INFERNAL1/a [1.1 | October 2013] NAME right_angle-3 DESC Right angle motif 3 STATES 255 NODES 69 CLEN 82 W 281 ALPH RNA RF no CONS yes MAP yes DATE Fri May 30 15:57:55 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/right_angle-3/CM /share/data/people/ppg15/motifs/right_angle-3/SEED COM [2] /share/data/bin/cmcalibrate --mpi --seed 1 /share/data/people/ppg15/motifs/right_angle-3/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 16 EFFN 2.925781 CKSUM 1249646082 NULL 0.000 0.000 0.000 0.000 GA 20.00 EFP7GF -10.9591 0.71876 ECMLC 0.64733 -5.60042 3.12917 1600000 341456 0.003514 ECMGC 0.37554 -18.67790 -4.89099 1600000 70901 0.005642 ECMLI 0.57796 -3.82381 5.42592 1600000 251706 0.004767 ECMGI 0.43064 -12.11867 -1.00503 1600000 47927 0.008346 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 6 0 1 281 535 -9.255 -9.195 -0.065 -7.971 -8.251 -4.912 IL 1 1 2 1 6 3 29 282 537 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 2 2 3 2 5 3 29 282 537 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 1 ] 1 127 c g - - MP 3 2 3 7 6 6 33 281 536 -9.210 -9.150 -0.020 -7.926 -8.206 -8.601 -3.296 -2.976 -3.319 0.702 -2.742 -4.068 2.167 -3.259 -3.353 2.014 -3.826 -0.852 1.769 -3.449 -0.390 -2.225 ML 4 2 3 7 6 2 27 279 533 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 5 2 3 7 6 2 26 278 533 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 6 2 3 7 6 0 22 274 528 -9.705 -8.404 -2.232 -4.883 -4.900 -0.483 IL 7 7 5 7 6 3 28 280 535 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 8 8 6 8 5 3 29 280 535 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 2 ] 2 126 a u - - MP 9 8 6 13 6 6 33 279 534 -9.230 -9.169 -0.019 -7.946 -8.226 -8.621 -1.385 -2.053 -1.521 1.802 -2.077 -2.992 1.443 -2.445 -2.219 1.277 -2.774 -0.476 1.717 -2.283 -0.176 -1.350 ML 10 8 6 13 6 2 26 277 531 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 11 8 6 13 6 2 26 276 531 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 12 8 6 13 6 0 22 271 526 -9.457 -8.155 -3.952 -4.634 -4.651 -0.234 IL 13 13 5 13 6 3 28 278 533 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 14 14 6 14 5 3 28 278 533 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 3 ] 3 125 g c - - MP 15 14 6 19 6 5 32 277 532 -5.173 -9.169 -0.058 -7.946 -8.226 -8.621 -3.341 -2.932 -3.352 0.733 -2.850 -4.089 2.038 -3.335 -3.409 2.221 -3.869 -0.781 1.672 -3.461 -0.485 -2.264 ML 16 14 6 19 6 2 26 275 529 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 17 14 6 19 6 2 25 274 529 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 18 14 6 19 6 0 21 270 525 -9.457 -8.155 -1.686 -4.634 -4.651 -0.727 IL 19 19 5 19 6 3 28 276 531 -2.934 -3.197 -0.557 -4.852 -5.628 -5.288 0.000 0.000 0.000 0.000 IR 20 20 6 20 5 3 27 276 531 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 4 ] 5 124 g c - - MP 21 20 6 25 6 5 32 275 530 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -3.083 -2.663 -3.136 1.454 -2.881 -3.916 1.582 -3.266 -3.219 2.141 -3.700 -0.551 1.713 -3.220 -0.567 -2.110 ML 22 20 6 25 6 2 25 273 527 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 23 20 6 25 6 2 25 272 527 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 24 20 6 25 6 0 20 266 521 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 25 25 5 25 6 2 27 274 529 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 26 26 6 26 5 2 27 274 529 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 5 ] 6 123 c g - - MP 27 26 6 31 6 5 31 274 528 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -2.449 -2.382 -2.592 0.929 -2.358 -3.403 2.102 -2.771 -2.635 1.741 -2.027 -0.154 1.258 -2.712 0.403 -1.686 ML 28 26 6 31 6 2 25 271 525 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 29 26 6 31 6 2 25 270 525 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 30 26 6 31 6 0 20 265 519 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 31 31 5 31 6 2 26 272 527 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 32 32 6 32 5 2 27 272 527 