INFERNAL1/a [1.1 | October 2013] NAME TRIT DESC Tuberculosis rho independent terminator STATES 253 NODES 56 CLEN 83 W 104 ALPH RNA RF no CONS yes MAP yes DATE Fri May 30 16:34:35 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/TRIT/CM /share/data/people/ppg15/motifs/TRIT/SEED COM [2] /share/data/bin/cmcalibrate --mpi --seed 1 /share/data/people/ppg15/motifs/TRIT/CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 84 EFFN 3.458130 CKSUM 593281175 NULL 0.000 0.000 0.000 0.000 GA 25.00 EFP7GF -12.6604 0.71914 ECMLC 0.64343 -5.20623 2.49316 1600000 170087 0.007055 ECMGC 0.49904 -11.89499 -1.45777 1600000 73131 0.005470 ECMLI 0.63821 -3.49495 3.25160 1600000 88949 0.013491 ECMGI 0.57551 -7.02746 1.64225 1600000 58747 0.006809 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 1 1 104 133 -7.468 -7.675 -0.088 -4.356 IL 1 1 2 1 4 1 12 107 136 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 1 11 106 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - a - - - ML 3 2 3 5 3 1 11 104 133 -8.405 -0.015 -7.059 0.167 -0.022 -0.050 -0.110 D 4 2 3 5 3 0 6 103 132 -6.680 -0.959 -1.072 IL 5 5 3 5 3 1 10 105 134 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - g - - - ML 6 5 3 8 3 1 10 103 132 -8.453 -0.015 -7.107 0.074 -0.412 0.248 0.012 D 7 5 3 8 3 0 4 101 130 -6.174 -1.687 -0.566 IL 8 8 3 8 3 1 9 104 133 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - c - - - ML 9 8 3 11 3 1 9 102 131 -8.453 -0.015 -7.107 -0.072 0.159 -0.013 -0.087 D 10 8 3 11 3 0 4 100 129 -6.174 -1.687 -0.566 IL 11 11 3 11 3 1 8 103 132 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 4 ] 4 - u - - - ML 12 11 3 14 3 1 8 101 130 -8.453 -0.015 -7.107 -0.213 0.087 -0.242 0.299 D 13 11 3 14 3 0 3 99 128 -6.174 -1.687 -0.566 IL 14 14 3 14 3 1 8 102 131 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 5 ] 5 - u - - - ML 15 14 3 17 3 1 7 100 129 -8.453 -0.015 -7.107 -0.186 -0.240 -0.296 0.546 D 16 14 3 17 3 0 3 98 127 -6.174 -1.687 -0.566 IL 17 17 3 17 3 1 7 101 130 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 6 ] 6 - a - - - ML 18 17 3 20 3 1 6 99 128 -8.453 -0.101 -3.946 0.349 -0.004 -0.497 0.030 D 19 17 3 20 3 0 2 97 127 -6.174 -1.687 -0.566 IL 20 20 3 20 3 1 6 100 129 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 7 ] 7 - a - - - ML 21 20 3 23 3 1 7 98 127 -8.367 -0.016 -7.021 0.265 -0.344 0.083 -0.073 D 22 20 3 23 3 0 1 97 126 -6.980 -0.854 -1.189 IL 23 23 3 23 3 1 5 99 128 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 8 ] 8 - a - - - ML 24 23 3 26 3 1 6 97 126 -8.443 -0.026 -6.053 0.097 -0.092 0.050 -0.063 D 25 23 3 26 3 0 0 95 124 -6.300 -1.813 -0.509 IL 26 26 3 26 3 1 5 98 127 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 9 ] 9 - u - - - ML 27 26 3 29 3 1 5 96 125 -8.432 -0.015 -7.086 -0.332 -0.158 -0.219 0.536 D 28 26 3 29 3 0 0 94 124 -6.427 -1.537 -0.635 IL 29 29 3 29 3 1 4 97 126 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 10 ] 10 - u - - - ML 30 29 3 32 3 1 5 95 124 -8.443 -0.015 -7.097 -0.203 0.234 -0.430 0.278 D 31 29 3 32 3 0 0 93 123 -6.300 -1.441 -0.692 IL 32 32 3 32 3 1 3 96 125 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 11 ] 11 - g - - - ML 33 32 3 35 3 1 4 94 123 -8.816 -0.014 -7.134 -0.452 -0.107 0.322 0.124 D 34 32 3 35 3 0 0 93 122 -5.620 -0.734 -1.403 IL 35 35 3 35 3 1 2 95 124 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 97 - u - - MR 36 35 3 38 3 1 3 93 122 -8.816 -0.014 -7.134 -0.177 -0.334 0.140 0.287 D 37 35 3 38 3 0 0 91 120 -6.390 -1.568 -0.620 IR 38 38 3 38 3 1 1 94 123 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 13 ] - 96 - u - - MR 39 38 3 41 3 1 3 92 121 -8.816 -0.014 -7.134 -0.020 -0.006 -0.030 0.054 D 40 38 3 41 3 0 0 90 119 -6.390 -1.568 -0.620 IR 41 41 3 41 3 1 1 93 122 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 14 ] - 95 - a - - MR 42 41 3 44 3 1 2 91 120 -8.816 -0.014 -7.134 0.127 -0.405 0.124 0.087 D 43 41 3 44 3 0 0 89 118 -6.390 -1.568 -0.620 IR 44 44 3 44 3 1 1 92 121 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 15 ] - 94 - a - - MR 45 44 3 47 3 1 2 90 119 -8.816 -0.014 -7.134 0.343 -0.118 -0.414 0.083 D 46 44 3 47 3 0 0 88 117 -6.390 -1.568 -0.620 IR 47 47 3 47 3 1 1 91 120 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 16 ] - 93 - u - - MR 48 47 3 50 3 1 2 89 118 -8.816 -0.014 -7.134 0.027 -0.346 -0.058 0.303 D 49 47 3 50 3 0 0 87 116 -6.390 -1.568 -0.620 IR 50 50 3 50 3 1 1 90 119 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 17 ] - 92 - a - - MR 51 50 3 53 3 1 1 88 117 -8.816 -0.014 -7.134 0.292 -0.164 0.023 -0.206 D 52 50 3 53 3 0 0 86 115 -6.390 -1.568 -0.620 IR 53 53 3 53 3 1 1 89 118 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 18 ] - 91 - g - - MR 54 53 3 56 3 1 1 87 116 -8.816 -0.014 -7.134 0.023 -0.404 0.375 -0.103 D 55 53 3 56 3 0 0 85 114 -6.390 -1.568 -0.620 IR 56 56 3 56 3 1 1 88 117 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 19 ] - 90 - g - - MR 57 56 3 59 3 1 1 86 115 -8.816 -0.014 -7.134 -0.044 -0.447 0.356 0.024 D 58 56 3 59 3 0 0 84 114 -6.390 -1.568 -0.620 IR 59 59 3 59 3 1 1 87 116 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 20 ] - 89 - g - - MR 60 59 3 62 5 1 1 85 114 -7.528 -0.029 -7.344 -7.556 -8.448 -0.088 0.089 0.358 -0.487 D 61 59 3 62 5 0 0 84 113 -5.352 -0.707 -2.978 -4.409 -2.404 IR 62 62 3 62 5 1 1 85 115 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 21 ] 12 88 c g - - MP 63 62 3 67 6 2 2 84 113 -9.329 -9.268 -0.069 -6.806 -4.956 -8.719 -2.013 -1.919 -2.215 0.978 -2.160 -0.313 1.803 -2.497 -2.230 1.740 -0.461 -0.352 1.094 -2.312 -0.270 -1.402 ML 64 62 3 67 6 1 1 82 112 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 65 62 3 67 6 1 1 82 112 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 66 62 3 67 6 0 0 79 109 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 67 67 5 67 6 1 1 84 113 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 68 68 6 68 5 1 1 83 113 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 22 ] 13 87 g c - - MP 69 68 6 73 6 2 2 82 111 -6.667 -6.932 -0.040 -7.994 -8.274 -8.669 -2.991 -1.808 -2.476 1.178 -3.423 -2.250 0.788 -3.492 -3.242 2.947 -3.126 -0.048 0.401 -2.989 -1.156 -2.092 ML 70 68 6 73 6 1 1 81 110 -6.361 -6.707 -1.161 -1.116 -6.557 -4.086 0.327 -0.563 0.181 -0.096 MR 71 68 6 73 6 1 1 81 110 -7.465 -6.194 -0.959 -6.172 -1.306 -4.385 0.082 0.018 -0.205 0.086 D 72 68 6 73 6 0 0 77 107 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 73 73 5 73 6 1 1 82 111 -2.705 -2.968 -0.679 -4.623 -5.399 -5.060 0.000 0.000 0.000 0.000 IR 74 74 6 74 5 1 1 81 111 -2.470 -0.472 -5.981 -4.149 -5.255 0.000 0.000 0.000 0.000 [ MATP 23 ] 15 85 C G - - MP 75 74 6 79 6 2 2 80 109 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -4.447 -4.419 -3.985 -0.652 -2.230 -4.926 3.540 -4.041 -4.364 -0.485 -4.279 -2.400 0.406 -4.617 -0.326 -3.241 ML 76 74 6 79 6 1 1 78 108 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 77 74 6 79 6 1 1 78 107 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 78 74 6 79 6 0 0 75 105 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 79 79 5 79 6 1 1 80 109 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 80 80 6 80 5 1 1 79 109 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 24 ] 16 84 G C - - MP 81 80 6 85 6 2 2 78 107 -9.329 -9.268 -0.028 -8.044 -6.636 -8.719 -4.203 -2.926 -4.204 0.511 -4.761 -3.261 -0.311 -4.713 -4.177 3.493 -1.409 -0.713 -0.589 -3.928 -2.243 -3.229 ML 82 80 6 85 6 1 1 76 106 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 83 80 6 85 6 1 1 76 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 84 80 6 85 6 0 0 73 103 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 85 85 5 85 6 1 1 78 107 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 86 86 6 86 5 1 1 77 107 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 17 83 A U - - MP 87 86 6 91 6 2 2 76 105 -9.319 -9.258 -0.030 -7.286 -6.898 -8.709 -4.589 -3.409 -4.546 3.684 -5.714 -6.703 -1.338 -4.583 -4.428 0.236 -5.037 -0.524 -1.590 -5.557 -3.253 -3.351 ML 88 86 6 91 6 1 1 74 104 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 89 86 6 91 6 1 1 74 103 -7.116 -5.845 -1.564 -5.824 -0.840 -4.037 0.183 -0.365 -0.399 0.411 D 90 86 6 91 6 0 0 71 101 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 91 91 5 91 6 1 1 76 105 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 92 92 6 92 5 1 1 75 105 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 18 82 G C - - MP 93 92 6 97 6 2 2 74 103 -9.312 -9.251 -0.018 -8.028 -8.308 -8.703 -4.430 -3.001 -4.442 0.384 -5.141 -4.609 -0.540 -4.918 -4.308 3.531 -1.508 -0.260 -0.816 -4.166 -2.517 -3.405 ML 94 92 6 97 6 1 1 73 102 -6.306 -6.653 -1.231 -1.061 -6.502 -4.032 0.378 -0.516 0.063 -0.063 MR 95 92 6 97 6 1 1 72 102 -7.148 -5.877 -1.469 -5.856 -0.895 -4.069 0.155 0.107 -0.519 0.153 D 96 92 6 97 6 0 0 69 99 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 97 97 5 97 6 1 1 74 103 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 98 98 6 98 5 1 1 73 103 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 19 81 C G - - MP 99 98 6 103 6 2 2 72 101 -9.325 -9.264 -0.018 -8.040 -8.320 -8.715 -4.843 -4.805 -3.545 -1.067 -3.666 -5.261 3.689 -3.265 -4.769 -0.878 -5.077 -2.798 -0.036 -5.014 -1.245 -3.653 ML 100 98 6 103 6 1 1 70 100 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 101 98 6 103 6 1 1 70 99 -7.042 -5.771 -1.680 -5.749 -0.788 -3.963 0.372 -0.522 0.077 -0.068 D 102 98 6 103 6 0 0 67 97 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 103 103 5 103 6 1 1 72 101 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 104 104 6 104 5 1 1 71 101 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 20 80 A U - - MP 105 104 6 109 6 2 2 70 99 -9.325 -9.264 -0.018 -8.040 -8.320 -8.715 -4.716 -3.550 -4.622 3.708 -5.487 -6.675 -1.124 -4.600 -4.530 0.070 -5.120 -0.906 -1.532 -5.672 -3.059 -3.439 ML 106 104 6 109 6 1 1 68 98 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 107 104 6 109 6 1 1 68 97 -7.042 -5.771 -1.680 -5.749 -0.788 -3.963 0.282 -0.367 -0.289 0.251 D 108 104 6 109 6 0 0 65 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 109 109 5 109 6 1 1 70 99 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 110 110 6 110 5 1 1 69 99 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 21 79 G C - - MP 111 110 6 115 6 2 2 68 97 -9.325 -9.264 -0.018 -8.040 -8.320 -8.715 -5.668 -3.548 -5.920 -0.453 -6.518 -5.037 -1.653 -6.182 -4.881 3.799 -5.163 -1.298 -2.018 -5.060 -3.751 -4.784 ML 112 110 6 115 6 1 1 66 96 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 113 110 6 115 6 1 1 66 95 -7.042 -5.771 -1.680 -5.749 -0.788 -3.963 0.285 -0.159 -0.346 0.136 D 114 110 6 115 6 0 0 63 93 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 115 115 5 115 6 1 1 68 97 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 116 116 6 116 5 1 1 67 97 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 22 78 A U - - MP 117 116 6 121 6 2 2 66 95 -9.325 -9.264 -0.018 -8.040 -8.320 -8.715 -2.786 -3.346 -3.737 3.455 -3.952 -4.806 -0.028 -3.935 -3.921 0.614 -4.445 -1.201 -0.123 -4.067 -1.827 -2.127 ML 118 116 6 121 6 1 1 64 94 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 119 116 6 121 6 1 1 64 94 -7.042 -5.771 -1.518 -5.749 -0.883 -3.963 0.282 -0.367 -0.289 0.251 D 120 116 6 121 6 0 0 61 91 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 121 121 5 121 6 1 1 66 95 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 122 122 6 122 5 1 1 65 95 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 31 ] 23 77 C G - - MP 123 122 6 127 6 2 2 64 93 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -5.640 -5.637 -5.133 -1.808 -3.656 -5.400 3.784 -4.577 -5.242 -1.681 -5.362 -3.624 -0.280 -5.632 -1.412 -4.053 ML 124 122 6 127 6 1 1 62 92 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 125 122 6 127 6 1 1 62 91 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 126 122 6 127 6 0 0 59 89 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 127 127 5 127 6 1 1 64 93 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 128 128 6 128 5 1 1 63 93 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 32 ] 24 76 G C - - MP 129 128 6 133 6 2 2 62 91 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -4.818 -3.158 -4.863 0.473 -5.800 -4.887 -0.972 -5.296 -4.527 3.607 -4.854 -0.123 -1.245 -4.535 -3.007 -3.751 ML 130 128 6 133 6 1 1 61 90 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 131 128 6 133 6 1 1 60 90 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 132 128 6 133 6 0 0 57 87 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 133 133 5 133 6 1 1 62 91 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 134 134 6 134 5 1 1 61 91 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 33 ] 25 75 C G - - MP 135 134 6 139 6 2 2 60 89 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -4.798 -4.809 -4.447 -0.950 -3.061 -4.821 3.531 -3.891 -4.486 -0.780 -4.748 -2.797 0.750 -4.823 -0.067 -3.300 ML 136 134 6 139 6 1 1 59 88 