INFERNAL1/a [1.1.4 | Dec 2020] NAME chrB-b ACC RF03086 DESC chrB-b RNA STATES 162 NODES 46 CLEN 51 W 294 ALPH RNA RF no CONS yes MAP yes DATE Fri Jan 4 12:56:04 2019 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 313 EFFN 24.973709 CKSUM 1912585641 NULL 0.000 0.000 0.000 0.000 GA 36.50 TC 36.50 NC 36.40 EFP7GF -20.3102 0.71924 ECMLC 0.62952 -9.60068 0.64942 1600000 761226 0.001576 ECMGC 0.33457 -22.19106 -5.67464 1600000 100439 0.003983 ECMLI 0.55565 -9.99840 1.39496 1600000 673901 0.001781 ECMGI 0.34788 -18.46257 -3.47132 1600000 73620 0.005433 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 294 580 -9.674 -10.920 -0.065 -4.569 IL 1 1 2 1 4 2 21 295 582 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 2 21 295 582 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 128 - C - - MR 3 2 3 5 3 4 20 294 581 -11.042 -0.003 -9.359 -3.835 1.848 -2.238 -3.080 D 4 2 3 5 3 0 18 293 579 -7.972 -0.361 -2.202 IR 5 5 3 5 3 1 20 294 581 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 2 ] - 127 - G - - MR 6 5 3 8 3 3 19 293 580 -11.094 -0.005 -8.556 -5.310 -5.178 1.975 -6.016 D 7 5 3 8 3 0 16 291 578 -6.390 -1.568 -0.620 IR 8 8 3 8 3 1 19 293 580 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 126 - U - - MR 9 8 3 11 3 2 18 292 579 -11.093 -0.003 -9.410 -3.784 -1.740 -3.586 1.826 D 10 8 3 11 3 0 15 290 577 -6.482 -1.402 -0.712 IR 11 11 3 11 3 1 18 292 579 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 125 - C - - MR 12 11 3 14 3 1 17 291 578 -11.094 -0.045 -5.041 -4.954 1.918 -4.771 -2.705 D 13 11 3 14 3 0 15 289 576 -6.390 -1.568 -0.620 IR 14 14 3 14 3 1 17 292 578 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 124 - u - - MR 15 14 3 17 3 1 16 290 577 -6.248 -0.101 -4.197 -1.187 -0.756 0.091 0.929 D 16 14 3 17 3 0 15 289 576 -7.773 -0.423 -2.003 IR 17 17 3 17 3 1 16 290 577 -2.269 -0.418 -4.507 0.000 0.000 0.000 0.000 [ MATR 6 ] - 122 - c - - MR 18 17 3 20 3 1 15 289 576 -11.018 -0.003 -9.336 -2.076 0.937 -2.026 0.680 D 19 17 3 20 3 0 13 288 575 -8.341 -0.271 -2.570 IR 20 20 3 20 3 1 15 290 576 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 121 - G - - MR 21 20 3 23 3 1 14 288 575 -11.094 -0.003 -9.412 -2.997 -5.891 1.926 -4.121 D 22 20 3 23 3 0 11 286 573 -6.390 -1.568 -0.620 IR 23 23 3 23 3 1 14 289 575 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 120 - A - - MR 24 23 3 26 3 1 13 287 574 -11.094 -0.003 -9.412 1.988 -6.853 -6.201 -6.381 D 25 23 3 26 3 0 11 285 572 -6.390 -1.568 -0.620 IR 26 26 3 26 3 1 13 288 574 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 119 - A - - MR 27 26 3 29 3 1 12 286 573 -11.094 -0.003 -9.412 1.977 -5.142 -5.764 -5.837 D 28 26 3 29 3 0 10 285 571 -6.390 -1.568 -0.620 IR 29 29 3 29 3 1 12 287 573 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 118 - C - - MR 30 29 3 32 2 1 11 285 572 -5.598 -0.030 -5.786 1.967 -6.192 -4.122 D 31 29 3 32 2 0 10 284 571 -4.432 -0.068 IR 32 32 3 32 2 1 11 285 572 -2.471 -0.287 0.000 0.000 0.000 0.000 [ BIF 11 ] - - - - - - B 33 32 3 34 102 0 10 284 571 [ BEGL 12 ] - - - - - - S 34 33 1 35 4 0 0 37 56 -0.030 -8.124 -6.079 -8.987 [ MATP 13 ] 1 29 c g - - MP 35 34 1 39 6 2 2 37 56 -10.896 -10.835 -0.006 -9.612 -9.891 -10.286 -2.402 -2.733 -2.112 0.459 -0.525 -3.045 2.208 -2.480 -2.325 1.217 -2.918 -1.237 0.791 -2.582 1.459 -0.496 ML 36 34 1 39 6 1 1 36 54 -6.344 -6.690 -1.182 -1.098 -6.539 -4.069 0.245 -0.207 -0.380 0.239 MR 37 34 1 39 6 1 1 36 54 -7.514 -6.243 -0.914 -6.221 -1.355 -4.435 -0.065 -0.971 0.830 -0.403 D 38 34 1 39 6 0 0 33 52 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 39 39 5 39 6 1 1 37 56 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 40 40 6 40 5 1 1 37 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 2 28 C G - - MP 41 40 6 45 6 2 2 35 54 -10.914 -6.760 -0.020 -8.816 -9.909 -10.304 -6.464 -5.441 -6.368 -1.738 -5.802 -7.045 3.046 -6.164 -6.238 2.733 -4.351 -2.156 -1.844 -6.623 -3.324 -5.114 ML 42 40 6 45 6 1 1 34 52 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 43 40 6 45 6 1 1 34 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 44 40 6 45 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 45 45 5 45 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 46 46 6 46 5 1 1 35 53 -2.648 -0.408 -6.160 -4.327 -5.433 0.000 0.000 0.000 0.000 [ MATP 15 ] 3 26 G C - - MP 47 46 6 51 6 2 2 33 52 -10.912 -10.852 -0.006 -9.628 -9.908 -10.303 -8.684 -5.484 -10.324 -2.897 -9.966 -6.680 -2.502 -9.987 -6.837 3.953 -7.043 -3.393 -4.985 -7.122 -6.933 -9.237 ML 48 46 6 51 6 1 1 32 50 -6.313 -6.659 -1.222 -1.068 -6.509 -4.038 0.372 -0.523 0.079 -0.068 MR 49 46 6 51 6 1 1 32 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 50 46 6 51 6 0 0 30 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 51 51 5 51 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 52 52 6 52 5 1 1 33 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 4 25 G C - - MP 53 52 6 57 6 2 2 31 50 -10.914 -10.853 -0.011 -7.765 -9.909 -10.304 -8.706 -5.479 -10.495 -2.895 -10.375 -6.685 -4.755 -10.170 -6.839 3.960 -7.046 -2.560 -5.104 -7.133 -7.170 -9.387 ML 54 52 6 57 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 55 52 6 57 6 1 1 30 49 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 56 52 6 57 6 0 0 28 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 57 57 5 57 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 58 58 6 58 5 1 1 31 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 5 24 G C - - MP 59 58 6 63 6 2 2 29 48 -10.909 -10.848 -0.015 -7.109 -9.904 -10.299 -8.634 -3.684 -10.191 -2.846 -10.170 -6.633 -4.601 -10.107 -6.817 3.939 -7.015 -2.046 -4.949 -3.500 -6.982 -9.187 ML 60 58 6 63 6 1 1 29 48 -6.458 -6.804 -1.049 -1.213 -6.654 -4.183 0.239 -0.639 0.347 -0.143 MR 61 58 6 63 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 62 58 6 63 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 63 63 5 63 