INFERNAL1/a [1.1.4 | Dec 2020] NAME c-di-GMP-I-GGC ACC RF03167 DESC c-di-GMP-I-GGC riboswitch STATES 243 NODES 66 CLEN 78 W 512 ALPH RNA RF no CONS yes MAP yes DATE Wed Jul 1 10:33:27 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 38 EFFN 11.990967 CKSUM 4073917778 NULL 0.000 0.000 0.000 0.000 GA 55.00 TC 55.00 NC 54.90 EFP7GF -15.6156 0.71872 ECMLC 0.75699 -6.77904 1.04860 1600000 449319 0.002671 ECMGC 0.42412 -17.31843 -5.94919 1600000 49680 0.008052 ECMLI 0.63590 -6.38410 2.20593 1600000 282791 0.004243 ECMGI 0.45983 -12.12727 -2.09360 1600000 40347 0.009914 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 512 1019 -8.896 -9.103 -0.014 -7.517 IL 1 1 2 1 4 6 38 515 1022 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 6 37 515 1022 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 8 37 513 1020 -9.833 -0.006 -8.487 -0.128 0.667 -1.095 0.041 D 4 2 3 5 3 2 32 511 1017 -6.174 -1.687 -0.566 IL 5 5 3 5 3 5 36 514 1021 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - a - - - ML 6 5 3 8 3 8 36 512 1019 -9.833 -0.006 -8.487 0.179 0.158 -0.449 0.028 D 7 5 3 8 3 2 31 510 1016 -6.174 -1.687 -0.566 IL 8 8 3 8 3 5 36 513 1020 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 7 35 511 1018 -9.833 -0.006 -8.487 -0.405 0.771 -2.015 0.368 D 10 8 3 11 3 2 30 509 1015 -6.174 -1.687 -0.566 IL 11 11 3 11 3 5 35 512 1019 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - G - - - ML 12 11 3 14 3 7 35 510 1017 -9.833 -0.006 -8.487 -0.671 -0.257 1.027 -1.008 D 13 11 3 14 3 1 30 508 1014 -6.174 -1.687 -0.566 IL 14 14 3 14 3 4 34 511 1018 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - a - - - ML 15 14 3 17 3 6 34 509 1016 -9.833 -0.006 -8.487 0.891 -0.965 -0.038 -0.601 D 16 14 3 17 3 1 29 507 1014 -6.174 -1.687 -0.566 IL 17 17 3 17 3 4 33 510 1017 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 6 33 508 1015 -9.833 -0.006 -8.487 0.540 0.309 -1.517 -0.062 D 19 17 3 20 3 1 28 506 1013 -6.174 -1.687 -0.566 IL 20 20 3 20 3 4 32 509 1016 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - A - - - ML 21 20 3 23 3 6 32 507 1014 -9.833 -0.006 -8.487 1.629 -1.656 -2.215 -1.415 D 22 20 3 23 3 1 28 505 1012 -6.174 -1.687 -0.566 IL 23 23 3 23 3 3 31 508 1015 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - A - - - ML 24 23 3 26 3 5 31 506 1013 -9.833 -0.006 -8.487 1.418 -2.538 -0.667 -0.926 D 25 23 3 26 3 0 27 504 1011 -6.174 -1.687 -0.566 IL 26 26 3 26 3 3 30 507 1014 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - A - - - ML 27 26 3 29 3 5 30 505 1012 -9.833 -0.006 -8.487 1.299 -1.361 -0.513 -1.152 D 28 26 3 29 3 0 26 503 1010 -6.174 -1.687 -0.566 IL 29 29 3 29 3 3 30 506 1013 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - G - - - ML 30 29 3 32 3 4 29 504 1011 -10.154 -0.005 -8.471 -4.533 -6.111 1.970 -5.267 D 31 29 3 32 3 0 26 503 1009 -5.620 -0.734 -1.403 IL 32 32 3 32 3 2 28 505 1012 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 181 - a - - MR 33 32 3 35 3 4 28 503 1010 -10.154 -0.005 -8.471 0.355 -0.086 -0.296 -0.053 D 34 32 3 35 3 0 24 501 1008 -6.390 -1.568 -0.620 IR 35 35 3 35 3 2 27 504 1011 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 180 - a - - MR 36 35 3 38 3 3 27 502 1009 -10.154 -0.005 -8.471 0.727 -1.288 -0.087 -0.009 D 37 35 3 38 3 0 23 500 1007 -6.390 -1.568 -0.620 IR 38 38 3 38 3 2 27 503 1010 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 179 - a - - MR 39 38 3 41 3 3 26 501 1008 -10.154 -0.005 -8.471 0.542 -0.069 -0.870 0.061 D 40 38 3 41 3 0 23 499 1006 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 26 502 1009 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 178 - G - - MR 42 41 3 44 3 3 25 500 1007 -10.154 -0.005 -8.471 -0.602 -2.748 1.396 -0.833 D 43 41 3 44 3 0 22 498 1005 