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 53 49 6 54 4 0 0 29 56 -3.617 -1.748 -1.133 -2.601 IL 54 54 5 54 4 1 1 32 60 -1.077 -1.216 -3.489 -7.227 0.000 0.000 0.000 0.000 IR 55 55 6 55 3 1 1 28 56 -0.970 -1.065 -6.447 0.000 0.000 0.000 0.000 [ MATL 14 ] 15 - u - - - ML 56 55 6 58 3 1 1 16 34 -8.574 -0.013 -7.228 0.192 -0.237 -0.665 0.463 D 57 55 6 58 3 0 0 16 34 -6.174 -1.687 -0.566 IL 58 58 3 58 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 16 - c - - - ML 59 58 3 61 3 1 1 14 33 -8.574 -0.013 -7.228 0.038 0.421 -0.881 0.126 D 60 58 3 61 3 0 0 15 33 -6.174 -1.687 -0.566 IL 61 61 3 61 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 17 - a - - - ML 62 61 3 64 3 1 1 13 31 -8.574 -0.059 -4.749 0.072 -0.047 -0.035 0.007 D 63 61 3 64 3 0 0 13 32 -6.174 -1.687 -0.566 IL 64 64 3 64 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 18 - u - - - ML 65 64 3 67 2 1 1 1 1 * 0.000 0.250 -0.125 -0.766 0.386 D 66 64 3 67 2 0 0 0 0 * 0.000 IL 67 67 3 67 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 18 ] - - - - - - E 68 67 3 -1 0 0 0 0 0 [ BEGR 19 ] - - - - - - S 69 18 1 70 3 0 3 76 127 -8.574 -0.013 -7.228 IL 70 70 2 70 3 1 2 78 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 32 - C - - - ML 71 70 2 73 3 1 3 76 127 -8.574 -0.013 -7.228 -3.189 1.860 -3.980 -2.343 D 72 70 2 73 3 0 0 74 124 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 2 77 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 33 - U - - - ML 74 73 3 76 3 1 3 75 126 -3.788 -0.119 -7.228 -0.845 -1.406 -1.535 1.444 D 75 73 3 76 3 0 0 73 123 -6.174 -1.687 -0.566 IL 76 76 3 76 3 1 2 76 126 -1.280 -0.862 -4.721 0.000 0.000 0.000 0.000 [ MATL 22 ] 36 - C - - - ML 77 76 3 79 3 1 3 74 124 -8.574 -0.013 -7.228 -3.189 1.860 -3.980 -2.343 D 78 76 3 79 3 0 0 72 122 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 2 75 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 37 - U - - - ML 80 79 3 82 3 1 2 73 123 -8.574 -0.013 -7.228 -2.642 -2.448 -3.414 1.833 D 81 79 3 82 3 0 0 71 121 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 2 74 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 38 - A - - - ML 83 82 3 85 3 1 2 72 122 -8.574 -0.013 -7.228 1.656 -1.574 -2.126 -1.815 D 84 82 3 85 3 0 0 70 120 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 73 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 39 - u - - - ML 86 85 3 88 5 1 2 71 121 -7.638 -0.027 -7.453 -7.666 -8.557 -0.879 0.460 -1.361 0.758 D 87 85 3 88 5 0 0 69 120 -4.959 -0.803 -4.221 -2.596 -2.508 IL 88 88 3 88 5 1 1 71 122 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 40 85 u a - - MP 89 88 3 93 6 2 3 70 120 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -1.513 -2.532 -2.691 0.954 -2.429 -3.522 1.520 -2.857 -2.736 1.662 -3.277 -0.751 2.214 -2.821 0.030 -1.783 ML 90 88 3 93 6 1 1 68 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 91 88 3 93 6 1 1 68 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 92 88 3 93 6 0 0 65 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 93 93 5 93 6 1 1 69 120 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 94 94 6 94 5 1 1 69 120 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 41 84 C G - - MP 95 94 6 99 6 2 3 68 118 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -5.908 -5.927 -5.349 -2.096 -3.837 -5.580 3.820 -4.788 -5.481 -1.988 -5.557 -3.935 -0.505 -5.881 -1.615 -4.289 ML 96 94 6 99 6 1 1 66 117 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 97 94 6 99 6 1 1 66 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 98 94 6 99 6 0 0 63 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 99 99 5 99 6 1 1 67 118 