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 64 64 6 64 5 1 1 29 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 6 23 a u - - MP 65 64 6 69 4 2 2 27 46 -9.853 -10.060 -0.007 -8.474 -2.663 -2.506 -2.735 2.429 -2.835 -3.703 1.304 -2.944 -2.923 0.747 -3.121 0.296 1.218 -2.639 -0.980 0.225 ML 66 64 6 69 4 1 1 28 47 -4.029 -4.211 -0.406 -2.941 0.121 -0.756 0.551 -0.226 MR 67 64 6 69 4 1 1 28 47 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 68 64 6 69 4 0 0 27 46 -4.568 -4.250 -2.265 -0.520 IL 69 69 5 69 4 1 1 30 49 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 70 70 6 70 3 1 1 29 48 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 7 - u - - - ML 71 70 6 73 3 1 1 25 44 -10.787 -0.053 -4.825 -0.301 0.579 -3.349 0.675 D 72 70 6 73 3 0 0 24 43 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 1 28 47 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 8 - a - - - ML 74 73 3 76 3 1 1 24 43 -10.738 -0.190 -3.026 0.418 -0.478 -0.459 0.285 D 75 73 3 76 3 0 0 22 41 -7.858 -3.371 -0.154 IL 76 76 3 76 3 1 1 27 46 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 9 - u - - - ML 77 76 3 79 3 1 1 23 42 -10.551 -0.377 -2.126 0.087 0.003 -0.917 0.491 D 78 76 3 79 3 0 0 20 39 -9.618 -5.131 -0.044 IL 79 79 3 79 3 1 1 26 45 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 10 - u - - - ML 80 79 3 82 3 1 1 23 41 -1.274 -0.775 -8.833 0.161 0.218 -1.377 0.415 D 81 79 3 82 3 0 0 19 37 -10.730 -0.043 -5.121 IL 82 82 3 82 3 1 1 22 41 -1.527 -0.631 -7.102 0.000 0.000 0.000 0.000 [ MATL 23 ] 15 - G - - - ML 83 82 3 85 3 1 1 19 37 -10.787 -0.003 -9.441 -1.960 -3.834 1.788 -2.190 D 84 82 3 85 3 0 0 18 37 -6.174 -1.687 -0.566 IL 85 85 3 85 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 16 - C - - - ML 86 85 3 88 3 1 1 18 36 -10.787 -0.003 -9.441 -5.818 1.970 -6.226 -4.256 D 87 85 3 88 3 0 0 17 36 -6.174 -1.687 -0.566 IL 88 88 3 88 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 17 - A - - - ML 89 88 3 91 3 1 1 17 35 -10.787 -0.003 -9.441 1.823 -3.629 -1.582 -4.380 D 90 88 3 91 3 0 0 16 35 -6.174 -1.687 -0.566 IL 91 91 3 91 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 18 - G - - - ML 92 91 3 94 3 1 1 16 34 -10.787 -0.003 -9.441 -3.173 -4.184 1.928 -5.058 D 93 91 3 94 3 0 0 15 34 -6.174 -1.687 -0.566 IL 94 94 3 94 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 19 - a - - - ML 95 94 3 97 3 1 1 15 33 -5.496 -0.037 -8.288 0.592 -0.076 0.145 -1.192 D 96 94 3 97 3 0 0 13 31 -6.174 -1.687 -0.566 IL 97 97 3 97 3 1 1 17 36 -1.462 -0.736 -4.773 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - C - - - ML 98 97 3 100 2 1 1 1 1 * 0.000 -4.458 1.911 -5.467 -2.556 D 99 97 3 100 2 0 0 0 0 * 0.000 IL 100 100 3 100 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 29 ] - - - - - - E 101 100 3 -1 0 0 0 0 0 [ BEGR 30 ] - - - - - - S 102 33 1 103 3 0 0 262 549 -10.787 -0.532 -1.699 IL 103 103 2 103 3 1 1 267 554 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 