# Species tree for RF00517 # Generated from Rfam version 14.10 | +--Eukaryota (2) | | | +--Metazoa (1) | | | | | +--Arthropoda (1) | | | | | +--Hexapoda (1) | | | | | +--Insecta (1) | | | | | +--Pterygota (1) | | | | | +--Neoptera (1) | | | | | +--Endopterygota (1) | | | | | +--Hymenoptera (1) | | | | | +--Apocrita (1) | | | | | +--Aculeata (1) | | | | | +--Vespoidea (1) | | | | | +--Formicidae (1) | | | | | +--Formicinae (1) | | | | | +--Lasius (1) | | | | | +--Lasius niger (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--eudicotyledons (1) | | | +--coreeudicotyledons (1) | | | +--Caryophyllales (1) | | | +--Amaranthaceae (1) | | | +--Spinacia oleracea (spinach) (1) | +--unclassifiedsequences (37) | | | +--metagenome sequence (5) | | | +--metagenomes (32) | | | +--marine metagenome (32) | +--Bacteria (587) | | | +--Proteobacteria (585) | | | | | +--Alphaproteobacteria (582) | | | | | | | +--Rhodobacterales bacterium HTCC2255 (1) | | | | | | | +--Rhizobiales bacterium WSM3557 (1) | | | | | | | +--Polymorphum gilvum SL003B-26A1 (1) | | | | | | | +--Rhodospirillales (21) | | | | | | | | | +--Acetobacteraceae (6) | | | | | | | | | | | +--Acetobacteraceae bacterium SCN 69-10 (1) | | | | | | | | | | | +--Acidisphaera (1) | | | | | | | | | | | | | +--Acidisphaera rubrifaciens HS-AP3 (1) | | | | | | | | | | | +--Acidiphilium cryptum JF-5 (1) | | | | | | | | | | | +--Acidiphilium rubrum (1) | | | | | | | | | | | +--Acidocella sp. MX-AZ02 (1) | | | | | | | | | | | +--Acidocella (1) | | | | | | | | | | | +--Acidocella aminolytica 101 = DSM 11237 (1) | | | | | | | | | +--unclassifiedRhodospirillales (4) | | | | | | | | | | | +--Rhodospirillales bacterium 70-18 (1) | | | | | | | | | | | +--Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_67_15 (1) | | | | | | | | | | | +--Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 (1) | | | | | | | | | | | +--Rhodospirillales bacterium 69-11 (1) | | | | | | | | | +--Rhodospirillaceae (11) | | | | | | | | | +--Magnetospirillum marisnigri (1) | | | | | | | | | +--Magnetospirillum moscoviense (1) | | | | | | | | | +--Magnetospirillum magneticum AMB-1 (1) | | | | | | | | | +--Phaeospirillum (1) | | | | | | | | | | | +--Phaeospirillum molischianum DSM 120 (1) | | | | | | | | | +--Pararhodospirillum (1) | | | | | | | | | | | +--Pararhodospirillum photometricum DSM 122 (1) | | | | | | | | | +--Magnetospirillum sp. XM-1 (1) | | | | | | | | | +--Rhodospirillum centenum SW (1) | | | | | | | | | +--Azospirillum amazonense Y2 (1) | | | | | | | | | +--Inquilinus (1) | | | | | | | | | | | +--Inquilinus limosus MP06 (1) | | | | | | | | | +--Skermanella (2) | | | | | | | | | +--Skermanella aerolata KACC 11604 (1) | | | | | | | | | +--Skermanella stibiiresistens SB22 (1) | | | | | | | +--Rhizobiales bacterium 8.047 (1) | | | | | | | +--Sphingomonadales (56) | | | | | | | | | +--Erythrobacteraceae (18) | | | | | | | | | | | +--Erythrobacter luteus (1) | | | | | | | | | | | +--Erythrobacter sp. HI0063 (1) | | | | | | | | | | | +--Erythrobacter longus (1) | | | | | | | | | | | +--Altererythrobacter sp. Root672 (1) | | | | | | | | | | | +--Erythrobacter litoralis (1) | | | | | | | | | | | +--Altererythrobacter sp. 66-12 (1) | | | | | | | | | | | +--Altererythrobacter xiamenensis (1) | | | | | | | | | | | +--Porphyrobacter sp. AAP60 (1) | | | | | | | | | | | +--Altererythrobacter epoxidivorans (1) | | | | | | | | | | | +--Altererythrobacter sp. JM27 (1) | | | | | | | | | | | +--Porphyrobacter (1) | | | | | | | | | | | | | +--Porphyrobacter