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 25 501 1008 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 177 - C - - MR 45 44 3 47 3 3 24 499 1006 -10.154 -0.005 -8.471 -1.049 1.264 -3.085 -0.005 D 46 44 3 47 3 0 22 497 1004 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 24 500 1007 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 176 - C - - MR 48 47 3 50 3 2 23 498 1005 -10.154 -0.005 -8.471 -5.120 1.962 -5.632 -4.214 D 49 47 3 50 3 0 21 497 1004 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 23 499 1006 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 175 - G - - MR 51 50 3 53 2 1 22 497 1004 -10.422 -0.001 -0.640 -4.034 1.684 -3.563 D 52 50 3 53 2 0 21 497 1003 -4.432 -0.068 IR 53 53 3 53 2 1 22 498 1005 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 18 ] - - - - - - B 54 53 3 55 135 0 21 496 1003 [ BEGL 19 ] - - - - - - S 55 54 1 56 4 0 0 39 58 -0.018 -8.122 -7.530 -8.170 [ MATP 20 ] 11 38 G C - - MP 56 55 1 60 6 2 2 39 58 -10.171 -10.110 -0.026 -8.887 -6.330 -9.562 -4.463 -1.819 -4.354 0.221 -1.671 -4.993 1.883 -4.670 -4.608 3.106 -4.948 -1.110 -0.281 -4.309 -1.930 -3.276 ML 57 55 1 60 6 1 1 39 58 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 58 55 1 60 6 1 1 39 58 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 59 55 1 60 6 0 0 37 56 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 60 60 5 60 6 1 1 39 58 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 61 61 6 61 5 1 1 39 57 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 12 37 C G - - MP 62 61 6 66 4 2 2 37 56 -8.874 -9.081 -0.014 -7.495 -6.545 -6.727 -5.946 -2.876 -4.341 -6.145 3.730 -5.236 -6.025 -2.794 -6.184 -4.920 0.125 -6.427 0.165 -4.818 ML 63 61 6 66 4 1 1 39 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 64 61 6 66 4 1 1 38 57 -5.185 -4.214 -1.103 -1.142 0.103 -0.775 0.580 -0.241 D 65 61 6 66 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 66 66 5 66 4 1 1 40 59 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 67 67 6 67 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 13 - A - - - ML 68 67 6 70 3 1 1 34 53 -9.833 -0.006 -8.487 1.724 -3.422 -1.166 -2.657 D 69 67 6 70 3 0 0 34 53 -6.174 -1.687 -0.566 IL 70 70 3 70 3 1 1 38 57 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 14 - A - - - ML 71 70 3 73 3 1 1 33 52 -9.833 -0.006 -8.487 1.630 -1.065 -1.932 -2.610 D 72 70 3 73 3 0 0 33 52 -6.174 -1.687 -0.566 IL 73 73 3 73 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 15 - A - - - ML 74 73 3 76 3 1 1 32 51 -10.154 -0.005 -8.471 1.773 -1.854 -2.464 -2.995 D 75 73 3 76 3 0 0 31 50 -5.620 -0.734 -1.403 IL 76 76 3 76 3 1 1 33 52 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 36 - C - - MR 77 76 3 79 3 1 1 31 50 -10.154 -0.018 -6.421 -0.864 1.578 -3.584 -1.387 D 78 76 3 79 3 0 0 30 48 -6.390 -1.568 -0.620 IR 79 79 3 79 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 26 ] - 35 - A - - MR 80 79 3 82 3 1 1 30 49 -10.141 -0.005 -8.459 1.377 -1.557 -0.396 -1.722 D 81 79 3 82 3 0 0 29 47 -6.720 -1.081 -0.950 IR 82 82 3 82 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 27 ] - 34 - G - - MR 83 82 3 85 5 1 1 29 48 -8.823 -0.012 -8.638 -8.850 -9.742 -1.313 -2.507 1.653 -1.851 D 84 82 3 85 5 0 0 28 47 -5.352 -0.707 -2.978 -4.409 -2.404 IR 85 85 3 85 5 1 1 30 48 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 16 33 C G - - MP 86 85 3 90 6 2 2 28 47 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -5.739 -5.637 -5.464 -0.682 -4.082 -5.936 3.474 -4.874 -5.438 -1.406 -5.770 -3.415 1.344 -5.793 -0.044 -4.203 ML 87 85 3 90 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 88 85 3 90 6 1 1 27 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 89 85 3 90 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 90 