30 - C - - - ML 104 103 2 106 3 1 1 267 554 -10.259 -0.123 -3.631 -1.923 1.347 -1.618 -0.207 D 105 103 2 106 3 0 0 240 527 -10.570 -6.083 -0.022 IL 106 106 3 106 3 1 1 267 554 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 31 - a - - - ML 107 106 3 109 3 1 1 267 554 -0.210 -2.907 -8.795 0.092 0.038 -0.048 -0.090 D 108 106 3 109 3 0 0 239 526 -2.715 -0.291 -5.052 IL 109 109 3 109 3 1 1 268 555 -0.093 -4.014 -11.559 0.000 0.000 0.000 0.000 [ MATL 33 ] 91 - u - - - ML 110 109 3 112 3 1 1 36 58 -10.786 -0.003 -9.440 -0.806 0.502 -1.682 0.766 D 111 109 3 112 3 0 0 35 57 -6.267 -1.499 -0.659 IL 112 112 3 112 3 1 1 38 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 92 - a - - - ML 113 112 3 115 3 1 1 35 57 -10.787 -0.003 -9.441 0.762 0.421 -1.483 -0.717 D 114 112 3 115 3 0 0 34 56 -6.174 -1.687 -0.566 IL 115 115 3 115 3 1 1 37 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 93 - A - - - ML 116 115 3 118 5 1 1 34 56 -9.749 -0.006 -9.565 -9.777 -10.669 1.895 -3.101 -3.554 -3.676 D 117 115 3 118 5 0 0 33 55 -4.959 -0.803 -4.221 -2.596 -2.508 IL 118 118 3 118 5 1 1 34 57 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 94 116 G C - - MP 119 118 3 123 6 2 2 33 55 -10.914 -10.853 -0.015 -7.038 -9.909 -10.304 -5.399 -3.268 -1.477 0.266 -6.459 -5.967 -1.541 -3.796 -5.580 3.688 -5.887 -1.033 -1.793 -5.200 -3.543 -4.185 ML 120 118 3 123 6 1 1 32 54 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 121 118 3 123 6 1 1 31 54 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 122 118 3 123 6 0 0 29 51 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 123 123 5 123 6 1 1 33 55 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 124 124 6 124 5 1 1 32 55 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 95 115 A U - - MP 125 124 6 129 6 2 2 31 53 -10.904 -10.844 -0.006 -9.620 -9.900 -10.295 -6.625 -5.286 -6.802 3.689 -8.843 -9.704 -4.257 -3.449 -6.400 1.100 -7.054 -0.764 -4.231 -7.972 -6.113 -3.568 ML 126 124 6 129 6 1 1 29 52 -6.623 -6.969 -1.683 -0.707 -6.819 -4.348 0.889 -0.762 -0.495 -0.237 MR 127 124 6 129 6 1 1 29 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 128 124 6 129 6 0 0 27 49 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 129 129 5 129 6 1 1 31 53 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 130 130 6 130 5 1 1 30 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 38 ] 96 114 C G - - MP 131 130 6 135 6 2 2 29 51 -10.904 -10.844 -0.078 -9.620 -9.900 -4.340 -7.085 -7.089 -6.654 -0.712 -5.149 -6.985 3.679 -4.521 -6.676 -2.946 -6.923 -4.994 1.038 -7.058 -2.245 -5.449 ML 132 130 6 135 6 1 1 28 50 -6.623 -6.969 -0.891 -1.378 -6.819 -4.348 0.889 -0.762 -0.495 -0.237 MR 133 130 6 135 6 1 1 28 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 134 130 6 135 6 0 0 25 47 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 135 135 5 135 6 1 1 29 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 136 136 6 136 5 1 1 28 