INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-1205 ACC RF03289 DESC mir-1205 microRNA precursor family STATES 193 NODES 44 CLEN 63 W 79 ALPH RNA RF no CONS yes MAP yes DATE Thu Aug 20 07:03:39 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.3/miRNA_relabelled/batch1_chunk1_searches/MIPF0000609__mir-1205_relabelled/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 3 EFFN 1.491211 CKSUM 4079085222 NULL 0.000 0.000 0.000 0.000 GA 75.00 TC 85.80 NC 71.20 EFP7GF -9.3883 0.71924 ECMLC 0.68567 -5.03568 3.30800 1600000 366263 0.003276 ECMGC 0.44281 -16.32875 -3.02946 1600000 144431 0.002769 ECMLI 0.67273 -3.49318 4.48989 1600000 257952 0.004652 ECMGI 0.49255 -11.06219 -0.04653 1600000 90872 0.004402 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 79 99 -6.756 -6.963 -0.325 -2.439 IL 1 1 2 1 4 1 17 83 103 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 16 82 102 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - G - - - ML 3 2 3 5 3 1 15 79 99 -7.557 -0.027 -6.211 -0.729 -1.792 1.415 -1.179 D 4 2 3 5 3 0 12 78 97 -7.315 -0.541 -1.707 IL 5 5 3 5 3 1 15 81 101 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - A - - - ML 6 5 3 8 3 1 15 78 97 -8.190 -0.021 -6.508 1.630 -2.018 -1.685 -1.528 D 7 5 3 8 3 0 9 77 96 -5.620 -0.734 -1.403 IL 8 8 3 8 3 1 13 79 98 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 63 - U - - MR 9 8 3 11 3 1 14 77 96 -8.190 -0.021 -6.508 -1.166 -1.220 -1.881 1.513 D 10 8 3 11 3 0 7 75 95 -6.390 -1.568 -0.620 IR 11 11 3 11 3 1 13 78 97 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 62 - G - - MR 12 11 3 14 5 1 14 76 95 -6.940 -0.043 -6.756 -6.968 -7.859 -1.202 -2.359 1.619 -1.743 D 13 11 3 14 5 0 6 74 94 -5.352 -0.707 -2.978 -4.409 -2.404 IR 14 14 3 14 5 1 11 76 96 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 61 A U - - MP 15 14 3 19 6 2 14 75 94 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.514 -2.620 -3.550 3.115 -3.753 -4.794 0.530 -3.608 -3.456 1.380 -3.990 -0.146 0.111 -4.027 -1.413 -2.403 ML 16 14 3 19 6 1 8 73 93 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 3 19 6 1 7 73 93 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 3 19 6 0 3 71 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 10 75 94 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 10 74 94 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 60 G C - - MP 21 20 6 25 6 2 12 73 92 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.399 -2.932 -4.473 0.423 -4.750 -4.555 -0.198 -4.687 -4.095 3.544 -4.458 -0.621 -0.594 -4.241 -2.218 -3.356 ML 22 20 6 25 6 1 7 71 91 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 6 71 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 3 69 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 9 73 92 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 9 72 92 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 59 g u - - MP 27 26 6 31 6 2 11 71 90 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.399 -2.258 -3.545 1.257 -4.082 -4.817 0.267 -3.601 -3.272 1.650 -3.783 2.810 -0.094 -4.064 -1.673 -2.296 ML 28 26 6 31 6 1 6 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 1 5 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 2 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 1 8 71 90 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 1 8 70 90 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 6 58 C G - - MP 33 32 6 37 4 2 9 69 88 -6.756 -6.963 -0.061 -5.377 -4.198 -4.070 -3.945 -0.338 -2.746 -4.402 3.425 -3.520 -3.985 -0.040 -4.281 -2.014 0.801 -4.289 -0.446 -2.838 ML 34 32 6 37 4 1 5 69 89 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 4 1 3 69 88 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 36 32 6 37 4 0 2 68 87 -4.568 -4.250 -2.265 -0.520 IL 37 37 5 37 4 1 7 70 90 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 38 38 6 38 3 1 7 69 89 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 7 - C - - - ML 39 38 6 41 5 1 8 66 86 -6.940 -0.043 -6.756 -6.968 -7.859 -1.321 1.488 -2.127 -0.822 D 40 38 6 41 5 0 2 65 85 -4.959 -0.803 -4.221 -2.596 -2.508 IL 41 41 3 41 5 1 5 67 86 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 57 U A - - MP 42 41 3 46 6 2 8 65 85 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.838 -3.649 -3.714 0.029 -2.735 -4.309 1.584 -3.405 -3.723 0.343 -4.113 -1.558 3.128 -4.001 -0.420 -2.579 ML 43 41 3 46 6 1 3 64 83 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 3 46 6 1 3 64 83 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 3 46 6 0 0 61 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 4 65 