dokdonensis DSW-74 (1) | | | | | | | | | | | +--Erythrobacter sp. HWDM-33 (1) | | | | | | | | | | | +--Erythrobacter sp. SCN 62-14 (1) | | | | | | | | | | | +--Erythrobacter sp. NAP1 (1) | | | | | | | | | | | +--Erythrobacter litoralis HTCC2594 (1) | | | | | | | | | | | +--Erythrobacter sp. SD-21 (1) | | | | | | | | | | | +--Erythrobacter atlanticus (1) | | | | | | | | | | | +--Porphyrobacter sp. HL-46 (1) | | | | | | | | | +--Sphingomonadaceae (37) | | | | | | | | | | | +--Zymomonas mobilis subsp. pomaceae ATCC 29192 (1) | | | | | | | | | | | +--Sphingomonas sp. KC8 (1) | | | | | | | | | | | +--Sphingomonas wittichii RW1 (1) | | | | | | | | | | | +--Sphingomonas sp. Root710 (1) | | | | | | | | | | | +--Sphingobium sp. LL03 (1) | | | | | | | | | | | +--Novosphingobium (1) | | | | | | | | | | | | | +--Novosphingobium tardaugens NBRC 16725 (1) | | | | | | | | | | | +--Sphingomonas sp. Ag1 (1) | | | | | | | | | | | +--Sphingomonas (2) | | | | | | | | | | | | | +--Sphingomonas sanxanigenens DSM 19645 = NX02 (1) | | | | | | | | | | | | | +--Sphingomonas changbaiensis NBRC 104936 (1) | | | | | | | | | | | +--Sphingomonas sp. 67-41 (1) | | | | | | | | | | | +--Sphingomonas sp. Root720 (1) | | | | | | | | | | | +--Sphingomonas sp. SCN 67-18 (1) | | | | | | | | | | | +--Sphingomonas sp. SRS2 (1) | | | | | | | | | | | +--Sphingomonas sp. MM-1 (1) | | | | | | | | | | | +--Sphingomonas sp. Dd16 (1) | | | | | | | | | | | +--Zymomonas mobilis subsp. mobilis ZM4 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf9 (1) | | | | | | | | | | | +--Sphingobium baderi (1) | | | | | | | | | | | +--Sphingomonas jeddahensis (1) | | | | | | | | | | | +--Novosphingobium sp. B1 (1) | | | | | | | | | | | +--Sphingomonas sp. JJ-A5 (1) | | | | | | | | | | | +--Sphingomonas mucosissima (1) | | | | | | | | | | | +--Sphingomonas taxi (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf343 (1) | | | | | | | | | | | +--Sphingomonas dokdonensis (1) | | | | | | | | | | | +--Novosphingobium sp. AAP83 (1) | | | | | | | | | | | +--Sphingomonas sp. TY (1) | | | | | | | | | | | +--Sphingomonas sp. IBVSS1 (1) | | | | | | | | | | | +--Novosphingobium aromaticivorans DSM 12444 (1) | | | | | | | | | | | +--Sphingomonas sp. LNB2 (1) | | | | | | | | | | | +--Sphingomonas sp. Leaf42 (1) | | | | | | | | | | | +--Novosphingobium subterraneum (1) | | | | | | | | | | | +--Sphingomonas sp. LM7 (1) | | | | | | | | | | | +--Novosphingobium sp. SCN 63-17 (1) | | | | | | | | | | | +--Sphingobium sp. Ant17 (1) | | | | | | | | | | | +--Sphingobium (1) | | | | | | | | | | | | | +--Sphingobium japonicum BiD32 (1) | | | | | | | | | | | +--Pacificimonas flava (1) | | | | | | | | | +--Sphingomonadales bacterium GWF1_63_6 (1) | | | | | | | +--Sneathiellales (1) | | | | | | | | | +--Sneathiellaceae (1) | | | | | | | | | +--Sneathiella sp. BFLP-8 (1) | | | | | | | +--unclassifiedAlphaproteobacteria (14) | | | | | | | | | +--Alphaproteobacteria bacterium RIFOXYD12_FULL_60_8 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 13_2_20CM_2_64_7 (1) | | | | | | | | | +--alpha proteobacterium AAP38 (1) | | | | | | | | | +--alpha proteobacterium AAP81b (1) | | | | | | | | | +--Alphaproteobacteria bacterium 62-8 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 64-11 (1) | | | | | | | | | +--Alphaproteobacteria bacterium BRH_c36 (1) | | | | | | | | | +--alpha proteobacterium Q-1 (1) | | | | | | | | | +--alpha proteobacterium IMCC14465 (1) | | | | | | | | | +--Alphaproteobacteria bacterium MedPE-SWcel (1) | | | | | | | | | +--Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 65-7 (1) | | | | | | | | | +--Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_66_14 (1) | | | | | | | | | +--Alphaproteobacteria bacterium 65-37 (1) | | | | | | | +--Rhizobiales (228) | | | | | | | | | +--Bartonellaceae (2) | | | | | | | | | | | +--Bartonella apis (1) | | | | | | | | | | | +--Bartonella (1) | | | | | | | | | | | +--Bartonella tamiae Th239 (1) | | | | | | | | | +--Brucellaceae (6) | | | | | | | | | | | +--Ochrobactrum (1) | | | | | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | | | | | +--Brucella melitensis biovar Abortus 2308 (1) | | | | | | | | | | | +--Brucella melitensis bv. 1 str. 16M (1) | | | | | | | | | | | +--Ochrobactrum pseudogrignonense (1) | | | | | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (1) | | | | | | | | | | | +--Ochrobactrum sp. P6BS-III (1) | | | | | | | | | +--Bradyrhizobiaceae bacterium SG-6C (1) | | | | | | | | | +--Aurantimonadaceae (16) | | | | | | | | | | | +--Martelella sp. AD-3 (1) | | | | | | | | | | | +--Aurantimonas manganoxydans SI85-9A1 (2) | | | | | | | | | | | +--Aureimonas sp. Leaf454 (1) | | | | | | | | | | | +--Aurantimonas ureilytica (1) | | | | | | | | | | | +--Aurantimonas sp. USBA 369 (1) | | | | | | | | | | | +--Aurantimonas altamirensis (1) | | | | | | | | | | | +--Aurantimonas sp. Leaf443 (1) | | | | | | | | | | | +--Martelella endophytica (1) | | | | | | | | | | | +--Aureimonas sp. Leaf324 (1) | | | | | | | | | | | +--Aureimonas sp. AU20 (1) | | | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (1) | | | | | | | | | | | +--Aureimonas sp. Leaf460 (1) | | | | | | | | | | | +--Fulvimarina pelagi HTCC2506 (2) | | | | | | | | | | | +--Martelella (1) | | | | | | | | | | | +--Martelella mediterranea DSM 17316 (1) | | | | | | | | | +--Phyllobacteriaceae (40) | | | | | | | | | | | +--Mesorhizobium sp. L48C026A00 (1) | | | | | | | | | | | +--Mesorhizobium loti MAFF303099 (2) | | | | | | | | | | | +--Mesorhizobium sp. LC103 (1) | | | | | | | | | | | +--Mesorhizobium loti (1) | | | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | | | +--Hoeflea olei (1) | | | | | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | | | | | +--Mesorhizobium australicum (1) | | | | | | | | | | | +--Pseudaminobacter manganicus (1) | | | | | | | | | | | +--Mesorhizobium sp. Root554 (1) | | | | | | | | | | | +--Mesorhizobium amorphae CCNWGS0123 (1) | | | | | | | | | | | +--Hoeflea phototrophica DFL-43 (1) | | | | | | | | | | | +--Aquamicrobium defluvii (1) | | | | | | | | | | | +--Mesorhizobium sp. SOD10 (1) | | | | | | | | | | | +--Mesorhizobium ciceri biovar biserrulae WSM1271 (1) | | | | | | | | | | | +--Aminobacter sp. Root100 (1) | | | | | | | | | | | +--Nitratireductor (2) | | | | | | | | | | | | | +--Nitratireductor aquibiodomus RA22 (1) | | | | | | | | | | | | | +--Nitratireductor indicus C115 (1) | | | | | | | | | | | +--Parvibaculum lavamentivorans DS-1 (2) | | | | | | | | | | | +--Nitratireductor basaltis (1) | | | | | | | | | | | +--Nitratireductor sp. Pht-3B (1) | | | | | | | | | | | +--Phyllobacterium sp. YR531 (1) | | | | | | | | | | | +--Hoeflea sp. BRH_c9 (1) | | | | | | | | | | | +--Mesorhizobium sp. B7 (1) | | | | | | | | | | | +--Mesorhizobium sp. UASWS1009 (1) | | | | | | | | | | | +--Mesorhizobium sp. Root157 (2) | | | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | | | +--Mesorhizobium (3) | | | | | | | | | | | | | +--Mesorhizobium huakuii 7653R (1) | | | | | | | | | | | | | +--Mesorhizobium