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 97 113 G C - - MP 137 136 6 141 6 2 2 27 49 -10.842 -10.782 -0.191 -9.558 -7.863 -3.091 -5.868 -2.436 -5.769 -0.475 -6.867 -5.930 -0.634 -6.413 -5.817 3.761 -6.064 -1.543 -2.174 -5.437 -2.598 -4.724 ML 138 136 6 141 6 1 1 26 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 139 136 6 141 6 1 1 26 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 140 136 6 141 6 0 0 23 45 -10.997 -9.695 -5.492 -6.175 -6.192 -0.076 IL 141 141 5 141 6 1 1 27 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 142 142 6 142 5 1 1 27 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 98 112 G C - - MP 143 142 6 147 4 2 2 25 48 -3.700 -2.710 -0.383 -8.168 -4.878 -3.526 -4.702 0.588 -5.755 -5.295 1.118 -5.363 -5.118 3.353 -4.594 -0.114 -1.116 -4.560 -1.707 -3.661 ML 144 142 6 147 4 1 1 24 46 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 145 142 6 147 4 1 1 24 46 -5.001 -2.430 -1.897 -0.958 0.711 -0.621 -0.330 -0.125 D 146 142 6 147 4 0 0 23 45 -7.862 -1.398 -0.875 -3.814 IL 147 147 5 147 4 1 1 26 48 -1.503 -0.921 -3.174 -6.912 0.000 0.000 0.000 0.000 IR 148 148 6 148 3 1 1 24 46 -1.193 -0.847 -7.285 0.000 0.000 0.000 0.000 [ MATL 41 ] 101 - u - - - ML 149 148 6 151 3 1 1 14 33 -10.787 -0.003 -9.441 -0.319 -0.064 -1.220 0.858 D 150 148 6 151 3 0 0 15 34 -6.174 -1.687 -0.566 IL 151 151 3 151 3 1 1 19 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 102 - g - - - ML 152 151 3 154 3 1 1 13 31 -10.787 -0.006 -8.221 -1.348 -0.306 0.773 0.124 D 153 151 3 154 3 0 0 14 33 -6.174 -1.687 -0.566 IL 154 154 3 154 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 43 ] 103 - U - - - ML 155 154 3 157 3 1 1 11 30 -10.785 -0.255 -2.629 -0.511 -0.311 -1.167 1.034 D 156 154 3 157 3 0 0 13 32 -6.344 -1.857 -0.491 IL 157 157 3 157 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 44 ] 104 - C - - - ML 158 157 3 160 2 1 1 1 1 * 0.000 -1.254 1.047 -1.196 0.108 D 159 157 3 160 2 0 0 0 0 * 0.000 IL 160 160 3 160 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 45 ] - - - - - - E 161 160 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME chrB-b ACC RF03086 DESC chrB-b RNA LENG 51 MAXL 309 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Jan 4 12:56:04 2019 COM [1] /nfs/production/xfam/rfam/rfam_rh7/software/bin/cmbuild -F CM SEED NSEQ 313 EFFN 99.498428 CKSUM 1912585641 STATS LOCAL MSV -7.3118 0.71924 STATS LOCAL VITERBI -8.3099 0.71924 STATS LOCAL FORWARD -3.5121 0.71924 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.66224 1.09031 1.23845 1.69098 1.38629 1.38629 1.38629 1.38629 0.01603 6.83730 4.21107 1.46634 0.26236 0.00000 * 1 2.63653 0.90792 1.73618 1.05315 1 c - - < 1.38629 1.38629 1.38629 1.38629 0.00218 6.82345 6.82345 1.46634 0.26236 0.13514 2.06823 2 5.43497 0.59077 0.82500 5.65342 2 C - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 3 5.61385 4.46852 0.01667 6.55894 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 4 