INFERNAL1/a [1.1.4 | Dec 2020] NAME mir-1343 ACC RF03525 DESC mir-1343 microRNA precursor family STATES 250 NODES 55 CLEN 82 W 100 ALPH RNA RF no CONS yes MAP yes DATE Thu Jul 23 16:17:48 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmcalibrate --cpu 8 /hps/nobackup/production/xfam/rfam/RELEASES/14.3/miRNA_relabelled_seeds/batch1_chunk2_searches/MIPF0001206__mir-1343_relabelled/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 8 EFFN 0.847656 CKSUM 867515458 NULL 0.000 0.000 0.000 0.000 GA 51.00 TC 51.40 NC 50.70 EFP7GF -7.8874 0.71910 ECMLC 0.56847 -6.21153 3.49699 1600000 299254 0.004010 ECMGC 0.37531 -16.40952 -2.26548 1600000 80813 0.004950 ECMLI 0.54429 -4.04309 5.13517 1600000 177321 0.006767 ECMGI 0.42520 -9.51801 2.01816 1600000 53992 0.007409 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 100 120 -6.418 -6.625 -0.279 -2.701 IL 1 1 2 1 4 1 31 103 124 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 30 103 123 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - c - - - ML 3 2 3 5 3 1 30 100 120 -7.310 -0.033 -5.964 -0.372 0.868 -1.104 -0.094 D 4 2 3 5 3 0 26 98 119 -6.968 -2.481 -0.299 IL 5 5 3 5 3 1 30 101 122 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - U - - - ML 6 5 3 8 3 1 29 99 119 -7.754 -0.083 -4.293 -0.394 -0.627 -1.037 1.073 D 7 5 3 8 3 0 25 98 118 -6.152 -0.674 -1.477 IL 8 8 3 8 3 1 29 100 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 3 ] - 83 - G - - MR 9 8 3 11 3 1 28 98 118 -7.811 -0.027 -6.129 -0.385 -1.367 1.175 -0.766 D 10 8 3 11 3 0 23 96 117 -6.869 -2.047 -0.416 IR 11 11 3 11 3 1 28 99 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 82 - c - - MR 12 11 3 14 5 1 28 97 117 -6.593 -0.105 -6.408 -4.544 -7.512 -0.482 0.977 -1.224 -0.172 D 13 11 3 14 5 0 23 96 116 -5.640 -0.757 -2.358 -4.697 -2.692 IR 14 14 3 14 5 1 26 97 118 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 3 81 G C - - MP 15 14 3 19 6 2 27 96 116 -8.892 -8.832 -0.025 -7.608 -7.888 -8.283 -3.636 -2.581 -3.689 0.888 -3.672 -4.199 0.722 -3.801 -3.509 3.187 -3.935 -0.267 0.287 -3.721 -1.272 -2.581 ML 16 14 3 19 6 1 24 95 115 -6.438 -6.784 -1.070 -1.193 -6.634 -4.164 0.256 -0.623 0.316 -0.133 MR 17 14 3 19 6 1 23 94 115 -7.158 -5.887 -1.323 -5.866 -0.999 -4.079 0.145 0.126 -0.532 0.152 D 18 14 3 19 6 0 18 92 113 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 19 19 5 19 6 1 25 96 116 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 1 25 95 116 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 4 80 G C - - MP 21 20 6 25 6 2 26 94 114 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.586 -2.508 -3.655 0.968 -3.897 -4.230 0.510 -3.875 -3.513 3.183 -3.950 0.165 0.173 -3.671 -1.470 -2.559 ML 22 20 6 25 6 1 22 93 114 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 1 21 93 113 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 18 91 112 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 1 24 94 114 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 1 24 93 114 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 7 ] 5 79 C G - - MP 27 26 6 31 4 2 24 92 112 -6.418 -6.625 -0.077 -5.039 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 28 26 6 31 4 1 21 92 113 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 4 1 19 91 112 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 30 26 6 31 4 0 18 90 111 -4.568 -4.250 -2.265 -0.520 IL 31 31 5 31 4 1 23 93 114 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 32 32 6 32 3 1 22 92 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 6 - u - - - ML 33 32 6 35 5 1 22 90 110 -6.680 -0.052 -6.496 -6.708 -7.600 -0.177 -0.620 -0.268 0.709 D 34 32 6 35 5 0 17 88 109 -4.959 -0.803 -4.221 -2.596 -2.508 IL 35 35 3 35 5 1 21 90 110 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 7 78 u g - - MP 36 35 3 40 6 2 22 89 109 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.252 -3.113 -3.136 0.465 -2.199 -3.704 2.059 -2.871 -3.171 0.838 -3.551 -1.130 1.357 -3.404 2.123 -2.085 ML 37 35 3 40 6 1 18 87 107 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 38 35 3 40 6 1 17 87 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 39 35 3 40 6 0 13 85 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 40 40 5 40 6 1 20 88 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 