INFERNAL1/a [1.1.4 | Dec 2020] NAME CyVA-1 ACC RF02965 DESC CyVA-1 RNA STATES 240 NODES 65 CLEN 77 W 124 ALPH RNA RF no CONS yes MAP yes DATE Thu Dec 13 11:30:51 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 123 EFFN 13.704620 CKSUM 1990293868 NULL 0.000 0.000 0.000 0.000 GA 41.40 TC 41.40 NC 39.40 EFP7GF -20.5590 0.71961 ECMLC 0.71461 -5.50174 2.29031 1600000 314384 0.003817 ECMGC 0.40563 -17.36883 -4.67706 1600000 68845 0.005810 ECMLI 0.65879 -3.86193 4.18083 1600000 240038 0.004999 ECMGI 0.45626 -12.66007 -1.83304 1600000 55905 0.007155 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 1 1 124 184 -10.294 -10.233 -0.035 -9.010 -5.692 -9.685 IL 1 1 2 1 6 3 32 125 186 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 3 32 125 185 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 97 g c - - MP 3 2 3 7 6 6 36 124 184 -10.268 -10.207 -0.009 -8.984 -9.264 -9.659 -1.415 -2.293 -1.668 1.270 -0.983 -2.571 0.943 -1.563 -2.077 2.065 -2.615 -0.021 1.197 -1.844 0.044 -0.763 ML 4 2 3 7 6 2 30 122 182 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 3 30 122 182 -7.540 -6.269 -0.891 -6.247 -1.381 -4.461 -0.194 0.656 -0.908 0.024 D 6 2 3 7 6 0 25 117 178 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 7 7 5 7 6 3 31 123 184 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 3 32 123 183 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 96 c g - - MP 9 8 6 13 6 6 34 122 182 -10.294 -10.233 -0.009 -9.010 -9.290 -9.685 -1.851 -2.059 -2.315 1.177 -1.869 -2.593 1.947 -2.663 -2.048 1.045 -2.956 -0.413 1.583 -2.055 0.757 -1.138 ML 10 8 6 13 6 2 29 120 180 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 2 29 119 180 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 24 116 176 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 13 13 5 13 6 3 31 121 182 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 3 31 121 181 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 95 a u - - MP 15 14 6 19 6 6 32 120 180 -5.444 -10.233 -0.042 -9.010 -9.290 -9.685 -3.329 -1.452 -3.402 2.568 -3.700 -4.158 0.025 -2.907 -2.337 2.252 -2.153 0.267 0.250 -3.434 -1.385 -2.553 ML 16 14 6 19 6 2 28 118 178 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 2 28 117 178 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 24 114 175 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 3 30 119 179 -3.160 -3.423 -0.462 -5.078 -5.854 -5.515 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 3 30 119 179 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 5 94 c g - - MP 21 20 6 25 6 6 30 118 178 -10.294 -10.233 -0.009 -9.010 -9.290 -9.685 -2.935 -3.621 -2.421 0.571 -3.215 -4.597 2.861 -3.731 -3.739 0.917 -4.284 0.193 1.389 -3.904 -0.664 -2.716 ML 22 20 6 25 6 2 27 116 176 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 2 27 116 176 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 23 112 173 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 2 29 117 178 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 2 29 117 177 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 93 c g - - MP 27 26 6 31 6 5 28 116 176 -10.294 -10.233 -0.009 -9.010 -9.290 -9.685 -4.979 -4.737 -4.936 -0.621 -3.783 -5.694 2.799 -4.462 -4.827 -0.108 -5.305 -1.786 2.567 -5.146 -0.263 -3.573 ML 28 26 6 31 6 2 26 114 175 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 2 25 114 174 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 23 111 172 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 2 27 115 176 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 2 27 115 175 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 7 92 G C - - MP 33 32 6 37 4 4 26 114 174 -9.067 -9.274 -0.012 -7.688 -4.649 -3.280 -4.480 1.841 -5.585 -5.071 -0.216 -5.142 -4.869 3.282 -5.129 -0.810 -0.935 -4.343 -1.910 -3.437 ML 34 32 6 37 4 1 25 113 173 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 24 112 173 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 23 111 171 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 2 26 114 174 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 2 26 113 174 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 8 - G - - - ML 39 38 6 41 3 3 24 112 172 -3.078 -0.186 -8.656 -1.527 -1.215 1.487 -1.252 D 40 38 6 41 3 0 22 110 170 -6.174 -1.687 -0.566 IL 41 41 3 41 3 2 24 112 172 -2.525 -0.323 -5.226 0.000 0.000 0.000 0.000 [ MATL 8 ] 10 - a - - - ML 42 41 3 44 3 2 23 111 171 -10.319 -0.015 -6.661 0.535 -0.026 -0.678 -0.083 D 43 41 3 44 3 0 22 109 170 -5.620 -0.734 -1.403 IL 44 44 3 44 3 1 23 111 172 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 91 - A - - MR 45 44 3 47 3 1 22 110 170 -5.620 -0.105 -4.335 1.591 -1.559 -0.987 -2.806 D 46 44 3 47 3 0 21 108 169 -6.700 -1.878 -0.477 IR 47 47 3 47 3 1 23 110 170 -2.244 -0.426 -4.483 0.000 0.000 0.000 0.000 [ MATR 10 ] - 89 - g - - MR 48 47 3 50 2 1 21 109 169 -10.513 -0.001 0.583 -1.078 0.741 -1.484 D 49 47 3 50 2 0 20 108 168 -5.935 -0.024 IR 50 50 3 50 2 1 22 109 170 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 11 ] - - - - - - B 51 50 3 52 126 0 20 108 168 [ BEGL 12 ] - - - - - - S 52 51 1 53 4 0 0 39 58 -0.054 -5.114 -7.668 -8.308 [ MATP 13 ] 11 37 a u - - MP 53 52 1 57 6 2 2 39 58 -10.261 -10.200 -0.009 -8.976 -9.256 -9.651 -2.595 -2.340 -2.764 2.032 -2.441 -3.598 1.197 -3.081 -2.841 1.485 -3.394 0.027 1.834 -2.382 -0.843 -1.503 ML 54 52 1 57 6 1 1 38 57 -7.009 -7.355 -0.628 -1.764 -7.205 -4.734 -0.331 -0.585 -0.967 1.019 MR 55 52 1 57 6 1 1 38 57 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 1 57 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 1 38 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 12 36 G C - - MP 59 58 6 63 6 2 2 37 56 -10.294 -10.233 -0.009 -9.010 -9.290 -9.685 -4.305 -3.007 -4.207 0.841 -4.762 -4.273 1.846 -4.708 -4.525 3.028 -3.345 -0.920 -0.045 -3.010 -2.149 -3.183 ML 60 58 6 63 6 1 1 36 55 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 61 58 6 63 6 1 1 36 55 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 0 34 53 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 36 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 13 35 g c - - MP 65 64 6 69 6 2 2 35 54 -10.294 -10.233 -0.009 -9.010 -9.290 -9.685 -4.659 -0.213 -4.503 2.370 -5.633 -5.147 -0.254 -5.149 -4.875 2.872 -5.155 -0.328 -0.995 -4.398 -2.736 -3.452 ML 66 64 6 69 6 1 1 34 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 67 64 6 69 6 1 1 34 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 68 64 6 69 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 69 69 5 69 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 70 70 6 70 5 1 1 35 54 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 14 34 G C - - MP 71 70 6 75 4 2 2 33 52 -9.067 -4.415 -0.079 -7.688 -4.576 -3.233 -4.409 1.891 -5.486 -5.017 0.594 -5.069 -3.381 3.101 -5.075 -0.099 -0.859 -4.278 -2.597 -3.369 ML 72 70 6 75 4 1 1 34 53 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 73 70 6 75 4 1 1 33 53 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 74 70 6 75 4 0 0 32 52 -4.568 -4.250 -2.265 -0.520 IL 75 75 5 75 4 1 1 35 55 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 76 76 6 76 3 1 1 34 54 -1.375 -0.782 -4.923 0.000 0.000 0.000 0.000 [ MATL 17 ] 15 - g - - - ML 77 76 6 79 3 1 1 29 48 -1.615 -0.575 -8.656 0.477 -0.735 0.485 -0.718 D 78 76 6 79 3 0 0 27 46 -6.174 -1.687 -0.566 IL 79 79 3 79 3 1 1 29 47 -3.478 -0.158 -6.178 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - G - - - ML 80 79 3 82 3 1 1 27 46 -10.002 -0.005 -8.656 -1.373 -2.010 1.276 -0.084 D 81 79 3 82 3 0 0 27 46 -6.174 -1.687 -0.566 IL 82 82 3 82 3 1 1 31 50 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - U - - - ML 83 82 3 85 3 1 1 26 45 -10.002 -0.005 -8.656 -3.734 -2.350 -4.470 1.881 D 84 82 3 85 3 0 0 26 45 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 30 49 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - U - - - ML 86 85 3 88 3 1 1 25 44 -10.002 -0.005 -8.656 -3.348 -3.190 -3.288 1.884 D 87 85 3 88 3 0 0 25 44 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - U - - - ML 89 88 3 91 3 1 1 24 43 -10.002 -0.005 -8.656 0.054 -1.548 -1.045 1.094 D 90 88 3 91 3 0 0 24 43 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 28 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - U - - - ML 92 91 3 94 3 1 1 23 42 -10.002 -0.005 -8.656 -0.948 -0.977 -2.550 1.487 D 93 91 3 94 3 0 0 23 42 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 27 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - a - - - ML 95 94 3 97 3 1 1 22 40 -10.002 -0.005 -8.656 0.893 -2.677 0.597 -1.080 D 96 94 3 97 3 0 0 22 40 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 26 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - C - - - ML 98 97 3 100 3 1 1 21 39 -10.002 -0.005 -8.656 -2.530 1.460 -2.331 -0.188 D 99 97 3 100 3 0 0 21 39 -6.174 -1.687 -0.566 IL 100 100 3 100 3 1 1 25 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - C - - - ML 101 100 3 103 3 1 1 20 38 -10.002 -0.005 -8.656 -2.064 1.209 -3.044 0.408 D 102 100 3 103 3 0 0 20 38 -6.174 -1.687 -0.566 IL 103 103 3 103 3 1 1 24 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 25 - G - - - ML 104 103 3 106 3 1 1 18 37 -10.002 -0.005 -8.656 -3.234 -3.891 1.918 -4.384 D 105 103 3 106 3 0 0 19 37 -6.174 -1.687 -0.566 IL 106 106 3 106 3 1 1 23 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 26 - U - - - ML 107 106 3 109 3 1 1 17 36 -10.002 -0.005 -8.656 -2.160 0.221 -3.448 1.333 D 108 106 3 109 3 0 0 18 36 -6.174 -1.687 -0.566 IL 109 109 3 109 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 27 - U - - - ML 110 109 3 112 3 1 1 16 35 -10.002 -0.005 -8.656 -1.234 -3.088 -3.893 1.761 D 111 109 3 112 3 0 0 17 35 -6.174 -1.687 -0.566 IL 112 112 3 112 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 28 - U - - - ML 113 112 3 115 3 1 1 15 33 -10.002 -0.005 -8.656 -1.241 -1.962 0.217 1.109 D 114 112 3 115 3 0 0 16 34 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 29 - u - - - ML 116 115 3 118 3 1 1 13 32 -10.002 -0.015 -6.749 -0.238 -0.187 -0.720 0.737 D 117 115 3 118 3 0 0 14 33 -6.174 -1.687 -0.566 IL 118 118 3 118 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - g - - - ML 119 118 3 121 3 1 1 12 30 -9.992 -0.036 -5.396 -0.176 -0.412 0.825 -0.758 D 120 118 3 121 3 0 0 13 31 -6.506 -1.145 -0.898 IL 121 121 3 121 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - a - - - ML 122 121 3 124 2 1 1 1 1 * 0.000 0.196 -0.029 -0.306 0.091 D 123 121 3 124 2 0 0 0 0 * 0.000 IL 124 124 3 124 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 33 ] - - - - - - E 125 124 3 -1 0 0 0 0 0 [ BEGR 34 ] - - - - - - S 126 51 1 127 3 0 2 83 144 -10.002 -0.005 -8.656 IL 127 127 2 127 3 1 1 85 145 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - U - - - ML 128 127 2 130 3 1 2 83 144 -10.002 -0.005 -8.656 -1.467 -0.597 -0.660 1.229 D 129 127 2 130 3 0 0 81 142 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 84 144 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - U - - - ML 