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 137 134 6 139 6 1 1 58 88 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 138 134 6 139 6 0 0 55 85 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 139 139 5 139 6 1 1 60 89 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 140 140 6 140 5 1 1 59 89 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 34 ] 26 74 A U - - MP 141 140 6 145 6 2 2 58 87 -9.329 -9.268 -0.027 -8.044 -6.768 -8.719 -2.385 -3.331 -3.700 3.487 -4.004 -4.798 -0.239 -3.153 -3.887 0.572 -4.423 -0.785 -0.467 -4.044 -1.956 -2.846 ML 142 140 6 145 6 1 1 57 86 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 143 140 6 145 6 1 1 56 86 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 144 140 6 145 6 0 0 53 83 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 145 145 5 145 6 1 1 58 87 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 146 146 6 146 5 1 1 57 87 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 35 ] 27 73 g c - - MP 147 146 6 151 6 2 2 56 85 -9.320 -9.259 -0.018 -8.036 -8.315 -8.710 -3.129 -1.945 -3.150 2.159 -3.443 -3.912 0.722 -3.546 -3.335 2.483 -3.772 -0.242 0.736 -3.179 -1.140 -1.670 ML 148 146 6 151 6 1 1 55 84 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 149 146 6 151 6 1 1 55 84 -7.101 -3.427 -1.738 -5.808 -0.942 -4.021 0.202 -0.364 -0.377 0.381 D 150 146 6 151 6 0 0 51 81 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 151 151 5 151 6 1 1 56 85 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 152 152 6 152 5 1 1 55 85 -2.468 -0.473 -5.979 -4.147 -5.253 0.000 0.000 0.000 0.000 [ MATP 36 ] 28 71 A U - - MP 153 152 6 157 6 2 2 54 83 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -4.733 -3.563 -4.635 3.712 -5.511 -6.702 -1.147 -4.612 -4.545 0.052 -5.135 -0.918 -1.555 -5.695 -3.082 -3.453 ML 154 152 6 157 6 1 1 53 82 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 155 152 6 157 6 1 1 52 82 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 156 152 6 157 6 0 0 49 79 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 157 157 5 157 6 1 1 54 83 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 158 158 6 158 5 1 1 53 83 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 37 ] 29 70 A U - - MP 159 158 6 163 6 2 2 52 81 -6.990 -7.041 -0.036 -8.044 -8.324 -8.719 -4.589 -3.071 -3.246 3.680 -5.179 -5.883 -1.105 -4.540 -4.636 0.270 -5.180 -1.191 -1.336 -5.032 -2.932 -3.461 ML 160 158 6 163 6 1 1 51 80 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 161 158 6 163 6 1 1 50 79 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 162 158 6 163 6 0 0 47 77 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 163 163 5 163 6 1 1 52 81 -2.680 -2.943 -0.694 -4.598 -5.374 -5.035 0.000 0.000 0.000 0.000 IR 164 164 6 164 5 1 1 51 81 -2.467 -0.473 -5.978 -4.146 -5.252 0.000 0.000 0.000 0.000 [ MATP 38 ] 31 68 g c - - MP 165 164 6 169 6 2 2 50 79 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -2.742 -2.458 -2.837 0.948 -2.747 -3.623 1.255 -3.089 -2.939 2.318 -2.775 -0.504 1.909 -2.238 -0.592 -1.920 ML 166 164 6 169 6 1 1 49 78 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 167 164 6 169 6 1 1 48 78 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 168 164 6 169 6 0 0 45 75 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 169 169 5 169 6 1 1 50 79 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 170 170 6 170 5 1 1 49 79 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 39 ] 32 67 C G - - MP 171 170 6 175 6 2 2 48 77 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -4.231 -4.062 -4.086 0.407 -2.964 -4.677 3.329 -3.676 -4.068 0.150 -4.454 -1.889 0.913 -4.376 -0.599 -2.899 ML 172 170 6 175 6 1 1 47 76 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 173 170 6 175 6 1 1 46 76 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 174 170 6 175 6 0 0 43 73 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 175 175 5 175 6 1 1 48 77 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 176 176 6 176 5 1 1 47 77 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 40 ] 33 66 g c - - MP 177 176 6 181 6 2 2 46 75 -9.329 -9.268 -0.018 -8.044 -8.324 -8.719 -2.158 -2.298 -2.046 1.210 -2.697 -3.463 1.698 -2.996 -2.795 2.393 -2.979 -0.239 0.925 -2.748 -0.522 -1.800 ML 178 176 6 181 6 1 1 45 74 