41 41 6 41 5 1 20 88 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 8 77 C G - - MP 42 41 6 46 6 2 20 87 107 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 43 41 6 46 6 1 17 85 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 44 41 6 46 6 1 16 85 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 45 41 6 46 6 0 12 83 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 46 46 5 46 6 1 18 86 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 47 47 6 47 5 1 18 86 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 9 76 G C - - MP 48 47 6 52 6 2 18 85 105 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.572 -2.500 -3.642 0.977 -3.886 -4.225 0.518 -3.863 -3.504 3.174 -3.942 0.195 0.182 -3.661 -1.461 -2.546 ML 49 47 6 52 6 1 16 84 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 50 47 6 52 6 1 14 83 104 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 51 47 6 52 6 0 12 82 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 52 52 5 52 6 1 17 84 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 53 53 6 53 5 1 17 84 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 10 75 G C - - MP 54 53 6 58 4 2 16 83 103 -6.418 -6.625 -0.077 -5.039 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 55 53 6 58 4 1 15 83 103 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 56 53 6 58 4 1 13 82 103 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 57 53 6 58 4 0 11 81 102 -4.568 -4.250 -2.265 -0.520 IL 58 58 5 58 4 1 16 84 104 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 59 59 6 59 3 1 15 83 104 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 13 ] 11 - U - - - ML 60 59 6 62 3 1 14 80 100 -7.907 -0.026 -6.225 -0.657 -0.818 -1.329 1.263 D 61 59 6 62 3 0 11 79 99 -5.620 -0.734 -1.403 IL 62 62 3 62 3 1 14 81 101 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 74 - U - - MR 63 62 3 65 5 1 14 79 99 -6.680 -0.052 -6.496 -6.708 -7.600 -0.657 -0.818 -1.329 1.263 D 64 62 3 65 5 0 9 78 98 -5.352 -0.707 -2.978 -4.409 -2.404 IR 65 65 3 65 5 1 12 80 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 12 73 G C - - MP 66 65 3 70 6 2 13 78 98 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 67 65 3 70 6 1 10 77 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 68 65 3 70 6 1 8 77 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 69 65 3 70 6 0 5 75 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 70 70 5 70 6 1 11 78 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 71 71 6 71 5 1 11 78 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 13 72 C G - - MP 72 71 6 76 4 2 11 76 96 -6.418 -6.625 -0.077 -5.039 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 73 71 6 76 4 1 9 76 97 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 74 71 6 76 4 1 6 76 96 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 75 71 6 76 4 0 5 75 95 -4.568 -4.250 -2.265 -0.520 IL 76 76 5 76 4 1 10 78 98 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 77 77 6 77 3 1 10 77 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 14 - U - - - ML 78 77 6 80 3 1 10 74 94 -7.907 -0.026 -6.225 -0.452 -0.379 -1.152 1.036 D 79 77 6 80 3 0 4 73 93 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 8 75 95 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 71 - C - - MR 81 80 3 83 5 1 9 73 93 -6.680 -0.052 -6.496 -6.708 -7.600 -0.675 1.138 -1.435 -0.317 D 82 80 3 83 5 0 3 71 91 -5.352 -0.707 -2.978 -4.409 -2.404 IR 83 83 3 83 5 1 7 73 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 19 ] 15 70 g c - - MP 84 83 3 88 6 2 10 72 92 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -2.457 -1.863 -2.641 1.300 -2.698 -3.359 1.211 -2.846 -2.566 1.976 -1.261 1.426 0.908 -2.755 -0.581 -1.663 ML 85 83 3 88 6 1 4 70 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 86 83 3 88 6 1 4 70 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 87 83 3 88 6 0 0 68 88 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 88 88 5 88 6 1 6 71 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 89 89 6 89 5 1 6 71 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 20 ] 16 69 G C - - MP 90 89 6 94 6 2 8 70 90 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.286 -1.101 -3.354 1.050 -3.594 -3.965 0.646 -3.651 -3.324 3.074 -3.760 -0.152 0.341 -3.359 -1.263 -2.337 ML 91 89 6 94 6 1 4 68 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 6 94 6 1 3 68 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 6 94 6 0 0 66 86 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 5 69 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 5 69 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 17 68 g u - - MP 96 95 6 100 6 2 7 68 88 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.089 -2.130 -3.203 1.391 -3.477 -4.265 0.805 -3.307 -3.039 2.056 -3.541 2.145 0.441 -3.550 -1.130 -2.040 ML 97 95 6 100 6 1 3 67 87 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 2 67 87 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 0 65 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 4 68 88 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 4 67 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 18 67 G C - - MP 102 101 6 106 4 2 5 66 86 -6.418 -6.625 -0.077 -5.039 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 103 101 6 106 4 1 2 66 86 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 4 1 1 65 86 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 105 101 6 106 4 0 0 64 85 -4.568 -4.250 -2.265 -0.520 IL 106 106 5 106 4 1 4 67 87 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 107 107 6 107 3 1 3 66 86 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 19 - A - - - ML 108 107 6 110 3 1 4 63 83 -7.907 -0.026 -6.225 1.405 -1.438 -1.160 -0.904 D 109 107 6 110 3 0 0 62 82 -5.620 -0.734 -1.403 IL 110 110 3 110 3 1 2 64 84 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 66 - A - - MR 111 110 3 113 5 1 3 62 82 -6.680 -0.052 -6.496 -6.708 -7.600 1.405 -1.438 -1.160 -0.904 D 112 110 3 113 5 0 0 61 81 -5.352 -0.707 -2.978 -4.409 -2.404 IR 113 113 3 113 5 1 1 63 82 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 20 65 G C - - MP 114 113 3 118 6 2 5 61 81 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 115 113 3 118 6 1 1 60 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 3 118 6 1 1 60 80 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 3 118 6 0 0 57 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 1 61 81 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 1 61 80 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 21 64 C G - - MP 120 119 6 124 6 2 4 59 79 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 121 119 6 124 6 1 1 58 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 6 1 1 58 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 123 119 6 124 6 0 0 56 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 124 124 5 124 6 1 1 59 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 125 125 6 125 5 1 1 59 78 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 22 63 G C - - MP 126 125 6 130 6 2 4 57 77 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 127 125 6 130 6 1 1 56 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 128 125 6 130 6 1 1 56 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 129 125 6 130 6 0 0 54 74 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 130 130 5 130 6 1 1 57 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 131 131 6 131 5 1 1 57 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 23 62 G C - - MP 132 131 6 136 4 2 2 55 75 -6.418 -6.625 -0.077 -5.039 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 133 131 6 136 4 1 1 56 75 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 134 131 6 136 4 1 1 55 75 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 135 131 6 136 4 0 0 54 74 -4.568 -4.250 -2.265 -0.520 IL 136 136 5 136 4 1 1 57 77 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 137 137 6 137 3 1 1 56 76 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 24 - c - - - ML 138 137 6 140 3 1 1 53 72 -7.907 -0.026 -6.225 -0.458 0.809 -1.210 0.122 D 139 137 6 140 3 0 0 52 71 -5.620 -0.734 -1.403 IL 140 140 3 140 3 1 1 54 73 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 30 ] - 61 - C - - MR 141 140 3 143 5 1 1 52 71 -6.680 -0.052 -6.496 -6.708 -7.600 -0.675 1.138 -1.435 -0.317 D 142 140 3 143 5 0 0 51 70 -5.352 -0.707 -2.978 -4.409 -2.404 IR 143 143 3 143 5 1 1 52 72 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 25 60 c g - - MP 144 143 3 148 6 2 