5.66599 6.71721 0.00594 6.68706 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 5 4.79845 6.47716 0.01780 4.84628 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 6 0.84321 1.92281 1.70591 1.41935 6 a - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 7 1.60714 0.96017 5.31290 0.88726 7 u - - _ 1.38629 1.38629 1.38629 1.38629 0.03837 6.83730 3.30853 1.46634 0.26236 1.09861 0.40547 8 1.07616 1.73712 1.71110 1.19599 8 a - - _ 1.38629 1.38629 1.38629 1.38629 0.13888 6.80116 2.05141 1.46634 0.26236 3.58579 0.02811 9 1.35989 1.33628 2.12839 1.01761 9 u - - _ 1.38629 1.38629 1.38629 1.38629 0.27883 6.66483 1.41859 1.46634 0.26236 5.01488 0.00666 10 1.28221 1.16295 2.65027 1.08063 10 u - - _ 1.38629 1.38629 1.38629 1.38629 0.59404 0.80693 6.38937 0.42567 1.05939 0.00591 5.13430 11 2.96017 4.79231 0.11539 3.01843 15 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 12 6.72650 0.01057 6.99253 4.77944 16 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 13 0.10183 4.29511 2.52333 5.81152 17 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 14 3.82441 4.44988 0.03573 6.44715 18 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 15 0.94272 1.38199 1.23297 2.68931 19 a - - _ 1.38629 1.38629 1.38629 1.38629 0.02701 3.74127 5.83578 0.48542 0.95565 1.09861 0.40547 16 5.02904 0.04966 6.35428 3.21482 22 C - - _ 1.38629 1.38629 1.38629 1.38629 0.00973 6.83545 4.75524 1.46634 0.26236 0.55080 0.85918 17 1.94825 2.32788 1.83244 0.51091 23 U - - > 1.38629 1.38629 1.38629 1.38629 0.00642 6.82976 5.23642 1.46634 0.26236 0.22299 1.61006 18 6.67484 0.01836 6.63466 4.15958 24 C - - > 1.38629 1.38629 1.38629 1.38629 0.00216 6.83309 6.83309 1.46634 0.26236 0.34110 1.24129 19 6.57773 0.01324 6.57214 4.56953 25 C - - > 1.38629 1.38629 1.38629 1.38629 0.00336 6.83730 6.08360 1.46634 0.26236 1.09861 0.40547 20 6.40850 0.01851 4.44582 5.30537 26 C - - > 1.38629 1.38629 1.38629 1.38629 0.01321 4.41867 6.83609 0.16965 1.85762 0.66333 0.72388 21 5.68044 0.85186 0.58566 4.32543 28 G - - > 1.38629 1.38629 1.38629 1.38629 0.00397 6.83730 5.84649 1.46634 0.26236 1.09861 0.40547 22 1.95015 1.82034 0.55358 2.11290 29 G - - > 1.38629 1.38629 1.38629 1.38629 0.38933 6.83548 1.13502 1.46634 0.26236 1.54616 0.23961 23 3.28507 0.37954 2.52109 1.61940 30 C - - - 1.38629 1.38629 1.38629 1.38629 0.01824 6.44932 4.10508 1.46634 0.26236 3.15322 0.04365 24 1.37054 1.27794 1.34586 1.57454 31 c - - - 1.38629 1.38629 1.38629 1.38629 2.83220 0.06236 6.45327 2.82611 0.06107 0.01004 4.60637 25 2.11105 0.99367 2.74671 0.81072 91 u - - - 1.38629 1.38629 1.38629 1.38629 0.00215 6.83623 6.83623 1.46634 0.26236 0.69356 0.69274 26 0.80922 1.01542 2.62203 2.12116 92 a - - - 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 27 0.05052 3.73013 4.24429 4.51628 93 A - - - 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 28 2.59679 4.99002 0.08820 5.77591 94 G - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 29 0.18655 