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 5 65 84 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 56 C G - - MP 48 47 6 52 6 2 6 63 83 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.198 -4.070 -3.945 -0.338 -2.746 -4.402 3.425 -3.520 -3.985 -0.040 -4.281 -2.014 0.801 -4.289 -0.446 -2.838 ML 49 47 6 52 6 1 2 62 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 2 62 81 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 0 60 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 4 63 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 4 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 55 u g - - MP 54 53 6 58 4 2 4 61 81 -6.689 -7.935 -0.092 -4.388 -3.739 -3.644 -3.521 -0.015 -2.395 -4.006 1.881 -3.132 -3.558 0.241 -3.888 -1.656 1.085 -3.857 2.743 -2.448 ML 55 53 6 58 4 1 1 61 80 -2.408 -4.532 -1.293 -1.473 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 2 60 80 -4.102 -12.528 -0.390 -2.485 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 0 58 78 -12.737 -14.007 -2.036 -0.404 IL 58 58 5 58 4 1 2 61 80 -2.817 -4.319 -0.613 -2.698 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 3 61 81 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 54 - U - - MR 60 59 6 62 3 1 4 59 79 -8.190 -0.021 -6.508 -1.166 -1.220 -1.881 1.513 D 61 59 6 62 3 0 0 58 77 -6.390 -1.568 -0.620 IR 62 62 3 62 3 1 2 60 80 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 53 - C - - MR 63 62 3 65 3 1 3 58 78 -8.190 -0.021 -6.508 -1.321 1.488 -2.127 -0.822 D 64 62 3 65 3 0 0 57 76 -6.390 -1.568 -0.620 IR 65 65 3 65 3 1 2 59 79 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 52 - U - - MR 66 65 3 68 5 1 3 57 77 -6.940 -0.043 -6.756 -6.968 -7.859 -1.166 -1.220 -1.881 1.513 D 67 65 3 68 5 0 0 56 75 -5.352 -0.707 -2.978 -4.409 -2.404 IR 68 68 3 68 5 1 1 58 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 11 51 g u - - MP 69 68 3 73 6 2 4 56 76 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.399 -2.258 -3.545 1.257 -4.082 -4.817 0.267 -3.601 -3.272 1.650 -3.783 2.810 -0.094 -4.064 -1.673 -2.296 ML 70 68 3 73 6 1 1 55 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 3 73 6 1 1 55 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 3 73 6 0 0 52 72 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 56 76 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 56 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 12 50 C G - - MP 75 74 6 79 6 2 4 54 74 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.198 -4.070 -3.945 -0.338 -2.746 -4.402 3.425 -3.520 -3.985 -0.040 -4.281 -2.014 0.801 -4.289 -0.446 -2.838 ML 76 74 6 79 6 1 1 53 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 53 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 50 70 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 54 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 54 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 18 ] 13 49 A U - - MP 81 80 6 85 6 2 4 52 72 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.514 -2.620 -3.550 3.115 -3.753 -4.794 0.530 -3.608 -3.456 1.380 -3.990 -0.146 0.111 -4.027 -1.413 -2.403 ML 82 80 6 85 6 1 1 51 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 51 70 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 48 68 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 52 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 52 71 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 14 48 G C - - MP 87 86 6 91 6 2 3 50 70 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.399 -2.932 -4.473 0.423 -4.750 -4.555 -0.198 -4.687 -4.095 3.544 -4.458 -0.621 -0.594 -4.241 -2.218 -3.356 ML 88 86 6 91 6 1 1 49 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 49 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 90 86 6 91 6 0 0 46 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 50 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 50 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 15 47 G C - - MP 93 92 6 97 6 2 3 48 68 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.399 -2.932 -4.473 0.423 -4.750 -4.555 -0.198 -4.687 -4.095 3.544 -4.458 -0.621 -0.594 -4.241 -2.218 -3.356 ML 94 92 6 97 6 1 1 47 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 95 92 6 97 6 1 1 47 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 96 92 6 97 6 0 0 44 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 48 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 48 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 16 46 G C - - MP 99 98 6 103 6 2 3 46 66 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.399 -2.932 -4.473 0.423 -4.750 -4.555 -0.198 -4.687 -4.095 3.544 -4.458 -0.621 -0.594 -4.241 -2.218 -3.356 ML 100 98 6 103 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 45 64 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 102 98 6 103 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 46 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 46 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 17 45 U A - - MP 105 104 6 109 6 2 3 44 64 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.838 -3.649 -3.714 0.029 -2.735 -4.309 1.584 -3.405 -3.723 0.343 -4.113 -1.558 3.128 -4.001 -0.420 -2.579 ML 106 104 6 109 6 1 1 44 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 108 104 6 109 6 0 0 42 61 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 44 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 44 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 23 ] 18 44 U A - - MP 111 110 6 115 4 2 2 42 62 -6.756 -6.963 -0.061 -5.377 -3.838 -3.649 -3.714 0.029 -2.735 -4.309 1.584 -3.405 -3.723 0.343 -4.113 -1.558 3.128 -4.001 -0.420 -2.579 ML 112 110 6 115 4 1 1 43 62 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 4 1 1 42 62 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 114 110 6 115 4 0 0 41 61 -4.568 -4.250 -2.265 -0.520 IL 115 115 5 115 4 1 1 44 64 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 116 116 6 116 3 1 1 43 63 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 19 - U - - - ML 117 116 6 119 3 1 1 40 59 -8.190 -0.021 -6.508 -1.166 -1.220 -1.881 1.513 D 118 116 6 119 3 0 0 39 58 -5.620 -0.734 -1.403 IL 119 119 3 119 3 1 1 41 60 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 25 ] - 43 - C - - MR 120 119 3 122 5 1 1 39 58 -6.940 -0.043 -6.756 -6.968 -7.859 -1.321 1.488 -2.127 -0.822 D 121 119 3 122 5 0 0 38 57 -5.352 -0.707 -2.978 -4.409 -2.404 IR 122 122 3 122 5 1 1 39 58 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 20 42 g u - - MP 123 122 3 127 6 2 2 38 57 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.399 -2.258 -3.545 1.257 -4.082 -4.817 0.267 -3.601 -3.272 1.650 -3.783 2.810 -0.094 -4.064 -1.673 -2.296 ML 124 122 3 127 6 1 1 37 56 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 3 127 6 1 1 37 56 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 3 127 6 0 0 35 55 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 38 57 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 37 56 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 21 41 C G - - MP 129 128 6 133 4 2 2 36 55 -6.756 -6.963 -0.061 -5.377 -4.198 -4.070 -3.945 -0.338 -2.746 -4.402 3.425 -3.520 -3.985 -0.040 -4.281 -2.014 0.801 -4.289 -0.446 -2.838 ML 130 128 6 133 4 1 1 36 56 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 4 1 1 36 55 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 132 128 6 133 4 0 0 35 54 -4.568 -4.250 -2.265 -0.520 IL 133 133 5 133 4 1 1 38 57 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 134 134 6 134 3 1 1 37 56 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 22 - U - - - ML 135 134 6 137 3 1 1 33 52 -7.787 -0.023 -6.441 -1.166 -1.220 -1.881 1.513 D 136 134 6 137 3 0 0 32 51 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 1 36 55 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 23 - U - - - ML 138 137 3 140 3 1 1 32 51 -7.787 -0.023 -6.441 -1.166 -1.220 -1.881 1.513 D 139 137 3 140 3 0 0 31 50 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 1 35 54 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 24 - U - - - ML 141 140 3 143 3 1 1 31 50 -8.190 -0.021 -6.508 -1.166 -1.220 -1.881 1.513 D 142 140 3 143 3 0 0 30 49 -5.620 -0.734 -1.403 IL 143 143 3 143 3 1 1 32 51 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 31 ] - 40 - U - - MR 144 143 3 146 3 1 1 30 49 -8.190 -0.021 -6.508 -1.166 -1.220 -1.881 1.513 D 145 143 3 146 3 0 0 28 47 -6.390 -1.568 -0.620 IR 146 146 3 146 3 1 1 31 50 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 32 ] - 39 - C - - MR 147 146 3 149 3 1 1 29 48 -8.190 -0.021 -6.508 -1.321 1.488 -2.127 -0.822 D 148 146 3 149 3 0 0 27 46 -6.390 -1.568 -0.620 IR 149 149 3 149 3 1 1 30 49 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 33 ] - 38 - C - - MR 150 149 3 152 5 1 1 28 47 -6.940 -0.043 -6.756 -6.968 -7.859 -1.321 1.488 -2.127 -0.822 D 151 149 3 152 5 0 0 27 45 -5.352 -0.707 -2.978 -4.409 -2.404 IR 152 152 3 152 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 25 37 g u - - MP 153 152 3 157 6 2 2 27 46 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.399 -2.258 -3.545 1.257 -4.082 -4.817 0.267 -3.601 -3.272 1.650 -3.783 2.810 -0.094 -4.064 -1.673 -2.296 ML 154 152 3 157 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 3 157 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 3 157 6 0 0 23 42 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 27 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 26 36 A U - - MP 159 158 6 163 6 2 2 25 44 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -3.514 -2.620 -3.550 3.115 -3.753 -4.794 0.530 -3.608 -3.456 1.380 -3.990 -0.146 0.111 -4.027 -1.413 -2.403 ML 160 158 6 163 6 1 1 24 43 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 24 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 25 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 24 43 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 27 35 G C - - MP 165 164 6 169 6 2 2 23 42 -9.037 -8.977 -0.022 -7.753 -8.033 -8.428 -4.399 -2.932 -4.473 0.423 -4.750 -4.555 -0.198 -4.687 -4.095 3.544 -4.458 -0.621 -0.594 -4.241 -2.218 -3.356 ML 166 164 6 169 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 21 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 23 42 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 28 34 G C - - MP 171 170 6 175 4 2 2 21 40 -6.756 -6.963 -0.061 -5.377 -4.399 -2.932 -4.473 0.423 -4.750 -4.555 -0.198 -4.687 -4.095 3.544 -4.458 -0.621 -0.594 -4.241 -2.218 -3.356 ML 172 170 6 175 4 1 1 22 41 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 174 170 6 175 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 175 175 5 175 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 176 176 6 176 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 29 - U - - - ML 177 176 6 179 3 1 1 18 36 -7.787 -0.023 -6.441 -1.166 -1.220 -1.881 1.513 D 178 176 6 179 3 0 0 17 36 -6.174 -1.687 -0.566 IL 179 179 3 179 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 30 - A - - - ML 180 179 3 182 3 1 1 16 35 -7.787 -0.023 -6.441 1.630 -2.018 -1.685 -1.528 D 181 179 3 182 3 0 0 16 34 -6.174 -1.687 -0.566 IL 182 182 3 182 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 31 - C - - - ML 183 182 3 185 3 1 1 15 33 -7.787 -0.023 -6.441 -1.321 1.488 -2.127 -0.822 D 184 182 3 185 3 0 0 15 33 -6.174 -1.687 -0.566 IL 185 185 3 185 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 32 - U - - - ML 186 185 3 188 3 1 1 13 32 -7.787 -0.023 -6.441 -1.166 -1.220 -1.881 1.513 D 187 185 3 188 3 0 0 13 32 -6.174 -1.687 -0.566 IL 188 188 3 188 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 42 ] 33 - U - - - ML 189 188 3 191 2 1 1 1 1 * 0.000 -1.166 -1.220 -1.881 1.513 D 190 188 3 191 2 0 0 0 0 * 0.000 IL 191 191 3 191 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 43 ] - - - - - - E 192 191 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-1205 ACC RF03289 DESC mir-1205 microRNA precursor family LENG 63 MAXL 149 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Aug 20 07:03:39 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 3 EFFN 2.129883 CKSUM 4079085222 STATS LOCAL MSV -7.9737 0.71924 STATS LOCAL VITERBI -8.8536 0.71924 STATS LOCAL FORWARD -3.4313 0.71924 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.80190 1.33446 1.33608 1.17493 1.38629 1.38629 1.38629 1.38629 0.24578 3.84117 1.62739 1.46634 0.26236 0.00000 * 1 2.17670 2.97035 0.27875 2.54374 1 G - - : 1.38629 1.38629 1.38629 1.38629 0.05345 3.64883 3.64883 1.46634 0.26236 0.19768 1.71831 2 0.17366 3.13459 2.86901 2.82777 2 A - - : 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 3 0.38853 2.64466 1.74208 2.58017 3 A - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 4 2.51689 3.13053 0.18727 3.07103 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 5 1.87310 2.79118 0.33444 2.66984 5 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 6 3.08941 0.26773 2.85137 2.02807 6 C - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 7 2.71937 0.22887 3.29365 2.28740 7 C - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 8 2.85536 1.81871 2.59222 0.34902 8 U - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 9 3.09082 0.26755 2.85202 2.02831 9 C - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 10 2.84485 1.52635 2.62216 0.42789 10 U - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 11 1.87060 2.78635 0.33602 2.66336 11 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 12 3.08335 0.26848 2.84859 2.02704 12 C - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 13 0.38814 2.64591 1.74226 2.58202 13 A - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 14 2.51707 3.13074 0.18722 3.07133 14 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 15 2.51713 3.13080 0.18721 3.07141 