2 51 70 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.421 -3.291 -3.288 0.353 -2.287 -3.832 2.920 -2.988 -3.326 0.739 -3.692 -1.300 1.327 -3.542 0.476 -2.210 ML 145 143 3 148 6 1 1 49 69 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 146 143 3 148 6 1 1 49 69 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 147 143 3 148 6 0 0 47 66 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 148 148 5 148 6 1 1 51 70 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 149 149 6 149 5 1 1 50 70 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 26 59 C G - - MP 150 149 6 154 6 2 2 49 68 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 151 149 6 154 6 1 1 47 67 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 152 149 6 154 6 1 1 47 67 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 153 149 6 154 6 0 0 45 64 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 154 154 5 154 6 1 1 49 68 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 155 155 6 155 5 1 1 48 68 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 27 58 C G - - MP 156 155 6 160 6 2 2 47 66 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 157 155 6 160 6 1 1 45 65 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 158 155 6 160 6 1 1 45 65 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 159 155 6 160 6 0 0 43 62 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 160 160 5 160 6 1 1 47 66 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 161 161 6 161 5 1 1 46 66 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 28 57 C G - - MP 162 161 6 166 6 2 2 45 64 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 163 161 6 166 6 1 1 43 63 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 164 161 6 166 6 1 1 43 63 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 165 161 6 166 6 0 0 41 60 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 166 166 5 166 6 1 1 45 64 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 167 167 6 167 5 1 1 44 64 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 29 56 g u - - MP 168 167 6 172 6 2 2 43 62 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.089 -2.130 -3.203 1.391 -3.477 -4.265 0.805 -3.307 -3.039 2.056 -3.541 2.145 0.441 -3.550 -1.130 -2.040 ML 169 167 6 172 6 1 1 41 61 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 170 167 6 172 6 1 1 41 61 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 171 167 6 172 6 0 0 39 58 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 172 172 5 172 6 1 1 43 62 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 173 173 6 173 5 1 1 42 62 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 36 ] 30 55 G C - - MP 174 173 6 178 6 2 2 41 60 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 175 173 6 178 6 1 1 40 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 176 173 6 178 6 1 1 39 59 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 177 173 6 178 6 0 0 37 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 178 178 5 178 6 1 1 41 60 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 179 179 6 179 5 1 1 40 60 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 31 54 G C - - MP 180 179 6 184 4 2 2 39 58 -3.912 -6.625 -0.163 -5.039 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 181 179 6 184 4 1 1 38 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 182 179 6 184 4 1 1 38 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 183 179 6 184 4 0 0 37 56 -4.568 -4.250 -2.265 -0.520 IL 184 184 5 184 4 1 1 39 59 -1.907 -2.591 -0.895 -5.076 0.000 0.000 0.000 0.000 IR 185 185 6 185 3 1 1 39 58 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 33 - c - - - ML 186 185 6 188 3 1 1 36 55 -7.907 -0.026 -6.225 -0.485 0.864 -1.239 0.059 D 187 185 6 188 3 0 0 34 53 -5.620 -0.734 -1.403 IL 188 188 3 188 3 1 1 36 55 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 39 ] - 53 - U - - MR 189 188 3 191 3 1 1 35 54 -7.907 -0.026 -6.225 -0.657 -0.818 -1.329 1.263 D 190 188 3 191 3 0 0 33 52 -6.390 -1.568 -0.620 IR 191 191 3 191 3 1 1 35 54 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 40 ] - 52 - C - - MR 192 191 3 194 5 1 1 34 53 -6.680 -0.052 -6.496 -6.708 -7.600 -0.675 1.138 -1.435 -0.317 D 193 191 3 194 5 0 0 32 51 -5.352 -0.707 -2.978 -4.409 -2.404 IR 194 194 3 194 5 1 1 34 53 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 34 51 G C - - MP 195 194 3 199 6 2 2 33 52 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.337 -1.259 -3.403 1.029 -3.645 -3.998 0.619 -3.696 -3.362 3.104 -3.795 -0.167 0.311 -3.400 -1.299 -2.378 ML 196 194 3 199 6 1 1 31 50 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 197 194 3 199 6 1 1 31 50 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 3 199 6 0 0 29 48 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 32 51 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 32 51 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 35 50 G C - - MP 201 200 6 205 6 2 2 31 50 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 202 200 6 205 6 1 1 29 48 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 203 200 6 205 6 1 1 29 48 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 204 200 6 205 6 0 0 27 46 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 30 49 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 30 49 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 36 49 G C - - MP 207 206 6 211 6 2 2 29 48 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.823 -2.666 -3.879 0.776 -3.939 -4.294 0.489 -4.021 -3.662 3.304 -4.073 -0.351 0.067 -3.849 -1.509 -2.769 ML 208 206 6 211 6 1 1 27 46 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 209 206 6 211 6 1 1 27 46 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 210 206 6 211 6 0 0 25 44 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 211 211 5 211 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 28 47 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 37 48 C G - - MP 213 212 6 217 6 2 2 27 46 -8.928 -8.867 -0.024 -7.643 -7.923 -8.318 -3.673 -3.468 -3.497 0.197 -2.449 -4.017 3.137 -3.160 -3.530 0.633 -3.870 -1.402 1.134 -3.789 -0.147 -2.404 ML 214 212 6 217 6 1 1 26 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 215 212 6 217 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 26 45 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 45 ] 38 47 c g - - MP 219 218 6 223 4 2 2 25 44 -6.418 -6.625 -0.077 -5.039 -3.386 -3.260 -3.260 0.379 -2.270 -3.810 2.881 -2.967 -3.297 0.761 -3.668 -1.274 1.347 -3.511 0.566 -2.184 ML 220 218 6 223 4 1 1 25 44 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 221 218 6 223 4 1 1 25 44 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 222 218 6 223 4 0 0 24 43 -4.568 -4.250 -2.265 -0.520 IL 223 223 5 223 4 1 1 26 46 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 224 224 6 224 3 1 1 25 44 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 39 - U - - - ML 225 224 6 227 3 1 1 22 40 -7.480 -0.029 -6.134 -0.657 -0.818 -1.329 1.263 D 226 224 6 227 3 0 0 20 39 -6.174 -1.687 -0.566 IL 227 227 3 227 3 1 1 24 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 40 - C - - - ML 228 227 3 230 3 1 1 20 39 -7.480 -0.029 -6.134 -0.675 1.138 -1.435 -0.317 D 229 227 3 230 3 0 0 19 38 -6.174 -1.687 -0.566 IL 230 230 3 230 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 41 - U - - - ML 231 230 3 233 3 1 1 19 38 -7.480 -0.029 -6.134 -0.433 -0.320 -1.135 1.002 D 232 230 3 233 3 0 0 18 37 -6.174 -1.687 -0.566 IL 233 233 3 233 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 42 - G - - - ML 234 233 3 236 3 1 1 18 37 -7.480 -0.029 -6.134 -0.580 -1.609 1.324 -0.999 D 235 233 3 236 3 0 0 17 36 -6.174 -1.687 -0.566 IL 236 236 3 236 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 43 - C - - - ML 237 236 3 239 3 1 1 17 35 -7.480 -0.029 -6.134 -0.675 1.138 -1.435 -0.317 D 238 236 3 239 3 0 0 16 35 -6.174 -1.687 -0.566 IL 239 239 3 239 3 1 1 20 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 44 - U - - - ML 240 239 3 242 3 1 1 15 34 -7.480 -0.029 -6.134 -0.657 -0.818 -1.329 1.263 D 241 239 3 242 3 0 0 15 33 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 45 - C - - - ML 243 242 3 245 3 1 1 13 32 -7.480 -0.029 -6.134 -0.675 1.138 -1.435 -0.317 D 244 242 3 245 3 0 0 13 32 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 46 - U - - - ML 246 245 3 248 2 1 1 1 1 * 0.000 -0.433 -0.320 -1.135 1.002 D 247 245 3 248 2 0 0 0 0 * 0.000 IL 248 248 3 248 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 54 ] - - - - - - E 