alhagi CCNWXJ12-2 (1) | | | | | | | | | | | | | +--Mesorhizobium metallidurans STM 2683 (1) | | | | | | | | | | | +--Mesorhizobium sp. 65-26 (1) | | | | | | | | | | | +--Hoeflea sp. IMCC20628 (1) | | | | | | | | | | | +--Mesorhizobium loti R7A (1) | | | | | | | | | | | +--Hoeflea sp. BAL378 (1) | | | | | | | | | | | +--Mesorhizobium sp. LNHC252B00 (1) | | | | | | | | | | | +--Chelativorans sp. BNC1 (2) | | | | | | | | | +--unclassifiedRhizobiales (18) | | | | | | | | | | | +--Rhizobiales bacterium 63-22 (1) | | | | | | | | | | | +--Methylobrevis pamukkalensis (1) | | | | | | | | | | | +--Rhizobiales bacterium 63-7 (1) | | | | | | | | | | | +--Rhizobiales bacterium 65-9 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED28 (1) | | | | | | | | | | | +--Rhizobiales bacterium 62-47 (1) | | | | | | | | | | | +--Rhizobiales bacterium 68-8 (1) | | | | | | | | | | | +--Rhizobiales bacterium 64-17 (1) | | | | | | | | | | | +--Rhizobiales bacterium HL-109 (1) | | | | | | | | | | | +--Rhizobiales bacterium 62-17 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED94 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED143 (1) | | | | | | | | | | | +--Rhizobiales bacterium 65-79 (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED29 (1) | | | | | | | | | | | +--Rhizobiales bacterium NRL2 (1) | | | | | | | | | | | +--Pseudorhodoplanes sinuspersici (1) | | | | | | | | | | | +--Rhizobiales bacterium TMED25 (1) | | | | | | | | | | | +--Candidatus Tokpelaia hoelldoblerii (1) | | | | | | | | | +--Hyphomicrobiaceae (13) | | | | | | | | | | | +--Devosia sp. Root413D1 (1) | | | | | | | | | | | +--Rhodoplanes sp. Z2-YC6860 (1) | | | | | | | | | | | +--Hyphomicrobium sp. SCN 65-11 (1) | | | | | | | | | | | +--Devosia sp. 66-22 (1) | | | | | | | | | | | +--Devosia epidermidihirudinis (1) | | | | | | | | | | | +--Devosia sp. H5989 (1) | | | | | | | | | | | +--Rhodomicrobium vannielii ATCC 17100 (1) | | | | | | | | | | | +--Pelagibacterium halotolerans B2 (1) | | | | | | | | | | | +--Candidatus Filomicrobium marinum (1) | | | | | | | | | | | +--Devosia geojensis (1) | | | | | | | | | | | +--Blastochloris viridis (1) | | | | | | | | | | | +--Hyphomicrobium denitrificans 1NES1 (1) | | | | | | | | | | | +--Prosthecomicrobium hirschii (1) | | | | | | | | | +--Rhodobiaceae (2) | | | | | | | | | | | +--Tepidicaulis marinus (1) | | | | | | | | | | | +--Candidatus Phaeomarinobacter ectocarpi (1) | | | | | | | | | +--Xanthobacteraceae (5) | | | | | | | | | | | +--Starkeya novella DSM 506 (1) | | | | | | | | | | | +--Xanthobacter autotrophicus Py2 (1) | | | | | | | | | | | +--Pseudolabrys sp. Root1462 (1) | | | | | | | | | | | +--Pseudoxanthobacter (1) | | | | | | | | | | | | | +--Pseudoxanthobacter soli DSM 19599 (1) | | | | | | | | | | | +--Azorhizobium caulinodans ORS 571 (1) | | | | | | | | | +--Rhizobiaceae (58) | | | | | | | | | | | +--Kaistia (1) | | | | | | | | | | | | | +--Kaistia soli DSM 19436 (1) | | | | | | | | | | | +--Shinella sp. HZN7 (1) | | | | | | | | | | | +--Shinella sp. DD12 (1) | | | | | | | | | | | +--Kaistia sp. SCN 65-12 (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (10) | | | | | | | | | | | | | +--Sinorhizobium saheli (1) | | | | | | | | | | | | | +--Ensifer (1) | | | | | | | | | | | | | | | +--Ensifer adhaerens OV14 (1) | | | | | | | | | | | | | +--Ensifer sp. Root278 (1) | | | | | | | | | | | | | +--Ensifer sp. LCM 4579 (1) | | | | | | | | | | | | | +--Sinorhizobium sp. RAC02 (1) | | | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (2) | | | | | | | | | | | | | +--Sinorhizobium