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 16 2.51699 3.13064 0.18724 3.07119 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 17 2.85260 1.81860 2.59106 0.34940 17 U - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 18 2.85227 1.81859 2.59092 0.34944 18 U - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 19 2.51235 2.49306 3.02555 0.23859 19 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 20 1.87259 2.79019 0.33476 2.66851 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 21 3.08977 0.26768 2.85154 2.02813 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 22 2.51235 2.49306 3.02555 0.23859 22 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 23 2.51235 2.49306 3.02555 0.23859 23 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 24 2.51235 2.49306 3.02555 0.23859 24 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 25 1.87265 2.79031 0.33472 2.66867 25 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 26 0.38786 2.64684 1.74240 2.58341 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 27 2.51857 3.13243 0.18686 3.07370 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 28 2.51843 3.13227 0.18689 3.07348 28 G - - < 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 29 2.51235 2.49306 3.02555 0.23859 29 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 30 0.17366 3.13459 2.86901 2.82777 30 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 31 2.71937 0.22887 3.29365 2.28740 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 32 2.51235 2.49306 3.02555 0.23859 32 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 33 2.51235 2.49306 3.02555 0.23859 33 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 34 3.28385 0.22017 2.96637 2.21967 34 C - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 35 3.28669 0.21989 2.96758 2.22022 35 C - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 36 2.81727 2.02499 2.46181 0.32441 36 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 37 2.89262 1.82081 2.59617 0.34515 37 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 38 2.71937 0.22887 3.29365 2.28740 38 C - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 39 2.71937 0.22887 3.29365 2.28740 39 C - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 40 2.51235 2.49306 3.02555 0.23859 40 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 41 2.30733 3.02266 0.23054 2.85256 41 G - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 42 2.89252 1.82081 2.59613 0.34516 42 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 43 2.71937 0.22887 3.29365 2.28740 43 C - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 44 0.39675 2.77277 1.65549 2.60357 44 A - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 45 0.39669 2.77301 1.65551 2.60387 45 A - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 46 3.27798 0.22076 2.96385 2.21855 46 C - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 47 3.27935 0.22062 2.96444 2.21881 47 C - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 48 3.28107 0.22045 2.96518 2.21914 48 C - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 49 2.81319 2.02458 2.46036 0.32499 49 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 50 2.30614 3.02110 0.23092 2.85063 50 G - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 51 2.88936 1.82069 2.59486 0.34557 51 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 52 2.51235 2.49306 3.02555 0.23859 52 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 53 2.71937 0.22887 3.29365 2.28740 53 C - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 54 2.51235 2.49306 3.02555 0.23859 54 U - - - 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 55 2.05389 2.79570 0.30725 2.58725 55 G - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 56 2.30095 3.01431 0.23261 2.84226 56 G - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 57 0.39799 2.76785 1.65514 2.59737 57 A - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 58 2.30513 3.01978 0.23125 2.84900 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 59 2.88638 1.82058 2.59366 0.34596 59 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 60 3.28874 0.21968 2.96845 2.22061 60 C - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 61 2.81892 2.02516 2.46240 0.32417 61 U - - > 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 62 2.59174 3.45418 0.16823 3.02959 62 G - - : 1.38629 1.38629 1.38629 1.38629 0.04389 3.84117 3.84117 1.46634 0.26236 1.09861 0.40547 63 2.51235 2.49306 3.02555 0.23859 63 U - - : 1.38629 1.38629 1.38629 1.38629 0.02218 3.81947 * 1.46634 0.26236 0.00000 * //