131 130 3 133 3 1 2 82 143 -10.002 -0.005 -8.656 -0.104 -1.006 -1.160 1.087 D 132 130 3 133 3 0 0 80 141 -6.174 -1.687 -0.566 IL 133 133 3 133 3 1 1 83 143 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - a - - - ML 134 133 3 136 3 1 1 81 142 -10.002 -0.028 -5.753 0.622 -1.093 0.080 -0.096 D 135 133 3 136 3 0 0 79 140 -6.174 -1.687 -0.566 IL 136 136 3 136 3 1 1 82 142 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - u - - - ML 137 136 3 139 5 1 1 80 141 -2.321 -0.353 -6.184 -8.990 -9.881 -0.073 -0.084 -0.372 0.415 D 138 136 3 139 5 0 0 78 139 -5.385 -0.552 -4.646 -3.021 -2.934 IL 139 139 3 139 5 1 1 80 141 -3.121 -0.229 -5.770 -7.602 -6.876 0.000 0.000 0.000 0.000 [ MATP 39 ] 44 88 u a - - MP 140 139 3 144 6 2 2 79 140 -10.281 -10.221 -0.009 -8.997 -9.277 -9.672 -3.515 -3.521 -3.644 1.218 -3.162 -4.489 2.198 -3.663 -3.643 1.205 -4.190 -1.079 2.207 -2.290 -0.510 -2.639 ML 141 139 3 144 6 1 1 77 138 -6.586 -6.932 -0.924 -1.341 -6.782 -4.312 0.183 -0.306 0.052 0.028 MR 142 139 3 144 6 1 1 77 137 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 143 139 3 144 6 0 0 73 133 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 144 144 5 144 6 1 1 78 139 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 145 145 6 145 5 1 1 78 139 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 45 87 G C - - MP 146 145 6 150 6 2 2 77 138 -6.081 -10.233 -0.043 -6.550 -9.290 -9.685 -2.809 -2.260 -2.795 1.285 -3.174 -4.539 0.386 -4.368 -4.115 3.003 -4.506 0.346 0.617 -3.809 -1.205 -2.917 ML 147 145 6 150 6 1 1 75 136 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 148 145 6 150 6 1 1 75 135 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 149 145 6 150 6 0 0 71 131 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 150 150 5 150 6 1 1 76 137 -2.971 -3.234 -0.540 -4.889 -5.666 -5.326 0.000 0.000 0.000 0.000 IR 151 151 6 151 5 1 1 76 137 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 47 86 c g - - MP 152 151 6 156 6 2 2 75 136 -10.281 -10.221 -0.016 -8.997 -7.266 -9.672 -2.922 -2.528 -3.089 0.865 -2.825 -3.940 2.387 -2.506 -1.959 0.893 -3.682 -0.893 1.914 -3.237 0.405 -2.221 ML 153 151 6 156 6 1 1 73 134 -6.588 -6.935 -0.921 -1.343 -6.784 -4.314 0.519 -0.514 -0.457 0.187 MR 154 151 6 156 6 1 1 73 133 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 6 156 6 0 0 69 129 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 74 135 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 74 135 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 48 85 c g - - MP 158 157 6 162 6 2 2 73 134 -10.287 -10.226 -0.015 -7.431 -9.283 -9.678 -3.484 -3.517 -3.618 2.062 -1.139 -4.466 2.142 -3.638 -3.614 0.653 -4.164 -1.039 1.756 -3.772 -0.392 -2.620 ML 159 157 6 162 6 1 1 71 132 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 71 131 -7.161 -5.890 -1.320 -5.868 -1.002 -4.081 0.718 -0.626 -0.336 -0.129 D 161 157 6 162 6 0 0 67 128 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 72 133 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 72 133 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 49 84 c g - - MP 164 163 6 168 6 2 2 71 132 -10.288 -10.228 -0.009 -9.004 -9.284 -9.679 -0.701 -2.429 -2.421 0.838 -2.379 -3.273 1.929 -2.750 -1.046 1.354 -3.056 -0.628 1.536 -2.563 0.673 -0.996 ML 165 163 6 168 6 1 1 69 130 -6.408 -6.754 -1.104 -1.163 -6.604 -4.134 0.672 -0.593 -0.298 -0.104 MR 166 163 6 168 6 1 1 69 129 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 65 126 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 70 131 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 70 131 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 50 83 a u - - MP 170 