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 6 ] 7 122 u g - - MP 33 32 6 37 6 5 31 272 526 -9.255 -6.056 -0.039 -7.971 -8.251 -8.646 -2.964 -2.924 -3.031 0.476 -2.534 -3.779 1.527 -3.057 -3.074 1.110 -3.565 -1.098 1.031 -1.523 2.466 -2.087 ML 34 32 6 37 6 2 24 269 523 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 35 32 6 37 6 2 24 268 523 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 36 32 6 37 6 0 20 263 517 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 37 37 5 37 6 2 26 270 525 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 38 38 6 38 5 2 26 270 525 -2.530 -0.449 -6.041 -4.209 -5.315 0.000 0.000 0.000 0.000 [ MATP 7 ] 8 120 c g - - MP 39 38 6 43 6 5 30 270 524 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -2.772 -2.670 -2.890 0.793 -1.572 -3.694 2.342 -2.945 -2.903 1.323 -3.424 0.843 1.302 -3.025 -0.262 -1.900 ML 40 38 6 43 6 2 24 267 521 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 6 43 6 1 24 266 521 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 6 43 6 0 19 261 515 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 2 25 268 523 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 2 26 268 523 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 8 ] 9 119 c g - - MP 45 44 6 49 6 4 30 268 522 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -2.979 -2.725 -3.058 1.251 -2.671 -3.855 1.972 -3.123 -3.106 1.942 -3.610 -0.689 1.526 -3.167 0.084 -2.031 ML 46 44 6 49 6 1 24 265 520 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 23 265 519 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 19 259 514 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 2 25 267 521 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 2 25 266 521 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 9 ] 10 118 g c - - MP 51 50 6 55 6 4 29 266 520 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -2.867 -2.596 -2.951 1.626 -2.695 -3.745 1.618 -3.098 -3.022 1.922 -3.523 -0.595 1.091 -3.056 0.926 -1.977 ML 52 50 6 55 6 1 23 263 518 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 23 263 517 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 18 258 512 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 2 24 265 519 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 2 25 264 519 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 10 ] 11 117 g c - - MP 57 56 6 61 6 4 27 264 518 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -3.145 -2.868 -3.194 0.729 -2.730 -3.960 1.570 -3.213 -3.243 2.093 -3.728 -0.809 1.977 -3.316 0.495 -2.153 ML 58 56 6 61 6 1 23 261 516 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 22 261 515 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 18 256 511 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 2 24 263 517 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 2 24 263 517 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 11 ] 12 116 g c - - MP 63 62 6 67 6 4 26 262 516 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -3.224 -2.442 -3.231 1.418 -3.532 -3.939 0.711 -3.630 -1.676 2.890 -3.831 -0.243 0.733 -3.229 -1.181 -2.259 ML 64 62 6 67 6 1 22 259 514 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 6 1 21 259 513 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 6 67 6 0 18 255 510 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 23 261 515 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 23 261 515 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 12 ] 13 115 G C - - MP 69 68 6 73 6 4 24 260 514 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -4.075 -2.761 -4.119 0.769 -5.007 -4.891 -0.407 -4.437 -3.993 3.019 -4.428 1.980 -0.666 -4.232 -2.379 -2.959 ML 70 68 6 73 6 1 21 258 512 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 71 68 6 73 6 1 20 257 511 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 72 68 6 73 6 0 17 254 509 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 22 259 513 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 22 259 