90 5 90 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 91 91 6 91 5 1 1 28 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 17 32 C G - - MP 92 91 6 96 6 2 2 26 45 -10.171 -6.032 -0.031 -8.887 -9.167 -9.562 -5.104 -4.924 -5.004 -0.435 -3.810 -5.669 3.215 -2.246 -4.929 -0.656 -5.365 -2.627 1.955 -5.248 -0.424 -3.697 ML 93 91 6 96 6 1 1 25 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 94 91 6 96 6 1 1 25 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 95 91 6 96 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 96 96 5 96 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 97 97 6 97 5 1 1 26 44 -2.646 -0.409 -6.157 -4.325 -5.431 0.000 0.000 0.000 0.000 [ MATP 30 ] 18 30 c g - - MP 98 97 6 102 6 2 2 24 43 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -4.193 -4.044 -4.253 0.689 -3.382 -5.093 2.966 -3.982 -4.176 0.834 -4.702 -1.834 1.417 -4.423 -0.207 -1.062 ML 99 97 6 102 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 100 97 6 102 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 101 97 6 102 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 102 102 5 102 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 103 103 6 103 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 19 29 g c - - MP 104 103 6 108 6 2 2 22 41 -10.171 -5.356 -0.045 -8.887 -9.167 -9.562 -3.853 -3.154 -3.854 1.216 -3.969 -4.579 1.539 -4.181 -4.047 2.710 -4.472 -0.128 0.667 -3.859 -0.272 -1.693 ML 105 103 6 108 6 1 1 22 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 106 103 6 108 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 107 103 6 108 6 0 0 20 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 108 108 5 108 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 109 109 6 109 5 1 1 22 40 -2.779 -0.368 -6.290 -4.458 -5.564 0.000 0.000 0.000 0.000 [ MATP 32 ] 20 27 u a - - MP 110 109 6 114 6 2 2 20 39 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -2.859 -2.976 -3.024 0.269 -0.254 -3.873 1.718 -3.200 -3.056 1.591 -3.617 -0.335 2.061 -3.171 0.355 -0.913 ML 111 109 6 114 6 1 1 21 39 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 112 109 6 114 6 1 1 21 39 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 113 109 6 114 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 114 114 5 114 6 1 1 21 39 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 115 115 6 115 5 1 1 20 39 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 21 26 C G - - MP 116 115 6 120 4 2 2 18 37 -8.896 -9.103 -0.014 -7.517 -4.611 -4.393 -4.610 0.054 -3.569 -5.403 3.225 -1.765 -4.514 1.115 -5.011 -2.079 0.855 -4.801 -0.609 -3.292 ML 117 115 6 120 4 1 1 20 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 118 115 6 120 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 119 115 6 120 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 120 120 5 120 4 1 1 22 40 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 121 121 6 121 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 22 - G - - - ML 122 121 6 124 3 1 1 15 33 -9.833 -0.006 -8.487 -2.026 -3.223 1.831 -3.487 D 123 121 6 124 3 0 0 16 34 -6.174 -1.687 -0.566 IL 124 124 3 124 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 23 - A - - - ML 125 124 3 127 3 1 1 13 32 -9.833 -0.006 -8.487 1.131 -0.683 -2.172 -0.050 D 126 124 3 127 3 0 0 15 33 -6.174 -1.687 -0.566 IL 127 127 3 127 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 24 - A - - - ML 128 127 3 130 3 1 1 12 30 -9.833 -0.006 -8.487 1.335 -1.051 -0.372 -2.167 D 129 127 3 130 3 0 0 13 32 -6.174 -1.687 -0.566 IL 130 130 3 130 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 25 - A - - - ML 131 130 3 133 2 1 1 1 1 * 0.000 1.934 -4.572 -4.416 -3.456 D 132 130 3 133 2 0 0 0 0 * 0.000 IL 133 133 3 133 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 