4.94580 1.85439 5.03283 95 A - - < 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 30 3.24464 0.18448 6.06054 2.06241 96 C - - < 1.38629 1.38629 1.38629 1.38629 0.06515 6.83730 2.78066 1.46634 0.26236 1.09861 0.40547 31 3.52351 3.41165 0.07650 4.49488 97 G - - < 1.38629 1.38629 1.38629 1.38629 0.16883 6.77444 1.86949 1.46634 0.26236 4.09067 0.01687 32 2.74603 1.88289 0.28250 3.51422 98 G - - < 1.38629 1.38629 1.38629 1.38629 0.08554 2.51787 6.60832 0.47323 0.97548 0.01038 4.57335 33 1.70883 1.40643 2.38006 0.73114 101 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 34 2.82627 1.57591 0.77329 1.30029 102 g - - _ 1.38629 1.38629 1.38629 1.38629 0.00416 6.83730 5.78293 1.46634 0.26236 1.09861 0.40547 35 1.88054 1.60533 2.31414 0.60181 103 U - - _ 1.38629 1.38629 1.38629 1.38629 0.17577 6.83529 1.83188 1.46634 0.26236 1.58313 0.22983 36 2.56323 0.58606 2.24006 1.34716 104 C - - _ 1.38629 1.38629 1.38629 1.38629 0.42929 1.32885 2.47400 0.61548 0.77736 0.36102 1.19391 37 4.25496 0.35457 1.76793 2.17470 112 C - - > 1.38629 1.38629 1.38629 1.38629 0.03857 6.71268 3.30725 1.46634 0.26236 0.30692 1.33070 38 6.03370 0.07384 3.18857 3.59177 113 C - - > 1.38629 1.38629 1.38629 1.38629 0.01087 6.77444 4.63897 1.46634 0.26236 0.03403 3.39753 39 2.11217 6.48229 0.17408 3.28978 114 G - - > 1.38629 1.38629 1.38629 1.38629 0.00217 6.82926 6.82926 1.46634 0.26236 2.34765 0.10048 40 6.55375 2.06569 6.57780 0.13874 115 U - - > 1.38629 1.38629 1.38629 1.38629 0.00217 6.82926 6.82926 1.46634 0.26236 0.21219 1.65451 41 5.97356 0.10245 3.51684 2.73122 116 C - - > 1.38629 1.38629 1.38629 1.38629 0.02319 3.82369 6.83730 0.09549 2.39611 1.09861 0.40547 42 6.70689 0.01201 6.97053 4.62817 118 C - - : 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 43 0.00804 5.14823 6.80375 6.82652 119 A - - : 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 44 0.00240 7.47739 6.95441 7.03788 120 A - - : 1.38629 1.38629 1.38629 1.38629 0.00215 6.83730 6.83730 1.46634 0.26236 1.09861 0.40547 45 3.58154 7.03370 0.04060 4.50315 121 G - - : 1.38629 1.38629 1.38629 1.38629 0.05837 6.83730 2.88911 1.46634 0.26236 1.09861 0.40547 46 3.35637 0.69899 2.90063 0.88416 122 c - - : 1.38629 1.38629 1.38629 1.38629 0.04967 4.20374 3.39558 0.14557 1.99903 0.03785 3.29289 47 2.65809 1.97952 1.24870 0.68338 124 U - - : 1.38629 1.38629 1.38629 1.38629 0.00222 6.80620 6.80620 1.46634 0.26236 0.06552 2.75800 48 6.07660 0.04502 5.14476 3.32721 125 C - - : 1.38629 1.38629 1.38629 1.38629 0.00341 6.83730 6.06032 1.46634 0.26236 1.09861 0.40547 49 5.23206 2.64291 4.20131 0.09593 126 U - - : 1.38629 1.38629 1.38629 1.38629 0.00215 6.83604 6.83604 1.46634 0.26236 0.65211 0.73594 50 6.42594 5.06999 0.00891 6.93549 127 G - - : 1.38629 1.38629 1.38629 1.38629 0.00223 6.79862 6.79862 1.46634 0.26236 1.09861 0.40547 51 4.47132 0.09592 2.80743 3.92840 128 C - - : 1.38629 1.38629 1.38629 1.38629 0.00112 6.79750 * 1.46634 0.26236 0.00000 * //