513 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 14 114 C G - - MP 75 74 6 79 4 2 22 258 512 -2.132 -2.752 -0.993 -3.049 -5.298 -5.266 -4.855 -1.447 -3.430 -5.167 3.729 -4.315 -4.940 -1.292 -5.109 -3.234 -0.004 -5.314 -1.165 -3.758 ML 76 74 6 79 4 1 20 256 511 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 4 1 18 255 509 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 78 74 6 79 4 0 17 253 508 -4.568 -4.250 -2.265 -0.520 IL 79 79 5 79 4 2 23 257 512 -1.165 -4.173 -1.033 -6.658 0.000 0.000 0.000 0.000 IR 80 80 6 80 3 1 23 258 513 -0.612 -1.614 -5.713 0.000 0.000 0.000 0.000 [ MATL 14 ] 17 - G - - - ML 81 80 6 83 3 2 22 255 510 -8.151 -0.018 -6.805 -1.184 -2.142 1.529 -1.163 D 82 80 6 83 3 0 16 252 507 -7.279 -2.792 -0.236 IL 83 83 3 83 3 1 21 255 510 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 15 ] 18 - u - - - ML 84 83 3 86 3 1 22 254 509 -8.151 -0.018 -6.805 0.579 -0.938 -1.151 0.617 D 85 83 3 86 3 0 16 252 506 -7.279 -0.945 -1.076 IL 86 86 3 86 3 1 20 254 509 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 16 ] 19 - g - - - ML 87 86 3 89 3 1 21 253 508 -8.258 -0.017 -6.912 -0.102 -0.123 0.507 -0.457 D 88 86 3 89 3 0 15 250 504 -6.601 -2.114 -0.399 IL 89 89 3 89 3 1 20 253 508 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 17 ] 20 - u - - - ML 90 89 3 92 3 1 21 252 507 -8.258 -0.017 -6.912 -0.183 0.279 -0.889 0.450 D 91 89 3 92 3 0 15 249 503 -6.601 -2.114 -0.399 IL 92 92 3 92 3 1 19 253 507 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 21 - u - - - ML 93 92 3 95 3 1 20 251 506 -8.258 -0.017 -6.912 0.338 -0.897 -0.635 0.637 D 94 92 3 95 3 0 14 248 503 -6.601 -2.114 -0.399 IL 95 95 3 95 3 1 19 252 506 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 22 - u - - - ML 96 95 3 98 3 1 19 250 505 -8.258 -0.017 -6.912 0.338 -0.897 -0.635 0.637 D 97 95 3 98 3 0 14 247 502 -6.601 -2.114 -0.399 IL 98 98 3 98 3 1 18 251 505 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 23 - a - - - ML 99 98 3 101 3 1 18 249 504 -8.258 -0.017 -6.912 0.664 0.047 -1.175 -0.090 D 100 98 3 101 3 0 13 247 501 -6.601 -1.038 -0.992 IL 101 101 3 101 3 1 17 250 504 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 24 - a - - - ML 102 101 3 104 3 1 18 248 503 -8.301 -0.016 -6.955 0.719 0.006 -1.201 -0.129 D 103 101 3 104 3 0 12 245 500 -6.174 -1.687 -0.566 IL 104 104 3 104 3 1 16 249 503 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 22 ] 25 - G - - - ML 105 104 3 107 3 1 17 247 502 -8.301 -0.016 -6.955 -0.437 -2.296 1.463 -1.732 D 106 104 3 107 3 0 12 244 499 -6.174 -1.687 -0.566 IL 107 107 3 107 3 1 16 248 502 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 23 ] 26 - g - - - ML 108 107 3 110 3 1 16 246 501 -8.301 -0.016 -6.955 -0.107 -0.124 0.328 -0.154 D 109 107 3 110 3 0 11 244 498 -6.174 -1.687 -0.566 IL 110 110 3 110 3 1 15 247 501 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 24 ] 27 - a - - - ML 111 110 3 113 3 1 15 245 500 -8.301 -0.016 -6.955 0.343 0.185 -0.630 -0.076 D 112 110 3 113 3 0 11 243 497 -6.174 -1.687 -0.566 IL 113 113 3 113 3 1 15 246 500 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 25 ] 28 - G - - - ML 114 113 3 116 3 1 15 244 499 -8.301 -0.016 -6.955 -0.371 -0.963 1.058 -0.661 D 115 113 3 116 3 0 10 242 496 -6.174 -1.687 -0.566 IL 116 116 3 116 3 1 14 245 499 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 26 ] 29 - U - - - ML 117 116 3 119 3 1 14 243 498 -8.301 -0.016 -6.955 -0.166 -0.986 -0.821 1.027 D 118 116 3 119 3 0 10 241 495 -6.174 -1.687 -0.566 IL 119 119 3 119 3 1 13 244 498 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 27 ] 30 - a - - - ML 120 119 3 122 3 1 13 242 497 -8.301 -0.098 -3.995 0.777 -0.694 -1.153 0.285 D 121 119 3 122 3 0 9 240 495 -6.174 -1.687 -0.566 IL 122 122 3 122 3 1 13 243 497 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 28 ] 31 - u - - - ML 123 122 3 125 3 1 14 241 496 -8.220 -0.017 -6.874 0.048 -0.633 0.017 0.389 D 124 122 3 125 3 0 9 239 494 -6.886 -0.788 -1.278 IL 