249 248 3 -1 0 0 0 0 0 // HMMER3/f [3.3.2 | Nov 2020] NAME mir-1343 ACC RF03525 DESC mir-1343 microRNA precursor family LENG 82 MAXL 176 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Thu Jul 23 16:17:48 2020 COM [1] /nfs/production/xfam/rfam/rfam_rh74/software/bin/cmbuild -F CM SEED NSEQ 8 EFFN 1.597656 CKSUM 867515458 STATS LOCAL MSV -8.5311 0.71910 STATS LOCAL VITERBI -9.7878 0.71910 STATS LOCAL FORWARD -3.1427 0.71910 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 2.03886 1.07661 1.14407 1.55801 1.38629 1.38629 1.38629 1.38629 0.24462 3.74046 1.64376 1.46634 0.26236 0.00000 * 1 1.98213 0.51094 2.51947 1.70489 1 C - - : 1.38629 1.38629 1.38629 1.38629 0.05888 3.55472 3.55472 1.46634 0.26236 2.31641 0.10384 2 1.94604 2.03339 2.42183 0.45019 2 U - - : 1.38629 1.38629 1.38629 1.38629 0.05888 3.55472 3.55472 1.46634 0.26236 0.56621 0.83857 3 2.16838 2.56173 0.31959 2.50082 3 G - - < 1.38629 1.38629 1.38629 1.38629 0.05165 3.68220 3.68220 1.46634 0.26236 0.46443 0.99019 4 2.10153 2.66731 0.31403 2.55369 4 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 5 2.78654 0.36206 2.52215 1.82116 5 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 6 1.64823 1.94453 1.58893 0.77563 6 u - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 7 2.57850 1.40124 2.31962 0.54557 7 U - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 8 2.80835 0.35837 2.53099 1.82447 8 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 9 2.10692 2.67287 0.31142 2.56493 9 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 10 2.33643 2.82499 0.24648 2.77306 10 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 11 2.24990 2.27720 2.74898 0.31742 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 12 2.33443 2.82308 0.24710 2.77026 12 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 13 2.80982 0.35813 2.53158 1.82469 13 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 14 1.94419 1.73849 2.44973 0.51954 14 U - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 15 1.71064 2.00201 0.62445 1.90629 15 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 16 1.83147 2.52844 0.40085 2.40471 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 17 1.76112 2.49744 0.42361 2.39498 17 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 18 2.33771 2.82621 0.24608 2.77485 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 19 0.23907 2.84674 2.61008 2.51231 19 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 20 2.33479 2.82342 0.24699 2.77076 20 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 21 2.81021 0.35806 2.53174 1.82474 21 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 22 2.33757 2.82607 0.24613 2.77465 22 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 23 2.33765 2.82615 0.24610 2.77476 23 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 24 1.98583 0.61451 2.54079 1.41460 24 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 25 2.52574 0.56899 2.26075 1.38777 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 26 2.81020 0.35807 2.53174 1.82474 26 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 27 2.81151 0.35785 2.53226 1.82494 27 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 28 2.81166 0.35782 2.53232 1.82496 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 29 1.76104 2.49733 0.42367 2.39482 29 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 30 2.33721 2.82573 0.24624 2.77415 30 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 31 2.33694 2.82547 0.24632 2.77377 31 G - - < 1.38629 1.38629 1.38629 1.38629 0.13091 2.31308 3.74046 0.42581 1.05913 1.09861 0.40547 32 2.02902 0.56641 2.58585 1.48879 33 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 33 1.87768 2.55434 0.38353 2.43203 34 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 34 2.33638 2.82494 0.24649 2.77300 35 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 35 2.33727 2.82578 0.24622 2.77423 36 G - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 36 2.81129 0.35788 2.53217 1.82491 37 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 37 2.50125 0.60026 2.23562 1.33780 38 C - - < 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 38 2.24990 2.27720 2.74898 0.31742 39 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 