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 179 176 6 181 6 1 1 44 74 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 180 176 6 181 6 0 0 41 71 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 181 181 5 181 6 1 1 46 75 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 182 182 6 182 5 1 1 45 75 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 41 ] 34 65 C G - - MP 183 182 6 187 6 2 2 44 73 -9.329 -9.268 -0.024 -8.044 -7.095 -8.719 -5.532 -5.528 -5.310 -1.861 -4.211 -3.995 3.823 -3.950 -5.454 -1.680 -5.620 -3.596 -0.776 -5.694 -2.122 -4.353 ML 184 182 6 187 6 1 1 43 72 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 185 182 6 187 6 1 1 42 72 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 186 182 6 187 6 0 0 39 69 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 187 187 5 187 6 1 1 44 73 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 188 188 6 188 5 1 1 43 73 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 35 64 c g - - MP 189 188 6 193 6 2 2 42 71 -9.323 -4.561 -0.085 -6.947 -8.318 -8.713 -3.809 -3.569 -3.768 1.677 -2.905 -4.481 2.936 -3.512 -3.746 0.449 -4.192 -1.400 0.907 -4.019 -0.558 -2.624 ML 190 188 6 193 6 1 1 41 70 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 191 188 6 193 6 1 1 40 70 -7.067 -5.796 -1.473 -5.774 -0.908 -3.988 0.247 -0.364 -0.328 0.310 D 192 188 6 193 6 0 0 38 67 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 193 193 5 193 6 1 1 42 71 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 194 194 6 194 5 1 1 41 71 -2.766 -0.372 -6.278 -4.445 -5.551 0.000 0.000 0.000 0.000 [ MATP 43 ] 36 62 c g - - MP 195 194 6 199 6 2 2 40 69 -9.322 -9.262 -0.069 -7.033 -4.892 -8.713 -3.501 -3.482 -3.515 0.218 -1.992 -4.232 2.984 -1.920 -3.501 0.366 -3.976 -1.498 1.597 -3.721 0.008 -2.417 ML 196 194 6 199 6 1 1 39 68 -6.343 -6.689 -1.183 -1.098 -6.539 -4.068 0.583 -0.533 -0.235 -0.057 MR 197 194 6 199 6 1 1 39 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 198 194 6 199 6 0 0 36 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 199 199 5 199 6 1 1 40 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 200 200 6 200 5 1 1 39 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 37 61 g c - - MP 201 200 6 205 6 2 2 38 67 -6.115 -6.830 -0.227 -3.362 -6.678 -6.039 -1.921 -1.733 -2.090 1.532 -2.145 -2.561 1.227 -1.800 -1.923 2.111 -2.343 -0.237 1.077 -2.008 -0.311 -1.023 ML 202 200 6 205 6 1 1 37 66 -6.333 -6.679 -1.196 -1.088 -6.529 -4.058 0.256 -0.364 -0.317 0.294 MR 203 200 6 205 6 1 1 37 66 -3.311 -6.212 -1.233 -6.190 -1.324 -4.404 0.127 -0.355 -0.658 0.577 D 204 200 6 205 6 0 0 34 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 205 205 5 205 6 1 1 38 67 -2.908 -3.171 -0.652 -3.783 -5.602 -5.262 0.000 0.000 0.000 0.000 IR 206 206 6 206 5 1 1 37 67 -2.476 -0.470 -5.987 -4.155 -5.260 0.000 0.000 0.000 0.000 [ MATP 45 ] 39 59 g c - - MP 207 206 6 211 6 2 2 36 65 -9.156 -9.095 -0.020 -7.872 -8.151 -8.546 -2.498 -2.001 -2.617 1.716 -2.492 -3.420 1.681 -2.850 -2.694 1.760 -3.208 -0.082 1.389 -2.716 -0.371 -1.435 ML 208 206 6 211 6 1 1 35 64 -7.549 -7.895 -0.524 -1.920 -7.745 -5.274 0.816 -0.488 -0.632 -0.182 MR 209 206 6 211 6 1 1 35 64 -7.105 -5.834 -1.407 -5.812 -0.946 -4.026 0.197 -0.364 -0.384 0.390 D 210 206 6 211 6 0 0 33 62 -9.363 -8.061 -1.919 -4.540 -4.558 -0.633 IL 211 211 5 211 6 1 1 36 65 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 212 212 6 212 5 1 1 36 65 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 46 ] 40 58 u a - - MP 213 212 6 217 6 2 2 34 63 -9.314 -9.254 -0.037 -6.752 -7.159 -7.468 -1.761 -2.241 -2.089 1.591 -2.213 -3.194 1.685 -2.606 -2.418 1.412 -2.969 -0.521 1.781 -2.487 -0.191 -1.404 ML 214 212 6 217 6 1 1 33 62 -6.454 -6.800 -1.053 -1.209 -6.650 -4.180 0.726 -0.631 -0.342 -0.133 MR 215 212 6 217 6 1 1 33 62 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 216 212 6 217 6 0 0 30 59 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 217 217 5 217 6 1 1 34 63 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 218 218 6 218 5 1 1 34 63 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 47 ] 41 57 u a - - MP 219 218 6 223 6 2 2 32 61 -9.311 -6.943 -0.040 -8.026 -6.443 -8.701 -2.374 -2.374 -2.522 1.529 -2.312 -3.353 1.740 -2.370 -2.198 1.541 -3.118 -0.565 1.768 -2.649 -0.166 -1.535 ML 220 218 6 223 6 1 1 31 