125 125 3 125 3 1 12 242 496 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 29 ] 32 - a - - - ML 126 125 3 128 3 1 13 240 495 -8.301 -0.016 -6.955 0.458 0.327 -1.241 -0.075 D 127 125 3 128 3 0 8 238 492 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 11 241 495 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 30 ] 33 - a - - - ML 129 128 3 131 3 1 13 239 494 -8.301 -0.016 -6.955 0.275 -0.004 0.018 -0.358 D 130 128 3 131 3 0 7 237 491 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 11 240 494 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 34 - G - - - ML 132 131 3 134 3 1 12 238 493 -8.301 -0.016 -6.955 -0.476 -1.353 1.290 -1.168 D 133 131 3 134 3 0 7 236 490 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 11 239 493 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 35 - g - - - ML 135 134 3 137 3 1 12 237 492 -8.301 -0.016 -6.955 -0.564 0.303 0.493 -0.552 D 136 134 3 137 3 0 6 235 489 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 10 238 492 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 36 - G - - - ML 138 137 3 140 3 1 11 236 491 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 139 137 3 140 3 0 6 234 488 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 10 237 491 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 37 - G - - - ML 141 140 3 143 3 1 10 235 490 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 142 140 3 143 3 0 6 233 487 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 9 236 490 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 38 - A - - - ML 144 143 3 146 3 1 10 234 489 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 145 143 3 146 3 0 5 232 486 -6.174 -1.687 -0.566 IL 146 146 3 146 3 1 9 235 489 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 39 - G - - - ML 147 146 3 149 3 1 9 233 488 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 148 146 3 149 3 0 5 231 485 -6.174 -1.687 -0.566 IL 149 149 3 149 3 1 8 234 488 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 40 - G - - - ML 150 149 3 152 3 1 9 233 487 -8.301 -0.016 -6.955 -0.763 -0.633 1.177 -0.986 D 151 149 3 152 3 0 4 230 484 -6.174 -1.687 -0.566 IL 152 152 3 152 3 1 8 233 487 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 38 ] 41 - C - - - ML 153 152 3 155 3 1 8 232 486 -8.301 -0.016 -6.955 -2.565 1.788 -3.392 -1.819 D 154 152 3 155 3 0 4 229 484 -6.174 -1.687 -0.566 IL 155 155 3 155 3 1 7 232 486 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 39 ] 42 - G - - - ML 156 155 3 158 3 1 7 231 485 -8.301 -0.016 -6.955 0.358 -1.850 1.020 -1.276 D 157 155 3 158 3 0 3 228 483 -6.174 -1.687 -0.566 IL 158 158 3 158 3 1 6 231 486 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 40 ] 43 - u - - - ML 159 158 3 161 3 1 6 230 484 -8.301 -0.016 -6.955 -0.068 0.072 -0.822 0.515 D 160 158 3 161 3 0 3 228 482 -6.174 -1.687 -0.566 IL 161 161 3 161 3 1 6 230 485 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 41 ] 44 - A - - - ML 162 161 3 164 3 1 5 229 483 -8.672 -0.146 -3.413 1.832 -3.053 -2.619 -2.665 D 163 161 3 164 3 0 3 227 481 -5.620 -0.734 -1.403 IL 164 164 3 164 3 1 5 229 483 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 42 ] - 105 - A - - MR 165 164 3 167 3 1 5 228 482 -8.542 -0.016 -6.860 1.593 -2.085 -1.233 -1.632 D 166 164 3 167 3 0 2 226 480 -7.310 -1.226 -0.821 IR 167 167 3 167 3 1 5 228 482 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 43 ] - 104 - a - - MR 168 167 3 170 3 1 4 227 481 -8.612 -0.016 -6.930 0.479 -1.022 0.130 0.028 D 169 167 3 170 3 0 2 224 479 -6.896 -2.074 -0.407 IR 170 170 3 170 3 1 4 227 482 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 44 ] - 103 - u - - MR 171 170 3 173 3 1 4 226 480 -4.145 -0.097 -6.930 0.157 -0.787 0.065 0.333 D 172 170 3 173 3 0 1 224 479 -6.896 -0.906 -1.126 IR 173 173 3 173 3 1 4 226 481 -1.585 -0.673 -4.671 0.000 0.000 0.000 0.000 [ MATR 45 ] - 100 - g - - MR 174 173 3 176 3 1 3 225 479 -8.672 -0.015 -6.989 -0.169 -0.161 0.198 0.097 D 175 173 