fredii NGR234 (1) | | | | | | | | | | | | | +--Ensifer sp. YIC4027 (1) | | | | | | | | | | | | | +--Sinorhizobium fredii GR64 (1) | | | | | | | | | | | +--Liberibacter (1) | | | | | | | | | | | | | +--Liberibacter crescens BT-1 (1) | | | | | | | | | | | +--Shinella sp. 65-6 (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (42) | | | | | | | | | | | +--Rhizobium sp. Leaf306 (1) | | | | | | | | | | | +--Rhizobium sp. CCNWSX0483 (1) | | | | | | | | | | | +--Rhizobium lusitanum (1) | | | | | | | | | | | +--Rhizobium sp. RU36D (1) | | | | | | | | | | | +--Rhizobium sp. Root149 (1) | | | | | | | | | | | +--Rhizobium sp. Leaf453 (1) | | | | | | | | | | | +--Rhizobium sp. R72 (1) | | | | | | | | | | | +--Rhizobium sp. NT-26 (1) | | | | | | | | | | | +--Rhizobium (3) | | | | | | | | | | | | | +--Rhizobiumgallicum (1) | | | | | | | | | | | | | | | +--Rhizobium gallicum bv. gallicum R602 (1) | | | | | | | | | | | | | +--Rhizobium freirei PRF 81 (1) | | | | | | | | | | | | | +--Rhizobium mesoamericanum STM3625 (1) | | | | | | | | | | | +--Rhizobium rhizosphaerae (1) | | | | | | | | | | | +--Rhizobium yanglingense (1) | | | | | | | | | | | +--Rhizobium sp. CF080 (1) | | | | | | | | | | | +--Rhizobium etli CFN 42 (1) | | | | | | | | | | | +--Agrobacterium (1) | | | | | | | | | | | | | +--Agrobacterium albertimagni AOL15 (1) | | | | | | | | | | | +--Rhizobium sp. 58 (1) | | | | | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | | | | | +--Rhizobium sp. Root1212 (1) | | | | | | | | | | | +--Agrobacterium tumefaciens str. C58 (2) | | | | | | | | | | | +--Rhizobium sp. PDO1-076 (1) | | | | | | | | | | | +--Rhizobium sp. Root482 (1) | | | | | | | | | | | +--Rhizobium tibeticum (1) | | | | | | | | | | | +--Agrobacterium radiobacter K84 (1) | | | | | | | | | | | +--Rhizobium sp. Pop5 (1) | | | | | | | | | | | +--Rhizobium sp. YS-1r (1) | | | | | | | | | | | +--Rhizobium oryzae (1) | | | | | | | | | | | +--Agrobacterium sp. DSM 25559 (1) | | | | | | | | | | | +--Rhizobium oryziradicis (1) | | | | | | | | | | | +--Rhizobium sp. AC27/96 (1) | | | | | | | | | | | +--Rhizobium sp. Leaf371 (1) | | | | | | | | | | | +--Rhizobium sp. CF142 (1) | | | | | | | | | | | +--Pseudorhizobium pelagicum (1) | | | | | | | | | | | +--Agrobacterium vitis S4 (1) | | | | | | | | | | | +--Rhizobium sp. Root708 (1) | | | | | | | | | | | +--Rhizobium sp. 63-7 (1) | | | | | | | | | | | +--Rhizobium sp. Root564 (1) | | | | | | | | | | | +--Rhizobium leguminosarum bv. viciae 3841 (1) | | | | | | | | | | | +--Rhizobium sp. LC145 (1) | | | | | | | | | | | +--Rhizobium sp. Root483D2 (1) | | | | | | | | | | | +--Rhizobium etli CNPAF512 (1) | | | | | | | | | +--Methylobacteriaceae (14) | | | | | | | | | | | +--Methylobacterium sp. Leaf93 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf104 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf456 (1) | | | | | | | | | | | +--Methylobacterium sp. 4-46 (2) | | | | | | | | | | | +--Microvirga vignae (1) | | | | | | | | | | | +--Methylobacterium nodulans ORS 2060 (1) | | | | | | | | | | | +--Methylobacterium extorquens AM1 (1) | | | | | | | | | | | +--Microvirga sp. BSC39 (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf99 (1) | | | | | | | | | | | +--Microvirga ossetica (1) | | | | | | | | | | | +--Methylobacterium sp. Leaf399 (1) | | | | | | | | | | | +--Methylobacterium tarhaniae (1) | | | | | | | | | | | +--Methylobacterium indicum (1) | | | | | | | | | +--Phyllobacteriaceae bacterium AMV1 (1) | | | | | | | | | +--Bradyrhizobiaceae (49) | | | | | | | | | | | +--Bradyrhizobium sp. BR 10245 (1) | | | | | | | | | | | +--Bosea sp. Root381 (1) | | | | | | | | | | | +--Bosea sp. 67-29 (1) | | | | | | | | | | | +--Bradyrhizobium sp. STM 3843 (1) | | | | | | | | | | | +--Bosea vaviloviae (1) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP849 (1) | | | | | | | | | | | +--Bosea sp. AAP35 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris BisA53 (1) | | | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (2) | | | | | | | | | | | +--Bradyrhizobium sp. Leaf396 (1) | | | | | | | | | | | +--Bosea sp. RAC05 (1) | | | | | | | | | | | +--Bradyrhizobium erythrophlei (1) | | | | | | | | | | | +--Afipia (1) | | | | | | | | | | | | | +--Afipia broomeae ATCC 49717 (1) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP885 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris BisB18 (1) | | | | | | | | | | | +--Rhodopseudomonas sp. R-45977 (1) | | | | | | | | | | | +--Afipia sp. 64-13 (1) | | | | | | | | | | | +--Bradyrhizobium lablabi (1) | | | | | | | | | | | +--Bradyrhizobium sp. NAS80.1 (1) | | | | | | | | | | | +--Bosea sp. WAO (1) | | | | | | | | | | | +--Bradyrhizobium yuanmingense (1) | | | | | | | | | | | +--Nitrobacter hamburgensis X14 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris BisB5 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris (1) | | | | | | | | | | | +--Afipia sp. GAS231 (1) | | | | | | | | | | | +--Afipia sp. P52-10 (1) | | | | | | | | | | | +--Bradyrhizobium elkanii (1) | | | | | | | | | | | +--Bradyrhizobium sp. ORS 278 (2) | | | | | | | | | | | +--Nitrobacter sp. 62-23 (1) | | | | | | | | | | | +--Bosea sp. Leaf344 (1) | | | | | | | | | | | +--Bradyrhizobium sp. AS23.2 (1) | | | | | | | | | | | +--Bosea sp. PAMC 26642 (1) | | | | | | | | | | | +--Bosea sp. TND4EK4 (1) | | | | | | | | | | | +--Afipia sp. 62-7 (1) | | | | | | | | | | | +--Bosea thiooxidans (1) | | | | | | | | | | | +--Bradyrhizobium sp. S23321 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris HaA2 (1) | | | | | | | | | | | +--Nitrobacter winogradskyi Nb-255 (1) | | | | | | | | | | | +--Oligotropha carboxidovorans OM5 (1) | | | | | | | | | | | +--Bradyrhizobium sp. BR3351 (1) | | | | | | | | | | | +--Bosea sp. Root483D1 (1) | | | | | | | | | | | +--Bosea sp. LC85 (1) | | | | | | | | | | | +--Afipia sp. Root123D2 (1) | | | | | | | | | | | +--Rhodopseudomonas palustris CGA009 (2) | | | | | | | | | | | +--Nitrobacter sp. Nb-311A (2) | | | | | | | | | +--Beijerinckiaceae (3) | | | | | | | | | +--Methylocella silvestris BL2 (1) | | | | | | | | | +--Chelatococcus sp. CO-6 (1) | | | | | | | | | +--Beijerinckia indica subsp. indica ATCC 9039 (1) | | | | | | | +--Caulobacterales (14) | | | | | | | | | +--Caulobacterales bacterium 68-7 (1) | | | | | | | | | +--Caulobacteraceae (13) | | | | | | | | | +--Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_70_10 (1) | | | | | | | | | +--Caulobacter henricii (1) | | | | | | | | | +--Caulobacter crescentus CB15 (1) | | | | | | | | | +--Phenylobacterium zucineum (1) | | | | | | | | | +--Caulobacter vibrioides (1) | | | | | | | | | +--Caulobacteraceae bacterium OTSz_A_272 (1) | | | | | | | | | +--Caulobacter sp. K31 (1) | | | | | | | | | +--Phenylobacterium sp. SCN 69-14 (1) | | | | | | | | | +--Phenylobacterium zucineum HLK1 (1) | | | | | | | | | +--Caulobacter segnis ATCC 21756 (1) | | | | | | | | | +--Phenylobacterium sp. RIFCSPHIGHO2_01_FULL_69_31 (1) | | | | | | | | | +--Phenylobacterium