38 ] - - - - - - E 134 133 3 -1 0 0 0 0 0 [ BEGR 39 ] - - - - - - S 135 54 1 136 3 0 1 471 978 -9.833 -0.006 -8.487 IL 136 136 2 136 3 1 1 472 979 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 39 - G - - - ML 137 136 2 139 3 1 2 471 978 -9.833 -0.006 -8.487 -4.533 -6.111 1.970 -5.267 D 138 136 2 139 3 0 0 468 975 -6.174 -1.687 -0.566 IL 139 139 3 139 3 1 1 471 978 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 40 - A - - - ML 140 139 3 142 5 1 1 470 977 -3.390 -0.154 -8.638 -8.850 -9.742 1.515 -0.670 -1.646 -2.367 D 141 139 3 142 5 0 0 467 974 -4.959 -0.803 -4.221 -2.596 -2.508 IL 142 142 3 142 5 1 1 470 977 -1.789 -0.584 -5.327 -7.159 -6.433 0.000 0.000 0.000 0.000 [ MATP 42 ] 43 174 A U - - MP 143 142 3 147 6 2 2 469 975 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -5.719 0.446 -5.899 3.751 -7.870 -9.055 -3.354 -5.934 -5.475 -1.034 -6.139 -1.675 -3.359 -7.186 -5.202 -4.507 ML 144 142 3 147 6 1 1 466 973 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 145 142 3 147 6 1 1 466 973 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 146 142 3 147 6 0 0 461 968 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 147 147 5 147 6 1 1 468 974 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 148 148 6 148 5 1 1 467 974 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 44 173 G C - - MP 149 148 6 153 6 2 2 467 973 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -4.651 0.296 -4.510 1.122 -5.649 -5.135 -0.760 -5.141 -2.429 3.109 -5.121 1.150 -1.016 -4.405 -2.758 -3.454 ML 150 148 6 153 6 1 1 464 971 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 151 148 6 153 6 1 1 464 971 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 152 148 6 153 6 0 0 460 967 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 153 153 5 153 6 1 1 466 972 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 154 154 6 154 5 1 1 465 972 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 45 172 C G - - MP 155 154 6 159 6 2 2 465 971 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -5.155 -4.965 -5.044 -0.893 -3.832 -5.701 3.492 -4.548 -4.968 -0.683 -5.398 -0.788 0.622 -5.293 -0.121 -2.042 ML 156 154 6 159 6 1 1 463 970 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 157 154 6 159 6 1 1 462 969 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 158 154 6 159 6 0 0 460 966 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 159 159 5 159 6 1 1 464 971 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 160 160 6 160 5 1 1 464 970 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 46 171 c g - - MP 161 160 6 165 4 2 2 463 969 -8.896 -3.650 -0.132 -7.517 -1.242 -2.484 -1.764 0.737 0.879 -3.334 2.144 -2.783 -1.948 0.369 -3.110 -1.088 1.404 -2.625 0.753 -1.714 ML 162 160 6 165 4 1 1 461 968 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 163 160 6 165 4 1 1 460 967 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 164 160 6 165 4 0 0 459 966 -4.568 -4.250 -2.265 -0.520 IL 165 165 5 165 4 1 1 462 969 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 166 166 6 166 3 1 1 462 969 -2.162 -0.430 -4.862 0.000 0.000 0.000 0.000 [ MATL 46 ] 47 - A - - - ML 167 166 6 169 5 1 1 461 967 -5.427 -0.121 -4.217 -8.850 -9.742 1.266 -0.912 -1.030 -0.802 D 168 166 6 169 5 0 0 458 965 -4.959 -0.803 -4.221 -2.596 -2.508 IL 169 169 3 169 5 1 1 461 967 -2.666 -0.402 -4.345 -6.177 -5.451 0.000 0.000 0.000 0.000 [ MATP 47 ] 49 169 c g - - MP 170 169 3 174 6 2 2 460 966 -6.486 -10.054 -0.025 -8.831 -9.110 -9.505 -3.852 -3.797 -3.943 0.474 -3.232 -0.353 2.809 -3.798 -3.902 0.526 -4.435 -1.750 1.795 -4.109 -0.128 -2.817 ML 171 169 3 174 6 1 1 458 965 -0.938 -7.642 -2.356 -2.050 -7.491 -5.021 0.292 -0.177 -0.143 -0.022 MR 172 169 3 174 