3 176 3 0 1 223 478 -6.390 -1.568 -0.620 IR 176 176 3 176 3 1 3 225 480 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 46 ] - 99 - G - - MR 177 176 3 179 2 1 2 224 478 -8.752 -0.003 -1.080 -2.742 1.658 -2.174 D 178 176 3 179 2 0 1 223 477 -4.432 -0.068 IR 179 179 3 179 2 1 2 224 479 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 47 ] - - - - - - B 180 179 3 181 207 0 1 223 477 [ BEGL 48 ] - - - - - - S 181 180 1 182 4 0 0 21 40 -0.039 -7.026 -6.434 -7.074 [ MATP 49 ] 45 52 G C - - MP 182 181 1 186 6 2 2 21 40 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -5.398 -3.413 -5.589 -0.255 -6.148 -4.939 -1.349 -5.856 -4.729 3.762 -5.025 -1.145 -1.719 -4.890 -3.427 -4.456 ML 183 181 1 186 6 1 1 21 40 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 184 181 1 186 6 1 1 21 40 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 185 181 1 186 6 0 0 19 38 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 186 186 5 186 6 1 1 21 40 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 187 187 6 187 5 1 1 21 40 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 50 ] 46 51 G C - - MP 188 187 6 192 4 2 2 19 38 -7.307 -7.514 -0.041 -5.929 -4.119 -2.933 -4.050 0.592 -4.160 -4.462 1.080 -4.309 -4.087 3.283 -4.422 -0.631 -0.038 -3.947 -1.621 -2.972 ML 189 187 6 192 4 1 1 21 39 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 190 187 6 192 4 1 1 20 39 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 191 187 6 192 4 0 0 19 38 -4.568 -4.250 -2.265 -0.520 IL 192 192 5 192 4 1 1 22 41 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 193 193 6 193 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 47 - G - - - ML 194 193 6 196 3 1 1 16 34 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 195 193 6 196 3 0 0 16 34 -6.174 -1.687 -0.566 IL 196 196 3 196 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 48 - A - - - ML 197 196 3 199 3 1 1 15 33 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 198 196 3 199 3 0 0 15 33 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 49 - A - - - ML 200 199 3 202 3 1 1 13 31 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 201 199 3 202 3 0 0 13 32 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 50 - A - - - ML 203 202 3 205 2 1 1 1 1 * 0.000 1.832 -3.053 -2.619 -2.665 D 204 202 3 205 2 0 0 0 0 * 0.000 IL 205 205 3 205 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 206 205 3 -1 0 0 0 0 0 [ BEGR 56 ] - - - - - - S 207 180 1 208 3 0 0 215 469 -8.301 -0.016 -6.955 IL 208 208 2 208 3 1 1 216 470 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 57 ] 53 - G - - - ML 209 208 2 211 3 1 1 215 469 -8.301 -0.016 -6.955 -2.279 -3.594 1.842 -2.978 D 210 208 2 211 3 0 0 202 457 -6.174 -1.687 -0.566 IL 211 211 3 211 3 1 1 214 469 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 58 ] 54 - A - - - ML 212 211 3 214 5 1 1 214 468 -2.369 -0.339 -7.207 -7.419 -8.310 1.832 -3.053 -2.619 -2.665 D 213 211 3 214 5 0 0 188 443 -4.959 -0.803 -4.221 -2.596 -2.508 IL 214 214 3 214 5 1 1 236 490 -0.104 -3.946 -8.472 -10.304 -9.578 0.000 0.000 0.000 0.000 [ MATP 59 ] 86 98 G C - - MP 215 214 3 219 6 2 2 26 45 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -5.398 -3.413 -5.589 -0.255 -6.148 -4.939 -1.349 -5.856 -4.729 3.762 -5.025 -1.145 -1.719 -4.890 -3.427 -4.456 ML 216 214 3 219 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 217 214 3 219 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 218 214 3 219 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 219 219 5 219 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 220 220 6 220 5 1 1 26 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 60 ] 87 97 U G - - MP 221 220 6 225 6 2 2 24 43 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -4.772 -4.719 -4.320 -0.995 -2.895 -4.640 1.402 -3.722 -4.369 -0.915 -4.593 -2.704 0.469 -4.790 3.348 -3.209 ML 222 220 6 225 6 1 1 23 42 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 223 220 6 225 