169 6 174 6 2 2 69 130 -10.294 -10.233 -0.009 -9.010 -9.290 -9.685 -0.836 -1.646 -1.226 1.889 -2.297 -2.519 1.612 -2.656 -2.372 1.263 -2.441 -0.783 1.484 -2.135 -0.566 -1.575 ML 171 169 6 174 6 1 1 67 128 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 6 1 1 67 127 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 6 174 6 0 0 64 124 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 68 129 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 68 129 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 51 82 C G - - MP 176 175 6 180 6 2 2 67 128 -10.294 -10.233 -0.088 -4.188 -9.290 -9.685 -5.347 -5.210 -5.221 -1.196 -0.894 -5.841 3.062 -4.741 -5.166 -1.002 -5.580 -2.969 2.400 -3.073 -1.319 -3.952 ML 177 175 6 180 6 1 1 66 126 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 65 126 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 63 123 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 66 127 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 66 127 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 52 81 c g - - MP 182 181 6 186 4 2 2 65 126 -8.958 -9.165 -0.013 -7.579 -1.308 -1.892 -2.601 0.428 -0.769 -3.023 2.810 -2.338 -2.654 0.635 -3.223 -1.166 1.155 -2.744 -0.294 -1.186 ML 183 181 6 186 4 1 1 64 125 -4.891 -5.073 -0.209 -3.803 1.516 -1.684 -1.384 -1.167 MR 184 181 6 186 4 1 1 63 124 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 185 181 6 186 4 0 0 62 123 -4.568 -4.250 -2.265 -0.520 IL 186 186 5 186 4 1 1 65 126 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 187 187 6 187 3 1 1 65 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 53 - G - - - ML 188 187 6 190 3 1 1 63 124 -10.002 -0.014 -6.884 -0.805 -0.921 1.391 -1.850 D 189 187 6 190 3 0 0 61 121 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 64 124 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 54 - A - - - ML 191 190 3 193 3 1 1 62 123 -9.993 -0.005 -8.647 1.592 -1.974 -2.151 -0.983 D 192 190 3 193 3 0 0 60 120 -6.470 -1.983 -0.443 IL 193 193 3 193 3 1 1 63 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 55 - A - - - ML 194 193 3 196 3 1 1 61 122 -9.993 -0.005 -8.647 1.976 -5.841 -5.255 -5.490 D 195 193 3 196 3 0 0 59 119 -6.470 -1.983 -0.443 IL 196 196 3 196 3 1 1 62 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 56 - G - - - ML 197 196 3 199 3 1 1 60 121 -4.744 -0.059 -8.647 -2.355 -3.781 1.744 -1.391 D 198 196 3 199 3 0 0 58 119 -6.470 -1.190 -0.861 IL 199 199 3 199 3 1 1 60 121 -1.869 -0.548 -4.569 0.000 0.000 0.000 0.000 [ MATL 51 ] 58 - G - - - ML 200 199 3 202 3 1 1 59 120 -10.002 -0.005 -8.656 -0.443 -1.130 1.334 -1.802 D 201 199 3 202 3 0 0 57 117 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 60 120 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 59 - A - - - ML 203 202 3 205 3 1 1 58 119 -10.002 -0.005 -8.656 1.686 -1.972 -1.299 -3.039 D 204 202 3 205 3 0 0 56 116 -6.174 -1.687 -0.566 IL 205 205 3 205 3 1 1 59 119 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 60 - G - - - ML 206 205 3 208 3 1 1 57 118 -10.002 -0.005 -8.656 -0.767 -4.294 1.718 -3.813 D 207 205 3 208 3 0 0 55 115 -6.174 -1.687 -0.566 IL 208 208 3 208 3 1 1 58 118 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 61 - A - - - ML 209 208 3 211 3 1 1 56 117 -10.002 -0.005 -8.656 1.938 -4.994 -3.318 -4.797 D 210 208 3 211 3 0 0 54 114 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 57 117 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 62 - g - - - ML 212 211 3 214 3 1 1 55 116 -10.002 -0.005 -8.656 0.917 -4.118 0.987 -3.781 D 213 211 3 214 3 0 0 53 113 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 56 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 