INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-1206 ACC RF03236 DESC mir-1206 microRNA precursor family STATES 178 NODES 41 CLEN 58 W 74 ALPH RNA RF no CONS yes MAP yes DATE Thu Aug 20 02:26:38 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.3/miRNA_relabelled/batch1_chunk1_searches/MIPF0000634__mir-1206_relabelled/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 2 EFFN 1.675781 CKSUM 2319278611 NULL 0.000 0.000 0.000 0.000 GA 70.00 TC 70.10 NC 59.30 EFP7GF -5.3082 0.72670 ECMLC 0.64087 -5.60866 3.68981 1600000 464740 0.002582 ECMGC 0.44694 -16.36018 -2.10931 1600000 233456 0.001713 ECMLI 0.63346 -4.31958 4.72962 1600000 370405 0.003240 ECMGI 0.46035 -12.16241 0.71091 1600000 149901 0.002668 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 74 94 -6.766 -8.011 -0.087 -4.464 IL 1 1 2 1 4 1 4 75 95 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 5 76 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 1 ] - 58 - G - - MR 3 2 3 5 5 1 7 74 94 -7.007 -0.041 -6.822 -7.034 -7.926 -1.367 -2.552 1.669 -1.938 D 4 2 3 5 5 0 0 73 92 -5.352 -0.707 -2.978 -4.409 -2.404 IR 5 5 3 5 5 1 4 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 1 57 A U - - MP 6 5 3 10 6 2 8 73 93 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 7 5 3 10 6 1 2 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 8 5 3 10 6 1 2 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 9 5 3 10 6 0 0 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 10 10 5 10 6 1 3 73 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 11 11 6 11 5 1 3 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 2 56 G C - - MP 12 11 6 16 6 2 8 71 91 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 13 11 6 16 6 1 2 69 89 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 14 11 6 16 6 1 2 69 89 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 15 11 6 16 6 0 0 67 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 16 16 5 16 6 1 3 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 17 17 6 17 5 1 3 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 3 55 u g - - MP 18 17 6 22 6 2 7 69 89 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.890 -3.802 -3.638 -0.157 -2.460 -4.097 1.821 -3.213 -3.676 0.071 -3.990 -1.810 1.001 -3.994 2.866 -2.558 ML 19 17 6 22 6 1 2 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 20 17 6 22 6 1 2 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 21 17 6 22 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 22 22 5 22 6 1 3 69 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 23 23 6 23 5 1 3 68 88 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 4 54 G C - - MP 24 23 6 28 6 2 7 67 87 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 25 23 6 28 6 1 2 65 85 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 26 23 6 28 6 1 2 65 85 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 27 23 6 28 6 0 0 63 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 28 28 5 28 6 1 2 66 86 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 29 29 6 29 5 1 3 66 86 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 5 53 U A - - MP 30 29 6 34 6 2 6 65 85 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 31 29 6 34 6 1 1 63 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 32 29 6 34 6 1 1 63 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 33 29 6 34 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 34 34 5 34 6 1 2 64 84 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 35 35 6 35 5 1 2 64 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 6 52 U A - - MP 36 35 6 40 6 2 6 63 83 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 37 35 6 40 6 1 1 61 81 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 6 40 6 1 1 61 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 6 40 6 0 0 59 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 2 62 82 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 2 62 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 7 51 C G - - MP 42 41 6 46 6 2 5 61 81 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.350 -4.238 -4.073 -0.489 -2.836 -4.511 3.484 -3.626 -4.116 -0.218 -4.398 -2.183 0.697 -4.432 -0.539 -2.963 ML 43 41 6 46 6 1 1 59 79 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 1 59 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 2 61 80 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 2 60 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 8 50 A U - - MP 48 47 6 52 6 2 4 59 79 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 49 47 6 52 6 1 1 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 1 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 56 76 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 1 59 78 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 2 58 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 9 49 u g - - MP 54 53 6 58 4 2 2 57 77 -6.840 -7.047 -0.057 -5.461 -3.890 -3.802 -3.638 -0.157 -2.460 -4.097 1.821 -3.213 -3.676 0.071 -3.990 -1.810 1.001 -3.994 2.866 -2.558 ML 55 53 6 58 4 1 1 57 77 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 1 57 77 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 0 56 76 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 1 58 78 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 1 57 77 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 10 - G - - - ML 60 59 6 62 5 1 1 54 74 -7.007 -0.041 -6.822 -7.034 -7.926 -1.367 -2.552 1.669 -1.938 D 61 59 6 62 5 0 0 53 73 -4.959 -0.803 -4.221 -2.596 -2.508 IL 62 62 3 62 5 1 1 55 74 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 11 48 U A - - MP 63 62 3 67 6 2 3 53 73 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 64 62 3 67 6 1 1 52 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 1 52 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 0 50 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 53 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 53 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 12 47 A U - - MP 69 68 6 73 6 2 2 51 71 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 70 68 6 73 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 1 50 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 0 49 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 51 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 51 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 13 46 G C - - MP 75 74 6 79 4 2 2 49 69 -6.840 -7.047 -0.057 -5.461 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 76 74 6 79 4 1 1 50 70 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 1 49 69 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 0 48 68 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 1 1 51 71 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 1 50 70 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 14 - A - - - ML 81 80 6 83 3 1 1 47 66 -7.864 -0.022 -6.519 1.672 -2.171 -1.823 -1.694 D 82 80 6 83 3 0 0 46 65 -6.174 -1.687 -0.566 IL 83 83 3 83 3 1 1 49 69 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 15 - U - - - ML 84 83 3 86 3 1 1 46 65 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 85 83 3 86 3 0 0 45 64 -6.174 -1.687 -0.566 IL 86 86 3 86 3 1 1 48 68 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 16 - G - - - ML 87 86 3 89 3 1 1 45 64 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 88 86 3 89 3 0 0 43 63 -6.174 -1.687 -0.566 IL 89 89 3 89 3 1 1 47 67 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 17 - U - - - ML 90 89 3 92 3 1 1 44 63 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 91 89 3 92 3 0 0 42 62 -6.174 -1.687 -0.566 IL 92 92 3 92 3 1 1 46 65 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 18 - U - - - ML 93 92 3 95 3 1 1 43 62 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 94 92 3 95 3 0 0 41 61 -6.174 -1.687 -0.566 IL 95 95 3 95 3 1 1 45 64 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 19 - U - - - ML 96 95 3 98 3 1 1 42 61 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 97 95 3 98 3 0 0 40 60 -6.174 -1.687 -0.566 IL 98 98 3 98 3 1 1 44 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 20 - A - - - ML 99 98 3 101 3 1 1 40 60 -7.864 -0.022 -6.519 1.672 -2.171 -1.823 -1.694 D 100 98 3 101 3 0 0 39 58 -6.174 -1.687 -0.566 IL 101 101 3 101 3 1 1 43 62 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 21 - A - - - ML 102 101 3 104 3 1 1 39 58 -7.864 -0.022 -6.519 1.672 -2.171 -1.823 -1.694 D 103 101 3 104 3 0 0 38 57 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 1 42 61 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 22 - G - - - ML 105 104 3 107 3 1 1 38 57 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 106 104 3 107 3 0 0 37 56 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 1 41 60 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 23 - C - - - ML 108 107 3 110 3 1 1 37 56 -7.864 -0.022 -6.519 -1.501 1.553 -2.316 -0.965 D 109 107 3 110 3 0 0 36 55 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 1 40 59 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 24 - U - - - ML 111 110 3 113 5 1 1 36 55 -7.007 -0.041 -6.822 -7.034 -7.926 -1.304 -1.332 -2.027 1.562 D 112 110 3 113 5 0 0 35 54 -4.959 -0.803 -4.221 -2.596 -2.508 IL 113 113 3 113 5 1 1 36 55 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 25 45 C G - - MP 114 113 3 118 6 2 2 35 54 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.350 -4.238 -4.073 -0.489 -2.836 -4.511 3.484 -3.626 -4.116 -0.218 -4.398 -2.183 0.697 -4.432 -0.539 -2.963 ML 115 113 3 118 6 1 1 34 53 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 1 33 52 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 0 31 50 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 35 54 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 26 44 U A - - MP 120 119 6 124 6 2 2 33 52 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 121 119 6 124 6 1 1 32 51 