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 224 220 6 225 6 0 0 21 40 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 225 225 5 225 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 226 226 6 226 5 1 1 24 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 61 ] 88 96 C G - - MP 227 226 6 231 6 2 2 22 41 -9.255 -9.195 -0.019 -7.971 -8.251 -8.646 -5.298 -5.266 -4.855 -1.447 -3.430 -5.167 3.729 -4.315 -4.940 -1.292 -5.109 -3.234 -0.004 -5.314 -1.165 -3.758 ML 228 226 6 231 6 1 1 22 41 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 229 226 6 231 6 1 1 22 41 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 230 226 6 231 6 0 0 20 39 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 231 231 5 231 6 1 1 22 41 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 232 232 6 232 5 1 1 22 41 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 62 ] 89 95 c g - - MP 233 232 6 237 4 2 2 20 39 -7.307 -7.514 -0.041 -5.929 -4.330 -4.370 -4.051 -0.634 -2.770 -4.470 2.687 -3.565 -4.090 -0.477 -4.392 -2.451 0.744 -4.395 2.491 -2.945 ML 234 232 6 237 4 1 1 21 40 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 235 232 6 237 4 1 1 21 40 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 236 232 6 237 4 0 0 20 39 -4.568 -4.250 -2.265 -0.520 IL 237 237 5 237 4 1 1 23 42 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 238 238 6 238 3 1 1 22 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 90 - u - - - ML 239 238 6 241 3 1 1 17 36 -8.301 -0.016 -6.955 -0.567 -1.094 0.183 0.783 D 240 238 6 241 3 0 0 17 35 -6.174 -1.687 -0.566 IL 241 241 3 241 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 64 ] 91 - a - - - ML 242 241 3 244 3 1 1 16 34 -8.301 -0.016 -6.955 0.872 0.145 -1.337 -0.582 D 243 241 3 244 3 0 0 16 34 -6.174 -1.687 -0.566 IL 244 244 3 244 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 65 ] 92 - A - - - ML 245 244 3 247 3 1 1 14 33 -8.301 -0.016 -6.955 1.832 -3.053 -2.619 -2.665 D 246 244 3 247 3 0 0 14 33 -6.174 -1.687 -0.566 IL 247 247 3 247 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 66 ] 93 - c - - - ML 248 247 3 250 3 1 1 13 31 -8.301 -0.415 -2.019 0.281 0.395 -1.251 0.070 D 249 247 3 250 3 0 0 13 32 -6.174 -1.687 -0.566 IL 250 250 3 250 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 67 ] 94 - A - - - ML 251 250 3 253 2 1 1 1 1 * 0.000 1.184 -1.165 -1.177 -0.251 D 252 250 3 253 2 0 0 0 0 * 0.000 IL 253 253 3 253 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 68 ] - - - - - - E 254 253 3 -1 0 0 0 0 0 // HMMER3/f [i1.1 | October 2013] NAME right_angle-3 DESC Right angle motif 3 LENG 82 MAXL 521 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri May 30 15:57:55 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/right_angle-3/CM /share/data/people/ppg15/motifs/right_angle-3/SEED NSEQ 16 EFFN 5.644531 CKSUM 1249646082 STATS LOCAL MSV -8.4597 0.71876 STATS LOCAL VITERBI -9.5248 0.71876 STATS LOCAL FORWARD -3.9088 0.71876 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.40092 1.50183 1.07984 1.65414 1.38629 1.38629 1.38629 1.38629 0.10865 4.40624 2.39963 1.46634 0.26236 0.00000 * 1 2.35821 1.14833 1.19880 1.24936 1 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02684 4.32444 4.32444 1.46634 0.26236 0.91215 0.51360 2 1.11893 1.70992 1.71668 1.16210 2 a - - ( 1.38629 1.38629 1.38629 1.38629 0.02587 4.36072 4.36072 1.46634 0.26236 1.89419 0.16304 3 2.33453 1.25753 1.04062 1.32594 3 g - - ( 1.38629 1.38629 1.38629 1.38629 0.09875 2.51003 4.36072 0.28918 1.38182 0.35793 1.20104 4 1.59193 1.69004 1.09342 1.28414 5 g - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 5 2.04115 1.14050 1.20205 1.38675 6 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 6 2.97734 2.05422 2.14909 0.35057 7 U - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 7 2.26003 0.90575 1.20150 1.65722 8 c - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 8 1.76321 1.30428 1.25003 1.30695 9 g - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 9 1.41373 