63 - C - - - ML 215 214 3 217 3 1 1 54 115 -10.002 -0.005 -8.656 -2.764 1.589 -2.054 -0.727 D 216 214 3 217 3 0 0 52 112 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 55 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 64 - G - - - ML 218 217 3 220 3 1 1 53 114 -10.002 -0.005 -8.656 -2.694 -2.826 1.860 -3.765 D 219 217 3 220 3 0 0 50 111 -6.174 -1.687 -0.566 IL 220 220 3 220 3 1 1 54 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 65 - A - - - ML 221 220 3 223 3 1 1 52 113 -3.790 -0.112 -8.656 1.344 -3.059 0.318 -3.398 D 222 220 3 223 3 0 0 49 109 -6.174 -1.687 -0.566 IL 223 223 3 223 3 1 1 53 113 -1.370 -0.769 -5.239 0.000 0.000 0.000 0.000 [ MATL 59 ] 68 - C - - - ML 224 223 3 226 3 1 1 51 112 -10.002 -0.005 -8.656 -3.046 1.231 -4.082 0.559 D 225 223 3 226 3 0 0 47 108 -6.174 -1.687 -0.566 IL 226 226 3 226 3 1 1 51 112 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 69 - G - - - ML 227 226 3 229 3 1 1 50 111 -3.314 -0.157 -8.656 -2.675 -3.868 1.881 -3.440 D 228 226 3 229 3 0 0 42 103 -6.174 -1.687 -0.566 IL 229 229 3 229 3 1 1 56 117 -0.438 -1.985 -6.735 0.000 0.000 0.000 0.000 [ MATL 61 ] 78 - U - - - ML 230 229 3 232 3 1 1 13 32 -10.002 -0.005 -8.656 -0.348 -0.929 -1.223 1.177 D 231 229 3 232 3 0 0 15 33 -6.174 -1.687 -0.566 IL 232 232 3 232 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 79 - C - - - ML 233 232 3 235 3 1 1 12 30 -10.002 -0.005 -8.656 -3.083 1.679 -3.443 -0.768 D 234 232 3 235 3 0 0 13 32 -6.174 -1.687 -0.566 IL 235 235 3 235 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 80 - A - - - ML 236 235 3 238 2 1 1 1 1 * 0.000 1.840 -2.782 -2.717 -3.024 D 237 235 3 238 2 0 0 0 0 * 0.000 IL 238 238 3 238 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 239 238 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME CyVA-1 ACC RF02965 DESC CyVA-1 RNA LENG 77 MAXL 147 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Dec 13 11:30:51 2018 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 123 EFFN 123.000000 CKSUM 1990293868 STATS LOCAL MSV -8.5115 0.71961 STATS LOCAL VITERBI -9.0571 0.71961 STATS LOCAL FORWARD -4.3154 0.71961 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.43534 1.52642 1.20944 1.40124 1.38629 1.38629 1.38629 1.38629 0.02872 7.13250 3.59325 1.46634 0.26236 0.00000 * 1 1.68937 2.11809 0.73295 1.53891 1 g - - ( 1.38629 1.38629 1.38629 1.38629 0.00164 7.10542 7.10542 1.46634 0.26236 0.05645 2.90255 2 1.93072 1.15301 1.76917 0.99751 2 u - - ( 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 3 0.58079 4.11479 0.98500 2.98032 3 A - - ( 1.38629 1.38629 1.38629 1.38629 0.03562 3.37573 7.13250 0.04608 3.10032 1.09861 0.40547 4 2.49511 0.54549 1.66555 1.90468 5 C - - ( 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 5 5.63050 0.71880 3.53580 0.73409 6 c - - ( 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 6 1.37226 3.51696 0.35872 4.00606 7 G - - ( 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 7 3.14297 2.18936 0.28081 2.41147 8 G - - , 1.38629 1.38629 1.38629 1.38629 0.14233 2.02596 7.13250 0.01207 4.42304 1.09861 0.40547 8 0.94357 1.30835 1.94540 1.62167 10 a - - , 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 9 1.05542 2.31536 1.45890 1.13715 11 a - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 10 2.62085 1.21269 0.53545 3.11325 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 11 0.71639 3.55920 0.73852 5.25786 13 a - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 12 1.32142 2.34982 0.46238 4.81890 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 13 0.99311 1.95834 0.92457 2.38837 15 g - - _ 1.38629 1.38629 1.38629 1.38629 0.45371 