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 100 100 6 100 5 1 1 67 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 42 83 G C - - MP 101 100 6 105 6 2 3 66 116 -5.088 -9.329 -0.059 -8.105 -8.385 -8.780 -5.004 -0.092 -5.064 0.026 -5.963 -4.907 -1.154 -5.530 -4.660 3.621 -4.962 -0.984 -1.430 -4.620 -3.183 -3.982 ML 102 100 6 105 6 1 1 64 115 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 103 100 6 105 6 1 1 64 114 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 104 100 6 105 6 0 0 62 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 105 105 5 105 6 1 1 65 116 -2.994 -3.257 -0.530 -4.912 -5.688 -5.349 0.000 0.000 0.000 0.000 IR 106 106 6 106 5 1 1 65 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 44 82 c g - - MP 107 106 6 111 4 2 2 64 114 -3.466 -7.802 -0.166 -6.216 -1.167 -2.378 -2.418 0.804 -2.177 -3.257 2.411 -2.612 -1.357 0.791 -3.011 -0.807 1.607 -2.565 0.326 -1.568 ML 108 106 6 111 4 1 1 63 113 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 109 106 6 111 4 1 1 62 112 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 110 106 6 111 4 0 0 61 111 -4.568 -4.250 -2.265 -0.520 IL 111 111 5 111 4 1 1 64 114 -1.611 -3.291 -0.857 -5.776 0.000 0.000 0.000 0.000 IR 112 112 6 112 3 1 1 64 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 47 - a - - - ML 113 112 6 115 3 1 1 62 112 -8.574 -0.013 -7.228 0.560 -0.942 0.163 -0.175 D 114 112 6 115 3 0 0 60 110 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 63 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 48 - u - - - ML 116 115 3 118 3 1 1 61 111 -8.574 -0.013 -7.228 0.088 -0.149 -0.730 0.518 D 117 115 3 118 3 0 0 59 109 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 62 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 49 - A - - - ML 119 118 3 121 3 1 1 60 110 -8.574 -0.013 -7.228 1.886 -3.585 -3.106 -3.250 D 120 118 3 121 3 0 0 58 108 -6.174 -1.687 -0.566 IL 121 121 3 121 3 1 1 61 111 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 50 - C - - - ML 122 121 3 124 3 1 1 59 109 -4.800 -0.063 -7.249 -1.347 1.004 -2.219 0.471 D 123 121 3 124 3 0 0 57 108 -5.620 -0.734 -1.403 IL 124 124 3 124 3 1 1 59 109 -2.145 -0.462 -4.384 0.000 0.000 0.000 0.000 [ MATR 34 ] - 81 - a - - MR 125 124 3 127 3 1 1 58 108 -8.931 -0.012 -7.249 0.983 -0.322 -0.721 -0.698 D 126 124 3 127 3 0 0 56 106 -6.390 -1.568 -0.620 IR 127 127 3 127 3 1 1 58 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 35 ] - 80 - U - - MR 128 127 3 130 3 1 1 57 107 -8.931 -0.012 -7.249 -2.642 -2.448 -3.414 1.833 D 129 127 3 130 3 0 0 55 105 -6.390 -1.568 -0.620 IR 130 130 3 130 3 1 1 57 108 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 36 ] - 79 - C - - MR 131 130 3 133 3 1 1 56 106 -8.931 -0.012 -7.249 -0.776 1.461 -2.431 -1.068 D 132 130 3 133 3 0 0 54 104 -6.390 -1.568 -0.620 IR 133 133 3 133 3 1 1 56 107 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 37 ] - 78 - g - - MR 134 133 3 136 3 1 1 55 105 -8.931 -0.012 -7.249 0.717 -2.052 0.817 -1.498 D 135 133 3 136 3 0 0 53 103 -6.390 -1.568 -0.620 IR 136 136 3 136 3 1 1 55 106 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 77 - C - - MR 137 136 3 139 5 1 1 54 104 -7.638 -0.027 -7.453 -7.666 -8.557 -2.471 1.723 -3.320 -1.258 D 138 136 3 139 5 0 0 52 102 -5.352 -0.707 -2.978 -4.409 -2.404 IR 139 139 3 139 5 1 1 54 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 52 76 G C - - MP 140 139 3 144 6 2 2 53 103 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -5.906 -3.668 -6.222 -0.629 -6.837 -5.123 -1.914 -6.472 -5.010 3.826 -5.282 -1.434 -2.278 -5.206 -4.033 -5.083 ML 141 139 3 144 6 1 1 51 102 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 