sp. SCN 70-31 (1) | | | | | | | | | +--Phenylobacterium sp. Root1277 (1) | | | | | | | +--Kordiimonadales (1) | | | | | | | | | +--Kordiimonas sp. S3-22 (1) | | | | | | | +--Rhodobacterales (243) | | | | | | | +--Hyphomonadaceae (8) | | | | | | | | | +--Hyphomonas sp. T16B2 (1) | | | | | | | | | +--Hyphomonadaceae bacterium BRH_c29 (1) | | | | | | | | | +--Hyphomonadaceae bacterium UKL13-1 (1) | | | | | | | | | +--Hyphomonas sp. L-53-1-40 (1) | | | | | | | | | +--Hirschia baltica ATCC 49814 (1) | | | | | | | | | +--Hyphomonas sp. BRH_c22 (1) | | | | | | | | | +--Hyphomonas (1) | | | | | | | | | | | +--Hyphomonas johnsonii MHS-2 (1) | | | | | | | | | +--Hyphomonas neptunium ATCC 15444 (1) | | | | | | | +--Rhodobacterales bacterium RIFCSPHIGHO2_02_FULL_62_130 (1) | | | | | | | +--Rhodobacterales bacterium 65-51 (1) | | | | | | | +--Rhodobacteraceae bacterium SH6-1 (2) | | | | | | | +--Rhodobacteraceae bacterium KLH11 (1) | | | | | | | +--Rhodobacteraceae bacterium RCA23 (1) | | | | | | | +--Rhodobacterales bacterium CG2_30_65_12 (1) | | | | | | | +--Rhodobacteraceae bacterium HTCC2083 (1) | | | | | | | +--Rhodobacteraceae (224) | | | | | | | | | +--Celeribacter (1) | | | | | | | | | | | +--Celeribacter baekdonensis B30 (1) | | | | | | | | | +--Sulfitobacter sp. CB2047 (1) | | | | | | | | | +--Roseisalinus antarcticus (1) | | | | | | | | | +--Ponticoccus sp. SJ5A-1 (1) | | | | | | | | | +--Thalassobius sp. CECT 5114 (1) | | | | | | | | | +--Ruegeria sp. TM1040 (2) | | | | | | | | | +--Thiobacimonas profunda (1) | | | | | | | | | +--Thalassobacter sp. 16PALIMAR09 (1) | | | | | | | | | +--Tropicibacter (1) | | | | | | | | | | | +--Tropicibacter litoreus R37 (1) | | | | | | | | | +--Roseovarius (1) | | | | | | | | | | | +--Roseovarius mucosus DSM 17069 (1) | | | | | | | | | +--Oceanicola batsensis HTCC2597 (2) | | | | | | | | | +--Celeribacter marinus (1) | | | | | | | | | +--Puniceibacterium sp. IMCC21224 (1) | | | | | | | | | +--Marivita geojedonensis (1) | | | | | | | | | +--Sagittula stellata E-37 (2) | | | | | | | | | +--Nesiotobacter exalbescens (1) | | | | | | | | | +--Thioclava sp. SK-1 (1) | | | | | | | | | +--Labrenzia sp. C1B10 (1) | | | | | | | | | +--Rhodovulum sulfidophilum (1) | | | | | | | | | +--Loktanella marina (1) | | | | | | | | | +--Rhodobacter capsulatus SB 1003 (1) | | | | | | | | | +--Rubellimicrobium sp. MSL 20 (1) | | | | | | | | | +--Roseovarius pacificus (1) | | | | | | | | | +--Aquimixticola soesokkakensis (1) | | | | | | | | | +--Thioclava (1) | | | | | | | | | | | +--Thioclava pacifica DSM 10166 (1) | | | | | | | | | +--Marivita cryptomonadis (1) | | | | | | | | | +--Roseivivax atlanticus (1) | | | | | | | | | +--Maritimibacter alkaliphilus HTCC2654 (1) | | | | | | | | | +--Actibacterium (1) | | | | | | | | | | | +--Actibacterium mucosum KCTC 23349 (1) | | | | | | | | | +--Ruegeria sp. ANG-S4 (1) | | | | | | | | | +--Jannaschia rubra (1) | | | | | | | | | +--Boseongicola aestuarii (1) | | | | | | | | | +--Ruegeria atlantica (1) | | | | | | | | | +--Roseovarius sp. A-2 (1) | | | | | | | | | +--Antarctobacter sp. JLT354-W (1) | | | | | | | | | +--Rhodobacteraceae bacterium HLUCCA12 (1) | | | | | | | | | +--Paracoccus sediminis (1) | | | | | | | | | +--Roseivivax (2) | | | | | | | | | | | +--Roseivivax isoporae LMG 25204 (1) | | | | | | | | | | | +--Roseivivax halodurans JCM 10272 (1) | | | | | | | | | +--Loktanella sp. S4079 (1) | | | | | | | | | +--Phaeobacter gallaeciensis DSM 17395 (1) | | | | | | | | | +--Rhodobacteraceae