60 -6.366 -6.712 -1.154 -1.121 -6.562 -4.091 0.315 -0.481 0.006 0.050 MR 221 218 6 223 6 1 1 31 60 -7.060 -5.789 -1.486 -5.767 -0.901 -3.981 0.568 -0.522 -0.226 -0.049 D 222 218 6 223 6 0 0 29 58 -9.138 -7.836 -2.833 -4.315 -4.333 -0.408 IL 223 223 5 223 6 1 1 32 61 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 224 224 6 224 5 1 1 32 61 -2.471 -0.471 -5.982 -4.150 -5.256 0.000 0.000 0.000 0.000 [ MATP 48 ] 42 55 c g - - MP 225 224 6 229 6 2 2 30 59 -9.317 -9.256 -0.018 -8.032 -8.312 -8.707 -1.961 -2.073 -1.806 1.315 -2.047 -2.722 1.832 -2.427 -2.200 1.357 -2.759 -0.199 1.622 -1.992 0.047 -1.218 ML 226 224 6 229 6 1 1 29 59 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 227 224 6 229 6 1 1 29 58 -7.139 -5.868 -1.353 -5.846 -0.980 -4.060 0.690 -0.606 -0.312 -0.114 D 228 224 6 229 6 0 0 27 57 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 229 229 5 229 6 1 1 30 59 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 230 230 6 230 5 1 1 30 59 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 49 ] 43 54 c g - - MP 231 230 6 235 4 2 2 28 57 -7.468 -4.143 -0.164 -4.466 -3.307 -2.912 -3.348 0.964 -2.890 -4.128 2.277 -3.351 -3.394 2.098 -3.877 -0.667 1.294 -3.445 -0.409 -2.248 ML 232 230 6 235 4 1 1 28 58 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 233 230 6 235 4 1 1 28 57 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 234 230 6 235 4 0 0 27 56 -4.568 -4.250 -2.265 -0.520 IL 235 235 5 235 4 1 1 31 60 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 236 236 6 236 3 1 1 31 60 -0.911 -1.202 -4.900 0.000 0.000 0.000 0.000 [ MATL 50 ] 44 - g - - - ML 237 236 6 239 3 1 1 17 36 -8.410 -0.015 -7.065 -0.012 -0.033 0.179 -0.155 D 238 236 6 239 3 0 0 16 35 -6.635 -1.003 -1.026 IL 239 239 3 239 3 1 1 21 39 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 51 ] 45 - g - - - ML 240 239 3 242 3 1 1 16 34 -8.453 -0.015 -7.107 -0.138 -0.391 0.593 -0.285 D 241 239 3 242 3 0 0 16 34 -6.174 -1.687 -0.566 IL 242 242 3 242 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 52 ] 46 - g - - - ML 243 242 3 245 3 1 1 14 33 -8.453 -0.138 -3.499 -0.219 0.061 0.280 -0.180 D 244 242 3 245 3 0 0 14 33 -6.174 -1.687 -0.566 IL 245 245 3 245 3 1 1 18 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 47 - u - - - ML 246 245 3 248 3 1 1 13 31 -8.331 -0.376 -2.144 0.007 0.184 -0.552 0.235 D 247 245 3 248 3 0 0 13 31 -7.212 -2.387 -0.318 IL 248 248 3 248 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 48 - c - - - ML 249 248 3 251 2 1 1 1 1 * 0.000 -0.239 0.210 0.111 -0.126 D 250 248 3 251 2 0 0 0 0 * 0.000 IL 251 251 3 251 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 55 ] - - - - - - E 252 251 3 -1 0 0 0 0 0 // HMMER3/f [i1.1 | October 2013] NAME TRIT DESC Tuberculosis rho independent terminator LENG 83 MAXL 157 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri May 30 16:34:35 2014 COM [1] /share/data/bin/cmbuild -F /share/data/people/ppg15/motifs/TRIT/CM /share/data/people/ppg15/motifs/TRIT/SEED NSEQ 84 EFFN 8.718384 CKSUM 593281175 STATS LOCAL MSV -8.5486 0.71914 STATS LOCAL VITERBI -9.2966 0.71914 STATS LOCAL FORWARD -4.0944 0.71914 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.58513 1.29201 1.21001 1.50432 1.38629 1.38629 1.38629 1.38629 0.05932 4.75802 3.01574 1.46634 0.26236 0.00000 * 1 1.31491 1.28911 1.34195 1.63655 1 c - - : 1.38629 1.38629 1.38629 1.38629 0.01805 4.71676 4.71676 1.46634 0.26236 0.30028 1.34942 2 1.40668 1.66915 1.09003 1.46779 2 g - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 3 1.57561 1.13161 1.29752 1.62254 3 c - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 4 1.72735 1.21518 1.48901 1.20400 4 u - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 5 1.67316 1.53871 1.53270 0.96302 5 u - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 6 1.12444 1.29450 1.75923 1.47424 6 a - - : 1.38629 1.38629 1.38629 1.38629 0.09335 4.75802 2.51901 1.46634 0.26236 1.09861 0.40547 7 1.21368 1.59442 1.23341 1.56748 7 a - - : 1.38629 1.38629 1.38629 1.38629 0.01867 4.68335 4.68335 1.46634 0.26236 0.30868 1.32583 8 1.38604 1.35528 1.25415 1.57629 8 g - - : 1.38629 1.38629 1.38629 1.38629 0.02739 4.74920 3.99780 1.46634 0.26236 1.39213 0.28574 9 1.87417 1.44715 1.45671 0.97214 9 u - - : 1.38629 1.38629 1.38629 1.38629 0.01764 4.73946 4.73946 1.46634 0.26236 