6 1 1 457 964 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 173 169 3 174 6 0 0 453 960 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 174 174 5 174 6 1 1 459 965 -3.571 -3.833 -0.333 -5.489 -6.265 -5.925 0.000 0.000 0.000 0.000 IR 175 175 6 175 5 1 1 458 965 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 48 ] 51 168 G C - - MP 176 175 6 180 6 2 2 458 964 -10.171 -10.110 -0.010 -8.887 -9.167 -9.562 -4.007 -2.062 -3.938 1.289 -4.617 -4.601 0.435 -4.509 -2.186 3.065 -4.606 -0.481 0.841 -2.237 -2.108 -2.973 ML 177 175 6 180 6 1 1 455 962 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 178 175 6 180 6 1 1 456 962 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 179 175 6 180 6 0 0 452 959 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 180 180 5 180 6 1 1 457 964 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 181 181 6 181 5 1 1 457 963 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 52 167 G C - - MP 182 181 6 186 4 2 2 456 962 -8.722 -9.968 -0.022 -6.421 -4.394 -3.085 -4.234 1.184 -5.284 -4.839 -0.447 -1.553 -4.643 3.350 -2.378 -0.419 -0.709 -1.764 -2.436 -3.208 ML 183 181 6 186 4 1 1 454 961 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 184 181 6 186 4 1 1 454 961 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 185 181 6 186 4 0 0 451 958 -12.737 -14.007 -2.036 -0.404 IL 186 186 5 186 4 1 1 454 961 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 187 187 6 187 3 1 1 455 962 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 50 ] - 166 - G - - MR 188 187 6 190 3 1 1 454 960 -10.154 -0.005 -8.471 -0.828 -4.134 1.723 -3.651 D 189 187 6 190 3 0 0 451 957 -6.390 -1.568 -0.620 IR 190 190 3 190 3 1 1 454 961 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 51 ] - 165 - A - - MR 191 190 3 193 5 1 1 453 959 -8.823 -0.162 -8.638 -8.850 -3.336 1.002 -0.408 -1.170 -0.322 D 192 190 3 193 5 0 0 449 956 -5.352 -0.707 -2.978 -4.409 -2.404 IR 193 193 3 193 5 1 1 453 959 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 52 ] 53 164 g c - - MP 194 193 3 198 6 2 2 452 959 -10.062 -10.001 -0.011 -8.777 -9.057 -9.452 -2.665 -0.977 -3.270 1.197 -3.486 -3.013 0.394 -3.269 -0.134 2.121 -0.048 1.623 0.175 -2.944 -1.342 -1.538 ML 195 193 3 198 6 1 1 444 951 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 196 193 3 198 6 1 1 441 948 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 197 193 3 198 6 0 0 443 950 -10.892 -9.590 -5.387 -6.069 -6.087 -0.082 IL 198 198 5 198 6 1 1 450 957 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 199 199 6 199 5 1 1 450 957 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 53 ] 54 163 u a - - MP 200 199 6 204 6 2 2 451 957 -10.062 -4.232 -0.089 -8.777 -9.057 -9.452 -4.728 -4.557 -4.682 -0.537 -2.115 -5.404 2.423 -4.262 -4.605 0.097 -5.070 -2.286 2.825 -4.901 -0.052 -3.394 ML 201 199 6 204 6 1 1 434 941 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 202 199 6 204 6 1 1 430 937 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 203 199 6 204 6 0 0 443 950 -10.892 -9.590 -5.387 -6.069 -6.087 -0.082 IL 204 204 5 204 6 1 1 448 954 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 205 205 6 205 5 1 1 448 955 -3.089 -0.289 -6.600 -4.768 -5.874 0.000 0.000 0.000 0.000 [ MATP 54 ] 55 161 c g - - MP 206 205 6 210 4 2 2 449 955 -0.926 -2.433 -1.824 -7.359 -4.265 -4.256 -4.290 -0.557 -3.463 -5.022 2.990 -2.099 -4.273 -0.429 -0.844 -2.276 1.340 -4.493 1.392 -3.194 ML 207 205 6 210 4 1 1 402 909 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 208 205 6 210 4 1 1 393 900 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 209 205 6 210 4 0 0 444 951 -6.341 -0.468 -4.038 -2.293 IL 210 210 5 210 4 1 1 457 964 -0.273 -2.622 -6.760 -10.497 0.000 0.000 0.000 0.000 IR 211 211 