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 33 52 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 27 43 U A - - MP 126 125 6 130 6 2 2 31 50 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.986 -3.804 -3.846 -0.114 -2.833 -4.429 1.490 -3.514 -3.853 0.172 -4.236 -1.709 3.221 -4.145 -0.514 -2.697 ML 127 125 6 130 6 1 1 30 49 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 31 50 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 28 42 G C - - MP 132 131 6 136 6 2 2 29 48 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.550 -3.003 -4.634 0.326 -4.963 -4.618 -0.374 -4.861 -4.200 3.589 -4.551 -0.696 -0.765 -4.342 -2.402 -3.513 ML 133 131 6 136 6 1 1 28 47 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 6 1 1 28 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 135 131 6 136 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 136 136 5 136 6 1 1 29 48 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 137 137 6 137 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 29 41 C G - - MP 138 137 6 142 6 2 2 27 46 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -4.350 -4.238 -4.073 -0.489 -2.836 -4.511 3.484 -3.626 -4.116 -0.218 -4.398 -2.183 0.697 -4.432 -0.539 -2.963 ML 139 137 6 142 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 140 137 6 142 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 141 137 6 142 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 142 142 5 142 6 1 1 27 46 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 143 143 6 143 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 30 40 A U - - MP 144 143 6 148 6 2 2 25 44 -9.067 -9.007 -0.022 -7.783 -8.063 -8.458 -3.631 -2.705 -3.660 3.216 -3.920 -4.968 0.370 -3.712 -3.559 1.252 -4.099 -0.208 -0.048 -4.182 -1.572 -2.504 ML 145 143 6 148 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 6 148 6 1 1 24 43 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 6 148 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 25 44 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 25 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 31 39 g u - - MP 150 149 6 154 4 2 2 23 42 -6.840 -7.047 -0.057 -5.461 -3.492 -2.310 -3.648 1.207 -4.262 -4.989 0.108 -3.689 -3.345 1.525 -3.860 2.939 -0.253 -4.222 -1.833 -2.376 ML 151 149 6 154 4 1 1 24 43 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 4 1 1 23 42 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 153 149 6 154 4 0 0 22 41 -4.568 -4.250 -2.265 -0.520 IL 154 154 5 154 4 1 1 25 44 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 155 155 6 155 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 32 - U - - - ML 156 155 6 158 3 1 1 20 39 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 157 155 6 158 3 0 0 19 38 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 33 - A - - - ML 159 158 3 161 3 1 1 19 38 -7.864 -0.022 -6.519 1.672 -2.171 -1.823 -1.694 D 160 158 3 161 3 0 0 18 37 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 34 - G - - - ML 162 161 3 164 3 1 1 18 36 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 163 161 3 164 3 0 0 17 36 -6.174 -1.687 -0.566 IL 164 164 3 164 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 35 - G - - - ML 165 164 3 167 3 1 1 16 35 -7.864 -0.022 -6.519 -1.367 -2.552 1.669 -1.938 D 166 164 3 167 3 0 0 16 34 -6.174 -1.687 -0.566 IL 167 167 3 167 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 36 - U - - - ML 168 167 3 170 3 1 1 15 33 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 169 167 3 170 3 0 0 15 33 -6.174 -1.687 -0.566 IL 170 170 3 170 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 37 - U - - - ML 171 170 3 173 3 1 1 13 32 -7.864 -0.022 -6.519 -1.304 -1.332 -2.027 1.562 D 172 170 3 173 3 0 0 13 32 -6.174 -1.687 -0.566 IL 173 173 3 173 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 38 - U - - - ML 174 173 3 176 2 1 1 1 1 * 0.000 -1.304 -1.332 -2.027 1.562 D 175 173 3 176 2 0 0 0 0 * 0.000 IL 176 176 3 176 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 40 ] - - - - - - E 177 176 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-1206 ACC RF03236 DESC mir-1206 microRNA precursor family LENG 58 MAXL 144 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Aug 20 02:26:38 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 2 EFFN 1.769531 CKSUM 2319278611 STATS LOCAL MSV -8.0500 0.72670 STATS LOCAL VITERBI -8.9547 0.72670 STATS LOCAL FORWARD -3.3318 0.72670 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.51085 1.64253 1.25472 1.20188 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 0.00000 * 1 0.48701 2.42841 1.58987 2.37078 1 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 2 2.39358 2.92628 0.22514 2.87001 2 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 3 2.66656 1.44099 2.42035 0.50265 3 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 4 2.39639 2.92914 0.22434 2.87412 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 5 2.66007 1.68085 2.37307 0.42979 5 