0.88631 0.53132 10 1.70638 1.08820 1.66242 1.23108 10 c - - : 1.38629 1.38629 1.38629 1.38629 0.01747 4.74920 4.74920 1.46634 0.26236 0.68735 0.69898 11 2.10753 1.36819 0.98647 1.38229 11 g - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 12 2.39743 0.92971 0.95493 2.04373 12 c - - < 1.38629 1.38629 1.38629 1.38629 0.09494 4.75802 2.50111 1.46634 0.26236 1.09861 0.40547 13 1.91721 2.22502 0.41122 2.50010 13 G - - < 1.38629 1.38629 1.38629 1.38629 0.04099 3.47701 4.68178 0.51951 0.90341 0.19008 1.75385 14 3.82683 0.14328 3.67185 2.45018 15 C - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 15 3.01364 3.69245 0.09883 3.90818 16 G - - < 1.38629 1.38629 1.38629 1.38629 0.03528 4.75802 3.64633 1.46634 0.26236 1.09861 0.40547 16 0.06361 4.89908 3.12478 4.58283 17 A - - < 1.38629 1.38629 1.38629 1.38629 0.03132 4.74036 3.81212 1.46634 0.26236 0.92677 0.50390 17 3.17541 4.09273 0.08049 3.97045 18 G - - < 1.38629 1.38629 1.38629 1.38629 0.01771 4.73568 4.73568 1.46634 0.26236 0.71076 0.67584 18 4.36544 0.05384 4.56121 3.53146 19 C - - < 1.38629 1.38629 1.38629 1.38629 0.01744 4.75082 4.75082 1.46634 0.26236 1.34444 0.30203 19 0.05311 4.73790 3.43143 4.54424 20 A - - < 1.38629 1.38629 1.38629 1.38629 0.01744 4.75082 4.75082 1.46634 0.26236 1.34444 0.30203 20 3.67322 4.69783 0.04492 4.66550 21 G - - < 1.38629 1.38629 1.38629 1.38629 0.01744 4.75082 4.75082 1.46634 0.26236 1.34444 0.30203 21 0.07484 4.36949 3.50614 3.52536 22 A - - < 1.38629 1.38629 1.38629 1.38629 0.01744 4.75082 4.75082 1.46634 0.26236 0.73683 0.65129 22 4.91869 0.04023 4.90215 3.70132 23 C - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 23 2.71469 4.13358 0.10601 3.99923 24 G - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 24 4.09325 0.17695 3.96658 2.06708 25 C - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 25 0.08536 4.21994 2.91858 4.33458 26 A - - < 1.38629 1.38629 1.38629 1.38629 0.03298 4.75802 3.73563 1.46634 0.26236 1.09861 0.40547 26 0.93998 2.69781 0.86930 2.09747 27 g - - < 1.38629 1.38629 1.38629 1.38629 0.01759 4.74263 4.74263 1.46634 0.26236 0.54202 0.87126 27 0.05188 4.76912 3.44844 4.57799 28 A - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 28 0.03034 5.37448 3.94559 5.13167 29 A - - < 1.38629 1.38629 1.38629 1.38629 0.03365 3.70868 4.75802 0.59576 0.80106 1.09861 0.40547 29 2.21564 2.21506 0.84478 1.04379 31 g - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 30 2.56278 0.25282 3.04067 2.31773 32 C - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 31 1.74150 1.45236 0.80315 1.94623 33 g - - < 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 32 5.38247 0.01968 5.42858 4.55662 34 C - - < 1.38629 1.38629 1.38629 1.38629 0.02813 4.75802 3.95492 1.46634 0.26236 1.09861 0.40547 33 1.35055 0.47370 3.19694 2.55981 35 C - - < 1.38629 1.38629 1.38629 1.38629 0.01750 4.74739 4.74739 1.46634 0.26236 0.63968 0.74963 34 2.98415 0.41830 2.81102 1.46486 36 C - - < 1.38629 1.38629 1.38629 1.38629 0.07124 4.75802 2.81042 1.46634 0.26236 1.09861 0.40547 35 1.41287 1.75910 0.97678 1.57101 37 g - - < 1.38629 1.38629 1.38629 1.38629 0.10601 3.17071 2.83691 0.38655 1.13755 0.25094 1.50540 36 1.11948 1.54110 1.48940 1.45288 39 a - - < 1.38629 1.38629 1.38629 1.38629 0.01818 4.70988 4.70988 1.46634 0.26236 0.26913 1.44412 37 1.28002 1.56170 1.65685 1.13491 40 u - - < 1.38629 1.38629 1.38629 1.38629 0.03553 4.75802 3.63740 1.46634 0.26236 1.09861 0.40547 38 1.41973 1.51739 1.50158 1.15151 41 u - - < 1.38629 1.38629 1.38629 1.38629 0.03938 4.74013 3.51063 1.46634 0.26236 0.50208 0.92955 39 1.55297 1.34323 1.52814 1.16976 42 u - - < 1.38629 1.38629 1.38629 1.38629 0.01768 4.73704 4.73704 1.46634 0.26236 0.46051 0.99686 40 2.13800 0.99680 1.11563 1.68554 43 c - - < 1.38629 1.38629 1.38629 1.38629 0.05484 4.75802 3.10605 1.46634 0.26236 1.09861 0.40547 41 1.51551 1.29398 1.13026 1.69728 44 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01797 4.72116 4.72116 1.46634 0.26236 0.32450 1.28333 42 1.67369 1.62710 0.78247 1.84091 45 g - - _ 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 43 1.77227 1.21000 1.03118 1.74142 46 g - - _ 1.38629 1.38629 1.38629 1.38629 0.12616 4.75802 2.20781 1.46634 0.26236 1.09861 0.40547 44 1.46000 1.13540 1.79269 1.27311 47 c - - _ 1.38629 1.38629 1.38629 1.38629 0.35346 4.65115 1.24411 1.46634 