6 211 3 1 1 452 959 -0.052 -4.820 -11.708 0.000 0.000 0.000 0.000 [ MATL 55 ] 64 - u - - - ML 212 211 6 214 3 1 1 22 40 -9.833 -0.006 -8.487 0.101 0.022 -1.066 0.520 D 213 211 6 214 3 0 0 21 40 -6.174 -1.687 -0.566 IL 214 214 3 214 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 56 ] 65 - u - - - ML 215 214 3 217 3 1 1 21 39 -9.833 -0.035 -5.438 -0.265 0.207 -0.963 0.586 D 216 214 3 217 3 0 0 20 39 -6.174 -1.687 -0.566 IL 217 217 3 217 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 66 - u - - - ML 218 217 3 220 3 1 1 20 38 -9.804 -0.006 -8.458 0.269 -0.578 -0.349 0.422 D 219 217 3 220 3 0 0 19 38 -6.927 -2.440 -0.309 IL 220 220 3 220 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 67 - a - - - ML 221 220 3 223 3 1 1 18 37 -9.804 -0.077 -4.296 0.568 0.056 -1.549 0.184 D 222 220 3 223 3 0 0 18 36 -6.927 -2.440 -0.309 IL 223 223 3 223 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 68 - a - - - ML 224 223 3 226 3 1 1 17 36 -9.733 -0.144 -3.411 0.331 -0.619 0.297 -0.214 D 225 223 3 226 3 0 0 16 35 -7.886 -3.399 -0.150 IL 226 226 3 226 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 60 ] 69 - u - - - ML 227 226 3 229 3 1 1 16 35 -9.595 -0.243 -2.700 0.182 -0.386 -0.472 0.464 D 228 226 3 229 3 0 0 15 33 -8.793 -4.306 -0.078 IL 229 229 3 229 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 70 - a - - - ML 230 229 3 232 3 1 1 15 34 -9.360 -0.188 -3.049 0.165 -0.201 -0.124 0.125 D 231 229 3 232 3 0 0 13 32 -9.560 -5.073 -0.045 IL 232 232 3 232 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 71 - g - - - ML 233 232 3 235 3 1 1 14 32 -9.180 -0.082 -4.217 0.468 -1.337 0.656 -0.631 D 234 232 3 235 3 0 0 12 30 -9.908 -5.421 -0.036 IL 235 235 3 235 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 72 - g - - - ML 236 235 3 238 3 1 1 12 31 -9.107 -0.080 -4.260 0.087 -0.159 0.359 -0.396 D 237 235 3 238 3 0 0 11 29 -10.018 -5.531 -0.033 IL 238 238 3 238 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 73 - c - - - ML 239 238 3 241 2 1 1 1 1 * 0.000 0.091 0.313 -0.971 0.242 D 240 238 3 241 2 0 0 0 0 * 0.000 IL 241 241 3 241 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 65 ] - - - - - - E 242 241 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME c-di-GMP-I-GGC ACC RF03167 DESC c-di-GMP-I-GGC riboswitch LENG 78 MAXL 553 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Wed Jul 1 10:33:27 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 38 EFFN 37.039795 CKSUM 4073917778 STATS LOCAL MSV -8.7022 0.71872 STATS LOCAL VITERBI -9.2647 0.71872 STATS LOCAL FORWARD -3.8485 0.71872 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31907 1.35925 1.22284 1.70721 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 0.00000 * 1 1.54107 0.80624 2.27917 1.43993 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 2 1.28310 1.18345 1.69452 1.45708 2 c - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 3 1.76005 0.75886 3.31754 1.12848 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 4 2.08488 1.46828 0.58118 2.45201 4 G - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 5 0.68340 2.19034 1.35268 2.08204 5 A - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 6 0.95449 1.07908 2.82928 1.53235 6 a - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 7 0.19648 2.70983 3.29843 2.59170 7 A - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 8 0.32843 4.36240 1.85724 2.19736 8 A - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 9 0.40001 2.53658 1.73107 2.61105 9 A - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 10 5.54207 6.75212 0.00743 6.06654 10 G - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 11 3.33940 1.17349 0.45227 3.95939 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.02182 5.91135 3.96994 