142 139 3 144 6 1 1 51 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 3 144 6 0 0 48 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 52 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 52 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 53 75 U A - - MP 146 145 6 150 6 2 2 51 101 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -5.829 -5.673 -5.472 -1.895 -4.129 -5.881 0.201 -4.917 -5.467 -1.812 -5.762 -3.535 3.769 -5.890 -1.767 -4.038 ML 147 145 6 150 6 1 1 50 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 49 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 6 150 6 0 0 46 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 50 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 50 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 54 74 u a - - MP 152 151 6 156 6 2 2 49 99 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -3.820 -3.806 -3.777 -0.068 -0.770 -4.434 2.534 -3.491 -3.768 0.078 -4.210 -1.809 2.566 -4.011 -0.496 -2.663 ML 153 151 6 156 6 1 1 49 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 6 156 6 1 1 47 98 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 46 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 48 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 48 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 55 73 c g - - MP 158 157 6 162 6 2 2 47 97 -9.390 -9.329 -0.017 -8.105 -8.385 -8.780 -2.754 -2.743 -2.884 0.728 -1.356 -3.721 2.183 -2.950 -2.900 1.460 -3.442 0.175 1.790 -3.027 -0.284 -1.910 ML 159 157 6 162 6 1 1 49 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 46 96 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 45 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 47 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 46 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 56 72 G C - - MP 164 163 6 168 6 2 2 45 95 -9.390 -9.329 -0.094 -4.183 -8.385 -8.780 -3.810 -2.621 -3.720 1.224 -4.437 -4.361 0.217 -4.233 -3.974 3.074 -4.309 0.614 0.533 -3.647 -1.770 -2.675 ML 165 163 6 168 6 1 1 49 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 166 163 6 168 6 1 1 44 94 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 44 94 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 44 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 43 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 57 71 G C - - MP 170 169 6 174 4 2 2 39 89 -7.435 -7.643 -0.038 -6.057 -5.033 -3.270 -5.124 0.496 -5.941 -4.939 -1.124 -5.496 -4.614 3.669 -4.935 -0.951 -1.429 -4.694 -3.175 -3.999 ML 171 169 6 174 4 1 1 50 100 -1.224 -4.636 -1.202 -3.365 -0.304 -1.266 1.102 -0.671 MR 172 169 6 174 4 1 1 43 93 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 173 169 6 174 4 0 0 43 93 -4.568 -4.250 -2.265 -0.520 IL 174 174 5 174 4 1 1 51 102 -0.528 -2.332 -3.314 -7.052 0.000 0.000 0.000 0.000 IR 175 175 6 175 3 1 1 30 58 -0.939 -1.150 -5.184 0.000 0.000 0.000 0.000 [ MATL 45 ] 63 - A - - - ML 176 175 6 178 3 1 1 17 36 -8.574 -0.013 -7.228 1.886 -3.585 -3.106 -3.250 D 177 175 6 178 3 0 0 17 35 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 64 - C - - - ML 179 178 3 181 3 1 1 16 34 -8.574 -0.013 -7.228 -2.069 1.591 -2.951 -0.690 D 180 178 3 181 3 0 0 16 34 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 65 - G - - - ML 182 181 3 184 3 1 1 14 33 -8.574 -0.464 -1.876 -2.789 -4.158 1.892 -3.523 D 183 181 3 184 3 0 0 14 33 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 66 - A - - - ML 185 184 3 187 3 1 1 13 31 -8.128 -0.018 -6.782 1.525 -1.933 -1.011 -1.461 D 186 184 3 187 3 0 0 12 30 -8.422 -0.226 -2.813 IL 187 187 3 187 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 