0.26236 2.04314 0.13883 45 1.84406 1.07540 1.13842 1.71290 48 c - - _ 1.38629 1.38629 1.38629 1.38629 0.12729 2.24018 4.33663 1.46445 0.26293 0.04755 3.06959 46 1.89562 1.19697 0.91463 1.91731 54 g - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 47 1.37829 1.72111 1.15292 1.37275 55 g - - > 1.38629 1.38629 1.38629 1.38629 0.05665 3.69905 3.49558 0.59075 0.80724 1.09861 0.40547 48 1.27903 1.66642 1.36319 1.28400 57 a - - > 1.38629 1.38629 1.38629 1.38629 0.04380 4.73603 3.37910 1.46634 0.26236 0.44848 1.01777 49 1.23839 1.79985 1.36532 1.23951 58 a - - > 1.38629 1.38629 1.38629 1.38629 0.31177 4.73296 1.35073 1.46634 0.26236 1.77228 0.18626 50 1.60760 1.61508 1.36760 1.06121 59 u - - > 1.38629 1.38629 1.38629 1.38629 0.06223 3.34016 3.69272 0.56746 0.83693 0.06004 2.84260 51 1.81010 1.08271 1.65795 1.18040 61 c - - > 1.38629 1.38629 1.38629 1.38629 0.02866 4.74835 3.93298 1.46634 0.26236 0.66405 0.72312 52 1.64832 2.98520 0.38697 2.55118 62 G - - > 1.38629 1.38629 1.38629 1.38629 0.12874 2.18821 4.74715 0.14818 1.98252 0.63390 0.75612 53 2.80606 3.37972 0.45382 1.30821 64 G - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 54 4.67593 5.17408 0.02142 5.08132 65 G - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 55 2.14582 0.89999 1.28633 1.60859 66 c - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 56 2.53956 3.18270 0.23106 2.45416 67 G - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 57 1.14714 0.89996 1.98445 1.97750 68 c - - > 1.38629 1.38629 1.38629 1.38629 0.03276 3.74445 4.75802 0.61470 0.77828 1.09861 0.40547 58 5.19095 4.21200 4.83144 0.02877 70 U - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 59 4.62318 3.83451 4.50137 0.04346 71 U - - > 1.38629 1.38629 1.38629 1.38629 0.03298 3.73563 4.75802 0.60998 0.78386 1.09861 0.40547 60 2.34759 0.93313 2.49890 0.84652 73 u - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 61 3.83073 3.50955 4.38588 0.06620 74 U - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 62 2.57718 4.10744 0.12059 3.85525 75 G - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 63 4.16392 0.16485 3.96509 2.14163 76 C - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 64 3.94113 5.02542 0.03526 4.75026 77 G - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 65 3.66764 3.79930 4.18770 0.06518 78 U - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 66 4.66854 0.05711 4.56938 3.33096 79 C - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 67 4.63267 3.81424 4.50572 0.04377 80 U - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 68 3.79653 4.63303 0.04923 4.14387 81 G - - > 1.38629 1.38629 1.38629 1.38629 0.02395 4.75802 4.19435 1.46634 0.26236 1.09861 0.40547 69 3.98618 0.17025 2.90829 2.48407 82 C - - > 1.38629 1.38629 1.38629 1.38629 0.01743 4.75150 4.75150 1.46634 0.26236 0.75998 0.63050 70 4.45245 3.61166 4.51270 0.05090 83 U - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 71 3.99292 0.15527 2.78951 2.75012 84 C - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 72 2.85054 3.81519 0.11322 3.60458 85 G - - > 1.38629 1.38629 1.38629 1.38629 0.04711 3.71132 3.83624 0.59714 0.79936 1.09861 0.40547 73 2.65903 0.46435 2.10003 1.72043 87 C - - > 1.38629 1.38629 1.38629 1.38629 0.01754 4.74495 4.74495 1.46634 0.26236 0.58535 0.81398 74 2.28473 0.96025 0.90837 2.18730 88 g - - > 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 75 1.63206 1.18172 0.94430 2.21851 89 g - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 76 1.53974 1.70524 0.99299 1.45514 90 g - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 77 1.46826 1.65034 0.97848 1.60044 91 g - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 78 1.19190 1.41219 1.28206 1.74137 92 a - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 79 1.44717 1.63150 1.34315 1.17731 93 u - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 80 1.12906 1.40107 1.67995 1.41081 94 a - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 81 1.34677 1.67024 1.19718 1.38760 95 g - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 82 1.50836 1.28545 1.31762 1.45060 96 c - - : 1.38629 1.38629 1.38629 1.38629 0.01731 4.75802 4.75802 1.46634 0.26236 1.09861 0.40547 83 1.68924 1.60977 1.16239 1.19512 97 g - - : 1.38629 1.38629 1.38629 1.38629 0.00869 4.74940 * 1.46634 0.26236 0.00000 * //