1.01079 7.13250 0.00438 5.43207 1.09861 0.40547 14 3.09735 3.32599 0.42180 1.33549 17 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 15 6.54379 3.31933 7.08079 0.03922 18 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 16 6.02215 5.87235 4.12236 0.02168 19 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 17 1.36899 3.24783 2.30241 0.49962 20 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 18 2.15688 2.16195 4.01697 0.28607 21 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 19 0.69223 5.96965 0.89671 2.41824 22 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 20 5.28476 0.29318 3.15077 1.57878 23 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 21 3.82064 0.47012 4.44174 1.07475 24 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 22 4.35693 4.28830 0.02801 6.83694 25 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 23 3.67139 1.16297 5.88597 0.41669 26 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 24 2.19514 5.83038 6.48122 0.12309 27 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 25 3.04451 3.88426 1.08122 0.52318 28 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 26 1.76016 1.48792 1.96684 0.77167 29 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00925 7.13250 4.77895 1.46634 0.26236 1.09861 0.40547 27 1.61416 1.59758 0.68860 2.34049 30 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02568 7.12486 3.70725 1.46634 0.26236 0.17401 1.83440 28 1.28104 1.31012 1.55630 1.42068 31 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05390 2.96312 7.10866 0.54170 0.87170 0.06352 2.78798 29 4.38818 0.54658 2.33523 1.16520 34 C - - > 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 30 5.55549 0.64487 3.53326 0.81601 35 C - - > 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 31 3.37282 0.53615 1.18888 2.57508 36 C - - > 1.38629 1.38629 1.38629 1.38629 0.03670 7.13250 3.34573 1.46634 0.26236 1.09861 0.40547 32 1.27215 1.71197 2.29045 0.82544 37 u - - > 1.38629 1.38629 1.38629 1.38629 0.00166 7.09746 7.09746 1.46634 0.26236 0.04434 3.13796 33 3.54784 1.85058 1.76611 0.44150 38 U - - , 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 34 1.53765 2.36411 2.45063 0.50279 39 U - - , 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 35 0.86705 2.48695 1.22184 1.59968 40 a - - , 1.38629 1.38629 1.38629 1.38629 0.01971 7.13250 3.97827 1.46634 0.26236 1.09861 0.40547 36 1.58489 1.37359 1.61555 1.06987 41 u - - , 1.38629 1.38629 1.38629 1.38629 0.26284 1.46829 7.11442 0.09161 2.43563 0.08190 2.54298 37 1.87081 1.20570 1.81761 0.95683 44 u - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 38 1.82038 2.74366 0.42265 2.13375 45 G - - < 1.38629 1.38629 1.38629 1.38629 0.02290 3.82399 7.13250 0.07160 2.67223 1.09861 0.40547 39 2.29213 0.90599 2.00428 1.02151 47 c - - < 1.38629 1.38629 1.38629 1.38629 0.00893 7.13250 4.81701 1.46634 0.26236 1.09861 0.40547 40 1.04159 1.15074 2.43466 1.41437 48 a - - < 1.38629 1.38629 1.38629 1.38629 0.00161 7.12518 7.12518 1.46634 0.26236 0.18018 1.80252 41 2.07816 1.25455 1.38601 1.08009 49 u - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 42 0.90148 1.57360 1.66096 1.62568 50 a - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 43 6.50243 0.47976 6.51495 0.97263 51 C - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 44 2.07670 0.36561 2.95789 2.04830 52 C - - < 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 45 2.11850 1.92425 0.35637 3.39359 53 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00832 7.13250 4.89511 1.46634 0.26236 1.09861 0.40547 46 0.20823 3.23471 3.35891 2.17303 54 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00161 7.12579 