67 - G - - - ML 188 187 3 190 2 1 1 1 1 * 0.000 -1.321 -2.194 1.477 -0.741 D 189 187 3 190 2 0 0 0 0 * 0.000 IL 190 190 3 190 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 50 ] - - - - - - E 191 190 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME MDR-NUDIX ACC RF02918 DESC MDR-NUDIX RNA LENG 61 MAXL 139 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jan 16 12:29:24 2019 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 15 EFFN 7.005615 CKSUM 3345416539 STATS LOCAL MSV -7.9107 0.71928 STATS LOCAL VITERBI -8.7572 0.71928 STATS LOCAL FORWARD -3.6387 0.71928 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.41351 1.23659 1.45796 1.45402 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 0.00000 * 1 0.03705 4.61372 4.24026 4.41871 1 A - - : 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 2 3.33030 0.22643 3.96460 1.91144 2 C - - : 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 3 2.62174 2.10355 2.49028 0.32516 3 U - - : 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 4 0.03705 4.61372 4.24026 4.41871 4 A - - : 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 5 3.08350 1.94281 3.61222 0.24346 5 U - - : 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 6 2.65713 4.08493 0.11287 3.92409 6 G - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 7 0.07713 4.30692 3.11760 4.10489 7 A - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 8 1.20447 1.36160 2.37170 1.04818 8 u - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 9 3.46272 0.62895 3.27350 0.92224 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.14593 4.63514 2.07088 1.46634 0.26236 1.09861 0.40547 10 3.42065 0.33488 3.23092 1.54947 10 C - - < 1.38629 1.38629 1.38629 1.38629 0.38257 4.51142 1.18119 1.46634 0.26236 1.17105 0.37112 11 1.46733 1.60884 0.86119 1.91949 11 g - - < 1.38629 1.38629 1.38629 1.38629 0.64437 0.77599 4.21589 0.79859 0.59777 0.05365 2.95199 12 1.25416 1.55055 1.88352 1.04840 15 u - - _ 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 13 1.39480 0.99752 2.08009 1.35323 16 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 14 1.37781 1.36034 1.36095 1.44868 17 c - - _ 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 15 1.20531 1.45256 1.97675 1.11502 18 u - - _ 1.38629 1.38629 1.38629 1.38629 1.25043 0.76103 1.40067 0.90035 0.52159 1.09861 0.40547 16 2.15750 0.88696 1.48356 1.40383 26 c - - > 1.38629 1.38629 1.38629 1.38629 0.08747 4.36500 2.64451 1.46634 0.26236 0.42051 1.06918 17 1.95004 3.39778 0.24438 3.19187 27 G - - > 1.38629 1.38629 1.38629 1.38629 0.02221 4.51142 4.51142 1.46634 0.26236 0.14319 2.01431 18 0.98150 3.45057 0.58944 3.24717 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 19 1.14016 2.55593 1.25712 1.14527 29 a - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 20 4.49799 3.57921 4.28680 0.05422 30 U - - > 1.38629 1.38629 1.38629 1.38629 0.10578 4.63514 2.40052 1.46634 0.26236 1.09861 0.40547 21 4.44177 0.07392 4.26094 3.09290 31 C - - > 1.38629 1.38629 1.38629 1.38629 0.02135 4.55071 4.55071 1.46634 0.26236 0.19398 1.73545 22 4.36651 0.04607 4.80836 3.72286 32 C - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 23 2.21605 2.77182 2.68549 0.27414 33 U - - - 1.38629 1.38629 1.38629 1.38629 0.10578 2.40052 4.63514 0.76851 0.62307 1.09861 0.40547 24 4.36651 0.04607 4.80836 3.72286 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 25 3.94374 3.71644 4.49205 0.05646 37 U - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 26 0.16161 2.60990 3.37169 3.18561 38 A - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 27 2.34218 0.96329 2.53090 0.81496 39 u - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 28 1.89301 1.74321 1.40567 0.84578 40 u - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 29 4.72200 0.05266 4.64356 3.41806 41 C - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 30 2.16624 4.15551 0.15982 4.05038 42 G - - < 1.38629 1.38629 1.38629 1.38629 0.08577 2.62425 4.63514 0.24911 1.51182 1.09861 0.40547 31 1.96980 0.88102 1.89235 1.21930 44 c - - < 1.38629 1.38629 1.38629 1.38629 0.12078 2.26269 4.63514 0.52548 0.89471 1.09861 0.40547 32 0.96294 2.16267 1.21290 1.58045 47 a - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 33 1.34144 1.47528 1.93609 1.00635 48 u - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 34 0.03705 4.61371 4.24026 4.41871 49 A - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 35 2.81117 0.57808 3.47321 1.05591 50 C - - - 1.38629 1.38629 1.38629 1.38629 0.06239 2.98020 4.63514 0.34631 1.22858 1.09861 0.40547 36 3.52845 4.54167 0.05226 4.51795 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 37 4.80683 3.48481 4.73731 0.04877 53 U - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 38 3.15647 0.83941 2.93668 0.74989 54 u - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 39 2.25049 1.07698 1.32622 1.24288 55 c - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 40 1.87691 2.79763 0.39718 2.17357 56 G - - < 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 41 2.45959 3.83329 0.14298 3.64512 57 G - - < 1.38629 1.38629 1.38629 1.38629 0.14516 2.07615 4.63514 1.60303 0.22475 1.09861 0.40547 42 0.03705 4.61372 4.24026 4.41871 63 A - - _ 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 43 3.43164 0.19554 4.04830 2.05711 64 C - - _ 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 44 3.98125 4.99661 0.03730 4.49252 65 G - - _ 1.38629 1.38629 1.38629 1.38629 0.39712 4.63514 1.14557 1.46634 0.26236 1.09861 0.40547 45 0.22652 3.19194 2.22207 2.93325 66 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02846 4.26648 4.26648 1.46634 0.26236 0.05924 2.85566 46 2.80577 3.45432 0.26017 1.98770 67 G - - _ 1.38629 1.38629 1.38629 1.38629 0.14516 2.07615 4.63514 0.74754 0.64156 1.09861 0.40547 47 4.03733 0.14991 3.81475 2.30731 71 C - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 48 2.32868 0.55095 2.60779 1.37643 72 C - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 49 1.31028 1.66763 1.03426 1.68161 73 g - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 50 0.72205 3.10881 0.87782 2.92063 74 a - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 51 0.05598 4.95365 3.30831 4.52749 75 A - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 52 4.66365 0.06374 4.44378 3.20489 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 53 3.77152 0.11896 4.31389 2.58017 77 C - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 54 0.82658 3.39013 0.73005 3.06042 78 g - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 55 2.10287 0.24471 3.71736 2.64976 79 C - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 56 3.94374 3.71644 4.49205 0.05646 80 U - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 57 0.60926 1.57551 1.97383 2.20346 81 A - - - 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 58 1.33508 2.21184 0.71895 1.96538 82 g - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 59 4.21468 0.09394 4.00053 2.87214 83 C - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 60 3.68883 4.78566 0.04532 4.51399 84 G - - > 1.38629 1.38629 1.38629 1.38629 0.01960 4.63514 4.63514 1.46634 0.26236 1.09861 0.40547 61 0.94857 1.50419 1.46949 1.82969 85 a - - > 1.38629 1.38629 1.38629 1.38629 0.00985 4.62539 * 1.46634 0.26236 0.00000 * //