1.46634 0.26236 1.09861 0.40547 12 5.59845 0.13450 5.52526 2.13574 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.00552 5.89505 5.89505 1.46634 0.26236 0.25232 1.50058 13 0.15465 4.79367 2.21354 3.66166 13 A - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 14 0.21133 2.08370 2.94268 4.31967 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 15 0.11789 2.71311 3.41383 4.42626 15 A - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 16 3.59171 0.26747 5.03263 1.60638 16 C - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 17 3.66544 0.39015 4.37833 1.25559 17 C - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 18 2.37635 0.54946 2.24363 1.49710 18 C - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 19 1.94615 1.65528 0.67454 1.85312 19 G - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 20 3.31863 1.32151 1.30810 0.85159 20 u - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 21 3.10513 0.33169 1.97010 2.32251 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 22 3.04652 3.89018 0.07911 4.81617 22 G - - _ 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 23 0.50251 1.92859 3.97864 1.46565 23 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 24 0.39940 2.13919 1.61233 4.41409 24 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 25 0.02598 5.76465 5.65788 3.96251 25 A - - _ 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 26 2.64935 2.00641 0.32506 2.62630 26 G - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 27 0.96143 1.50646 1.27983 2.13812 27 a - - > 1.38629 1.38629 1.38629 1.38629 0.04185 3.26300 5.91135 0.13598 2.06246 1.09861 0.40547 28 2.47098 0.78020 1.40500 1.55204 29 c - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 29 1.92370 2.30883 0.47660 2.01239 30 G - - > 1.38629 1.38629 1.38629 1.38629 0.02755 3.71059 5.91135 0.20839 1.67071 1.09861 0.40547 30 1.39140 4.55440 0.35865 3.16686 32 G - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 31 1.92622 5.20272 0.19864 3.54195 33 G - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 32 2.52247 3.46063 0.18262 2.89593 34 G - - - 1.38629 1.38629 1.38629 1.38629 0.01534 5.91135 4.38080 1.46634 0.26236 1.09861 0.40547 33 0.35934 2.67057 1.63214 3.29312 35 A - - - 1.38629 1.38629 1.38629 1.38629 0.00549 5.90150 5.90150 1.46634 0.26236 0.35965 1.19706 34 1.96352 0.23089 4.95173 2.83469 36 C - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 35 2.90483 5.35172 0.06840 5.01882 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 36 3.17916 0.43011 1.25123 3.82643 38 C - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 37 5.54207 6.75212 0.00743 6.06654 39 G - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 38 0.28711 1.77808 2.70571 4.28407 40 A - - - 1.38629 1.38629 1.38629 1.38629 0.11731 2.22580 5.91135 0.47826 0.96722 1.09861 0.40547 39 0.02686 5.79937 3.96420 5.40629 43 A - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 40 1.50360 4.45250 0.28497 4.26961 44 G - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 41 5.03403 0.18134 3.14151 2.15314 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 42 2.18318 0.63657 2.75990 1.22107 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 43 0.41744 2.09725 2.20490 2.22362 47 A - - - 1.38629 1.38629 1.38629 1.38629 0.02961 3.63182 5.91135 0.19343 1.73802 1.09861 0.40547 44 2.49023 0.56969 2.46978 1.32123 49 C - - < 1.38629 1.38629 1.38629 1.38629 0.08148 2.58307 5.91135 0.07023 2.69092 1.09861 0.40547 45 1.84377 2.60429 0.47633 1.91892 51 G - - < 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 46 2.06003 2.94617 0.26119 2.99816 52 G - - < 1.38629 1.38629 1.38629 1.38629 0.12329 5.91135 2.17787 1.46634 0.26236 1.09861 0.40547 47 1.79997 3.63584 0.29145 2.79439 53 G - - < 1.38629 