1.68263 1.23026 1.27775 10 g - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 10 2.34986 1.80737 1.09832 0.89869 11 u - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 11 1.66155 2.53319 0.49718 2.09957 12 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 12 2.48685 3.58823 0.15637 3.38317 13 G - - ( 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 13 4.35705 0.07393 4.27294 3.11203 14 C - - ( 1.38629 1.38629 1.38629 1.38629 0.49909 1.33653 2.03898 0.72573 0.66159 1.09861 0.40547 14 2.76313 3.46795 0.19515 2.48879 17 G - - , 1.38629 1.38629 1.38629 1.38629 0.02806 4.28072 4.28072 1.46634 0.26236 2.53909 0.08223 15 0.91269 2.29869 2.44126 0.88888 18 u - - , 1.38629 1.38629 1.38629 1.38629 0.02806 4.28072 4.28072 1.46634 0.26236 0.48795 0.95161 16 1.60425 1.40520 0.86998 2.00483 19 g - - , 1.38629 1.38629 1.38629 1.38629 0.02562 4.37033 4.37033 1.46634 0.26236 1.77350 0.18601 17 1.61146 1.08937 2.09811 1.07503 20 u - - , 1.38629 1.38629 1.38629 1.38629 0.02562 4.37033 4.37033 1.46634 0.26236 1.77350 0.18601 18 1.12305 2.21832 1.87677 0.88470 21 u - - , 1.38629 1.38629 1.38629 1.38629 0.02562 4.37033 4.37033 1.46634 0.26236 1.77350 0.18601 19 1.12305 2.21832 1.87677 0.88470 22 u - - , 1.38629 1.38629 1.38629 1.38629 0.02562 4.37033 4.37033 1.46634 0.26236 1.77350 0.18601 20 0.85014 1.27304 2.46886 1.57029 23 a - - , 1.38629 1.38629 1.38629 1.38629 0.02562 4.37033 4.37033 1.46634 0.26236 0.41472 1.08035 21 0.80404 1.30846 2.50029 1.60851 24 a - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 22 1.83987 3.53263 0.26079 3.18218 25 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 23 1.58303 1.40884 1.03507 1.63465 26 g - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 24 1.13711 1.15971 1.87521 1.54949 27 a - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 25 1.87718 2.17216 0.48392 2.14828 28 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 26 1.58665 2.35394 2.03936 0.56162 29 U - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 27 0.75263 1.98794 2.42641 1.19224 30 a - - , 1.38629 1.38629 1.38629 1.38629 0.09415 4.40624 2.55555 1.46634 0.26236 1.09861 0.40547 28 1.39811 1.91114 1.30365 1.09815 31 u - - , 1.38629 1.38629 1.38629 1.38629 0.02646 4.33855 4.33855 1.46634 0.26236 0.27327 1.43082 29 1.02939 1.03907 2.53705 1.56115 32 a - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 30 1.20792 1.29958 1.29623 1.86449 33 a - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 31 1.95141 2.48680 0.35011 2.65722 34 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 32 2.18606 1.03619 0.86733 2.18244 35 g - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 33 3.74330 4.73248 0.04776 4.25746 36 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 34 3.74330 4.73248 0.04776 4.25746 37 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 35 0.04888 4.33929 3.97793 4.13911 38 A - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 36 3.74330 4.73248 0.04776 4.25746 39 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 37 2.40308 1.83546 0.38779 2.63852 40 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 38 4.10093 0.05977 4.58661 3.46488 41 C - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 39 1.12148 3.20555 0.55173 2.85230 42 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 40 1.48945 1.27234 2.02678 1.01454 43 u - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 41 0.04888 4.33929 3.97793 4.13911 44 A - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 42 3.34072 4.30759 0.06489 4.27202 45 G - - < 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 43 2.58134 2.03605 0.30361 2.88890 46 G - - < 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 44 3.74330 4.73248 0.04776 4.25746 47 G - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 45 0.04888 4.33929 3.97793 4.13911 48 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 46 0.04888 4.33929 3.97793 4.13911 49 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 47 