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 6 2.66004 1.68085 2.37306 0.42979 6 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 7 2.90066 0.32517 2.63748 1.89002 7 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 8 0.48562 2.43183 1.59008 2.37620 8 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 9 2.66742 1.44095 2.42070 0.50252 9 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 10 2.38980 3.22077 0.21403 2.79518 10 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 11 2.66002 1.68085 2.37305 0.42980 11 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 12 0.48545 2.43225 1.59011 2.37688 12 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 13 2.39737 2.93012 0.22406 2.87555 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 14 0.21448 2.94347 2.69707 2.61798 14 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 15 2.33713 2.34863 2.84142 0.28828 15 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 16 2.38980 3.22077 0.21403 2.79518 16 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 17 2.33713 2.34863 2.84142 0.28828 17 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 18 2.33713 2.34863 2.84142 0.28828 18 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 19 2.33713 2.34863 2.84142 0.28828 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 20 0.21448 2.94347 2.69707 2.61798 20 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 21 0.21448 2.94347 2.69707 2.61798 21 A - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 22 2.38980 3.22077 0.21403 2.79518 22 G - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 23 2.48930 0.29029 3.05665 2.10422 23 C - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 24 2.33713 2.34863 2.84142 0.28828 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 25 2.90398 0.32467 2.63888 1.89054 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 26 2.66267 1.68087 2.37404 0.42937 26 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 27 2.66242 1.68087 2.37394 0.42941 27 U - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 28 2.39794 2.93071 0.22390 2.87639 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 29 2.90277 0.32486 2.63837 1.89035 29 C - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 30 0.48546 2.43225 1.59011 2.37687 30 A - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 31 1.79579 2.59451 0.39144 2.48605 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 32 2.33713 2.34863 2.84142 0.28828 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 33 0.21448 2.94347 2.69707 2.61798 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 34 2.38980 3.22077 0.21403 2.79518 34 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 35 2.38980 3.22077 0.21403 2.79518 35 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 36 2.33713 2.34863 2.84142 0.28828 36 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 37 2.33713 2.34863 2.84142 0.28828 37 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 38 2.33713 2.34863 2.84142 0.28828 38 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 39 2.70274 1.66271 2.39931 0.42683 39 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 40 2.60649 1.85102 2.24708 0.41034 40 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 41 2.16418 2.80439 0.28157 2.65901 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 42 3.08897 0.26277 2.76006 2.10170 42 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 43 0.48901 2.55110 1.51757 2.41320 43 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 44 0.48926 2.55035 1.51757 2.41218 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 45 2.16080 2.80035 0.28290 2.65376 45 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 46 3.08287 0.26353 2.75759 2.10051 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 47 2.59995 1.85059 2.24500 0.41151 47 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 48 0.49077 2.54572 1.51757 2.40589 48 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 49 1.94238 2.59279 0.36715 2.41779 49 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 50 2.60563 1.85096 2.24681 0.41050 50 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 51 2.16381 2.80395 0.28172 2.65844 51 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 52 0.48895 2.55129 1.51757 2.41346 52 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 53 0.48888 2.55152 1.51757 2.41377 53 A - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 54 3.09070 0.26256 2.76076 2.10204 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 55 1.94348 2.59417 0.36654 2.41955 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 56 3.09384 0.26217 2.76203 2.10265 56 C - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 57 2.61046 1.85128 2.24834 0.40964 57 U - - > 1.38629 1.38629 1.38629 1.38629 0.04879 3.73767 3.73767 1.46634 0.26236 1.09861 0.40547 58 2.38980 3.22077 0.21403 2.79518 58 G - - : 1.38629 1.38629 1.38629 1.38629 0.02469 3.71357 * 1.46634 0.26236 0.00000 * //