1.38629 1.38629 1.38629 0.00611 5.79417 5.79417 1.46634 0.26236 3.78019 0.02308 48 4.15606 1.03650 3.11355 0.53581 54 U - - < 1.38629 1.38629 1.38629 1.38629 0.00611 5.79417 5.79417 1.46634 0.26236 3.78019 0.02308 49 4.89131 0.50963 2.88389 1.09108 55 C - - < 1.38629 1.38629 1.38629 1.38629 0.84003 0.57048 5.79417 1.82005 0.17676 0.04671 3.08705 50 1.34522 1.31956 2.31017 0.98612 64 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 51 1.70239 1.17171 2.16813 0.93261 65 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02783 5.91135 3.69941 1.46634 0.26236 1.09861 0.40547 52 1.20420 1.85337 1.61128 1.06790 66 u - - _ 1.38629 1.38629 1.38629 1.38629 0.00555 5.88907 5.88907 1.46634 0.26236 2.40996 0.09411 53 0.92958 1.28866 2.91694 1.28901 67 a - - _ 1.38629 1.38629 1.38629 1.38629 0.05958 5.88907 2.89914 1.46634 0.26236 2.40996 0.09411 54 1.14062 1.86152 1.07865 1.68799 68 g - - _ 1.38629 1.38629 1.38629 1.38629 0.11131 5.83536 2.27870 1.46634 0.26236 3.40179 0.03388 55 1.28681 1.67325 1.72347 1.02787 69 u - - _ 1.38629 1.38629 1.38629 1.38629 0.18966 5.73056 1.77479 1.46634 0.26236 4.15988 0.01573 56 1.30837 1.47961 1.40010 1.36476 70 a - - _ 1.38629 1.38629 1.38629 1.38629 0.14998 5.54871 1.99965 1.46634 0.26236 4.74753 0.00871 57 1.01329 2.69196 0.79174 2.15267 71 g - - _ 1.38629 1.38629 1.38629 1.38629 0.06764 5.40773 2.79814 1.46634 0.26236 5.00448 0.00673 58 1.38964 1.39692 1.00251 1.99126 72 g - - _ 1.38629 1.38629 1.38629 1.38629 0.06645 5.34963 2.82108 1.46634 0.26236 0.34918 1.22167 59 1.35643 1.04188 2.24395 1.26021 73 c - - _ 1.38629 1.38629 1.38629 1.38629 2.74733 0.06968 5.74306 3.40648 0.03372 0.03379 3.40430 60 2.01907 4.87447 0.18129 3.67331 161 G - - > 1.38629 1.38629 1.38629 1.38629 0.20977 2.57775 2.17787 0.06986 2.69595 1.09861 0.40547 61 0.60759 3.19165 0.93042 3.91976 163 A - - > 1.38629 1.38629 1.38629 1.38629 0.00611 5.79417 5.79417 1.46634 0.26236 3.78019 0.02308 62 2.03188 1.07158 2.03418 0.92721 164 u - - > 1.38629 1.38629 1.38629 1.38629 0.00611 5.79417 5.79417 1.46634 0.26236 0.04671 3.08705 63 0.59992 1.66036 2.40558 1.76692 165 A - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 64 1.95077 5.60287 0.16398 5.22332 166 G - - - 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 65 3.88513 0.28546 3.14736 1.68835 167 C - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 66 1.95793 0.50035 2.54073 1.75028 168 C - - > 1.38629 1.38629 1.38629 1.38629 0.06543 5.91135 2.80305 1.46634 0.26236 1.09861 0.40547 67 1.50620 1.98681 0.57408 2.55244 169 G - - > 1.38629 1.38629 1.38629 1.38629 0.09848 2.39787 5.85169 0.06209 2.81003 0.08558 2.50074 68 0.95972 3.09980 0.72096 2.45740 171 g - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 69 2.96728 5.02528 0.12300 2.85216 172 G - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 70 3.69186 0.39110 4.26589 1.25623 173 C - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 71 5.63248 2.28637 5.62628 0.11520 174 U - - > 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 72 1.81556 5.51353 0.18940 5.15546 175 G - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 73 6.05223 0.00857 6.36665 5.41272 176 C - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 74 2.25819 0.43139 4.56934 1.44607 177 C - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 75 1.88664 4.26967 0.36099 1.98452 178 G - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 76 0.95563 1.37772 2.11596 1.41569 179 a - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 77 0.80690 2.62524 1.39188 1.45788 180 a - - : 1.38629 1.38629 1.38629 1.38629 0.00543 5.91135 5.91135 1.46634 0.26236 1.09861 0.40547 78 1.12322 1.38413 1.56227 1.53913 181 a - - : 1.38629 1.38629 1.38629 1.38629 0.00272 5.90864 * 1.46634 0.26236 0.00000 * //