0.04888 4.33929 3.97793 4.13911 50 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 48 3.13128 0.33591 1.95893 2.29623 51 C - - > 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 49 4.32977 0.08221 4.13637 3.00041 52 C - - > 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 50 3.74330 4.73248 0.04776 4.25746 53 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 51 0.04888 4.33929 3.97793 4.13911 54 A - - , 1.38629 1.38629 1.38629 1.38629 0.32152 1.33653 4.40624 3.40130 0.03390 1.09861 0.40547 52 3.29137 4.22838 0.06968 4.16496 86 G - - < 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 53 3.76494 2.18224 3.66621 0.17618 87 U - - < 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 54 4.35649 0.07395 4.27260 3.11192 88 C - - < 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 55 3.71221 0.84717 3.57382 0.65604 89 U - - < 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 56 2.12407 2.48941 1.15642 0.72798 90 u - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 57 0.66272 1.18191 2.72777 2.18486 91 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 58 0.04888 4.33929 3.97793 4.13911 92 A - - _ 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 59 1.18551 0.98509 2.53766 1.41902 93 c - - _ 1.38629 1.38629 1.38629 1.38629 0.37140 4.40624 1.21055 1.46634 0.26236 1.09861 0.40547 60 0.43296 2.47642 2.51527 1.67918 94 A - - _ 1.38629 1.38629 1.38629 1.38629 0.03477 4.06961 4.06961 1.46634 0.26236 0.07870 2.58124 61 2.65578 3.72438 0.13392 3.47472 95 G - - > 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 62 3.39396 4.44434 0.06257 4.17786 96 G - - > 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 63 2.79239 3.86957 0.11822 3.52824 97 G - - > 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 64 4.36195 0.08114 4.15364 3.00630 98 C - - > 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 65 2.43450 3.91202 0.14685 3.54270 99 G - - , 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 66 1.63307 1.44848 1.14607 1.37887 100 g - - , 1.38629 1.38629 1.38629 1.38629 0.15205 2.55555 2.75822 0.80412 0.59327 1.09861 0.40547 67 1.30070 2.06710 1.26972 1.13882 103 u - - , 1.38629 1.38629 1.38629 1.38629 0.02606 4.35368 4.35368 1.46634 0.26236 1.97362 0.14961 68 1.02357 2.30663 1.22439 1.39773 104 a - - , 1.38629 1.38629 1.38629 1.38629 0.09023 4.35368 2.61156 1.46634 0.26236 1.97362 0.14961 69 0.17622 3.39704 2.45152 3.17162 105 A - - , 1.38629 1.38629 1.38629 1.38629 0.23394 1.63525 4.29121 1.60016 0.22548 0.18390 1.78391 70 3.38346 4.42577 0.06351 4.15796 114 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 71 3.58769 0.63942 3.38883 0.88918 115 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 72 2.09008 0.59686 2.34401 1.47035 116 C - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 73 1.18739 1.16448 1.33867 2.11440 117 c - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 74 2.06364 1.32750 1.09749 1.29404 118 g - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 75 1.59046 1.34082 1.09684 1.60640 119 g - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 76 1.77918 1.89207 0.86248 1.35344 120 g - - ) 1.38629 1.38629 1.38629 1.38629 0.06023 3.07364 4.40624 0.46362 0.99157 1.09861 0.40547 77 2.47057 2.00777 0.33302 2.74239 122 G - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 78 1.83255 1.43897 0.86852 1.69690 123 g - - ) 1.38629 1.38629 1.38629 1.38629 0.02470 4.40624 4.40624 1.46634 0.26236 1.09861 0.40547 79 1.40979 1.18153 1.54630 1.44409 124 c - - ) 1.38629 1.38629 1.38629 1.38629 0.07139 4.40624 2.86999 1.46634 0.26236 1.09861 0.40547 80 1.46396 1.10600 1.15767 2.09083 125 c - - ) 1.38629 1.38629 1.38629 1.38629 0.02587 4.36072 4.36072 1.46634 0.26236 1.89419 0.16304 81 1.26227 1.88035 1.45412 1.10610 126 u - - ) 1.38629 1.38629 1.38629 1.38629 0.06313 4.36072 3.02812 1.46634 0.26236 1.89419 0.16304 82 1.38846 1.27225 1.05119 2.11347 127 g - - ) 1.38629 1.38629 1.38629 1.38629 0.01351 4.31111 * 1.46634 0.26236 0.00000 * //