39 2.37450 0.32802 2.93676 2.01325 40 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 40 1.91921 1.67549 2.42628 0.54871 41 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 41 2.28616 3.09952 0.24302 2.67335 42 G - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 42 2.37450 0.32802 2.93676 2.01325 43 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 43 2.24990 2.27720 2.74898 0.31742 44 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 44 2.37450 0.32802 2.93676 2.01325 45 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 45 1.91921 1.67549 2.42628 0.54871 46 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 46 1.81061 2.39656 0.44370 2.26568 47 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 47 2.09886 2.69879 0.30996 2.56864 48 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 48 2.99629 0.28716 2.65677 2.04435 49 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 49 2.99828 0.28689 2.65754 2.04474 50 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 50 2.67073 0.40397 2.37542 1.77101 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 51 2.37450 0.32802 2.93676 2.01325 52 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 52 2.24990 2.27720 2.74898 0.31742 53 U - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 53 2.99139 0.28783 2.65486 2.04340 54 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 54 2.99237 0.28770 2.65525 2.04359 55 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 55 2.61516 1.58546 2.30435 0.47455 56 U - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 56 2.09897 2.69892 0.30991 2.56881 57 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 57 2.09949 2.69951 0.30969 2.56960 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 58 2.10012 2.70022 0.30942 2.57055 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 59 1.83292 2.42433 0.42957 2.29535 60 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 60 2.37450 0.32802 2.93676 2.01325 61 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 61 2.99501 0.28734 2.65627 2.04410 62 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 62 2.99675 0.28710 2.65695 2.04444 63 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 63 2.10012 2.70022 0.30942 2.57056 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 64 3.00134 0.28648 2.65873 2.04533 65 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 65 0.23907 2.84674 2.61008 2.51231 66 A - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 66 2.99513 0.28732 2.65632 2.04412 67 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 67 2.61725 1.58542 2.30508 0.47420 68 U - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 68 2.64002 0.41638 2.34630 1.75164 69 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 69 2.12822 1.45241 1.60877 0.80562 70 u - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 70 2.37450 0.32802 2.93676 2.01325 71 C - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 71 2.10005 2.70014 0.30945 2.57044 72 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 72 3.00104 0.28652 2.65861 2.04527 73 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 73 2.24990 2.27720 2.74898 0.31742 74 U - - - 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 74 2.98511 0.28870 2.65241 2.04217 75 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 75 2.78095 0.40444 2.49080 1.67223 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 76 2.09251 2.69161 0.31270 2.55900 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 77 1.88196 2.48353 0.40598 2.32341 78 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 78 2.07739 2.67455 0.31933 2.53618 79 G - - > 1.38629 1.38629 1.38629 1.38629 0.04865 3.74046 3.74046 1.46634 0.26236 1.09861 0.40547 79 2.71085 0.41111 2.46960 1.68209 80 C - - > 1.38629 1.38629 1.38629 1.38629 0.10755 3.74046 2.54813 1.46634 0.26236 1.09861 0.40547 80 2.63216 0.38375 2.37943 1.86968 81 C - - > 1.38629 1.38629 1.38629 1.38629 0.11315 3.68443 2.50261 1.46634 0.26236 1.66671 0.20932 81 2.12559 0.43216 2.67335 1.81700 82 C - - : 1.38629 1.38629 1.38629 1.38629 0.05472 3.62600 3.62600 1.46634 0.26236 2.02222 0.14198 82 2.05396 2.82405 0.32648 2.39747 83 G - - : 1.38629 1.38629 1.38629 1.38629 0.10049 2.34755 * 0.49841 0.93520 0.00000 * //