7.12579 1.46634 0.26236 2.43088 0.09207 47 0.00200 7.66551 7.13925 7.22011 55 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00161 7.12579 7.12579 1.46634 0.26236 2.43088 0.09207 48 3.84945 6.36131 0.13786 2.24659 56 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04310 3.18505 7.12579 0.03842 3.27822 0.19349 1.73773 49 1.74500 2.13617 0.39477 3.39871 58 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 50 0.16767 2.89979 2.34123 5.76964 59 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 51 1.86294 7.27050 0.17082 6.79765 60 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 52 0.02214 7.35595 3.89303 7.04364 61 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 53 0.75014 6.82468 0.64355 6.73355 62 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 54 5.60022 0.21491 2.77895 2.05895 63 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 55 4.03305 3.38583 0.05455 6.49218 64 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 56 0.42844 4.12784 1.10647 6.41960 65 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08466 2.52098 7.13250 0.52552 0.89465 1.09861 0.40547 57 6.85599 0.48324 7.62535 0.96318 68 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 58 3.76748 4.63759 0.04557 4.44347 69 G - - _ 1.38629 1.38629 1.38629 1.38629 0.11957 2.19017 7.13250 1.66749 0.20914 1.09861 0.40547 59 1.77735 2.24179 2.46952 0.44625 78 U - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 60 5.78819 0.16764 4.35966 1.97690 79 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 61 0.06332 3.72579 3.70724 4.36457 80 A - - _ 1.38629 1.38629 1.38629 1.38629 0.08477 7.13250 2.51980 1.46634 0.26236 1.09861 0.40547 62 1.75381 2.64981 0.33939 3.12319 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.00174 7.04947 7.04947 1.46634 0.26236 0.01966 3.93920 63 0.91039 4.68351 0.53328 6.37018 82 G - - > 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 64 1.49009 1.62722 1.41450 1.09325 83 u - - > 1.38629 1.38629 1.38629 1.38629 0.00739 7.13250 5.02629 1.46634 0.26236 1.09861 0.40547 65 1.27068 1.68440 0.88438 2.11335 84 g - - > 1.38629 1.38629 1.38629 1.38629 0.00161 7.12672 7.12672 1.46634 0.26236 0.21785 1.63091 66 1.37527 2.71072 1.17725 0.98721 85 u - - > 1.38629 1.38629 1.38629 1.38629 0.01486 7.13250 4.27222 1.46634 0.26236 1.09861 0.40547 67 1.25420 2.27781 0.71277 2.10453 86 g - - > 1.38629 1.38629 1.38629 1.38629 0.00162 7.11926 7.11926 1.46634 0.26236 0.10841 2.27554 68 2.20742 0.54162 2.43157 1.51271 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.01476 7.13250 4.27929 1.46634 0.26236 1.09861 0.40547 69 1.05577 1.86769 1.12556 1.75374 88 a - - > 1.38629 1.38629 1.38629 1.38629 0.05689 7.11936 2.90961 1.46634 0.26236 1.03558 0.43854 70 0.90815 2.21930 0.77584 3.58539 89 g - - , 1.38629 1.38629 1.38629 1.38629 0.02549 3.71661 7.06918 0.06858 2.71390 0.16997 1.85591 71 0.23276 2.52584 2.08279 5.78115 91 A - - , 1.38629 1.38629 1.38629 1.38629 0.00161 7.12409 7.12409 1.46634 0.26236 0.16065 1.90777 72 5.22717 0.37014 3.16284 1.34059 92 C - - ) 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 73 0.82484 3.93501 0.63757 4.29953 93 G - - ) 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 74 1.98890 2.32385 0.49740 1.85056 94 G - - ) 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 75 2.90319 1.24606 3.30654 0.47663 95 U - - ) 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 76 1.47394 1.92367 0.82755 1.67243 96 g - - ) 1.38629 1.38629 1.38629 1.38629 0.00160 7.13250 7.13250 1.46634 0.26236 1.09861 0.40547 77 1.74054 0.83382 2.12460 1.30672 97 c - - ) 1.38629 1.38629 1.38629 1.38629 0.00080 7.13170 * 1.46634 0.26236 0.00000 * //