bacterium PD-2 (1) | | | | | | | | | +--Rhodobacter sp. SW2 (1) | | | | | | | | | +--Paracoccus denitrificans PD1222 (1) | | | | | | | | | +--Rhodobacter vinaykumarii (1) | | | | | | | | | +--Ruegeria meonggei (1) | | | | | | | | | +--Pelagicola litorisediminis (1) | | | | | | | | | +--Roseovarius sp. 217 (1) | | | | | | | | | +--Maritimibacter sp. HL-12 (1) | | | | | | | | | +--Octadecabacter temperatus (2) | | | | | | | | | +--Labrenzia alba (1) | | | | | | | | | +--Maribius salinus (1) | | | | | | | | | +--Defluviimonas alba (1) | | | | | | | | | +--Pseudovibrio sp. FO-BEG1 (1) | | | | | | | | | +--Paracoccus sp. Zy-3 (1) | | | | | | | | | +--Actibacterium atlanticum (1) | | | | | | | | | +--Citreicella sp. SE45 (1) | | | | | | | | | +--Rhodovulum sp. PH10 (1) | | | | | | | | | +--Roseobacter denitrificans OCh 114 (2) | | | | | | | | | +--Rhodobacteraceae bacterium SB2 (1) | | | | | | | | | +--Roseovarius aestuarii (1) | | | | | | | | | +--Paracoccus sp. SM22M-07 (1) | | | | | | | | | +--Loktanella sp. 1ANDIMAR09 (1) | | | | | | | | | +--Marinovum (1) | | | | | | | | | | | +--Marinovum algicola DG 898 (1) | | | | | | | | | +--Pelagibaca bermudensis HTCC2601 (2) | | | | | | | | | +--Roseovarius albus (1) | | | | | | | | | +--Halocynthiibacter arcticus (1) | | | | | | | | | +--Palleronia marisminoris (1) | | | | | | | | | +--Oceanibulbus sp. HI0023 (1) | | | | | | | | | +--Pelagibaca abyssi (1) | | | | | | | | | +--Roseobacter sp. MedPE-SWchi (1) | | | | | | | | | +--Thalassobius mediterraneus (1) | | | | | | | | | +--Jannaschia sp. CCS1 (2) | | | | | | | | | +--Roseivivax jejudonensis (1) | | | | | | | | | +--Roseovarius halotolerans (1) | | | | | | | | | +--Loktanella vestfoldensis SKA53 (2) | | | | | | | | | +--Roseovarius nubinhibens ISM (2) | | | | | | | | | +--Rhodobacteraceae bacterium HLUCCO18 (1) | | | | | | | | | +--Roseobacter sp. GAI101 (1) | | | | | | | | | +--Jannaschia donghaensis (1) | | | | | | | | | +--Sulfitobacter (1) | | | | | | | | | | | +--Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 (1) | | | | | | | | | +--Pseudooceanicola flagellatus (1) | | | | | | | | | +--Roseovarius sp. NH52J (1) | | | | | | | | | +--Pseudopelagicola gijangensis (1) | | | | | | | | | +--Pseudooctadecabacter jejudonensis (1) | | | | | | | | | +--Roseobacter sp. SK209-2-6 (2) | | | | | | | | | +--Pseudorhodobacter sp. ZS3-33 (1) | | | | | | | | | +--Citreicella sp. 357 (1) | | | | | | | | | +--Rhodovulum sp. P5 (1) | | | | | | | | | +--Shimia sp. SK013 (1) | | | | | | | | | +--Oceanibulbus indolifex HEL-45 (1) | | | | | | | | | +--Roseovarius tolerans (1) | | | | | | | | | +--Phaeobacter sp. CECT 5382 (1) | | | | | | | | | +--Wenxinia saemankumensis (1) | | | | | | | | | +--Labrenzia sp. YC6927 (1) | | | | | | | | | +--Rhodobacteraceae bacterium HL-91 (1) | | | | | | | | | +--Tropicibacter naphthalenivorans (1) | | | | | | | | | +--Aestuariivita atlantica (1) | | | | | | | | | +--Tropicimonas sp. M97 (1) | | | | | | | | | +--Paracoccus yeei (1) | | | | | | | | | +--Ahrensia sp. R2A130 (1) | | | | | | | | | +--Loktanella (2) | | | | | | | | | | | +--Loktanella cinnabarina LL-001 (1) | | | | | | | | | | | +--Loktanella hongkongensis DSM 17492 (1) | | | | | | | | | +--Roseobacter sp. CCS2 (1) | | | | | | | | | +--Ketogulonicigenium vulgare Y25 (1) | | | | | | | | | +--Paracoccus seriniphilus (1) | | | | | | | | | +--Paracoccus sp. 228 (1) | | | | | | | | | +--Roseovarius sp. 22II1-1F6A (1) | | | | | | | | | +--Ruegeria sp. ZGT118 (1) | | | | | | | | | +--Rhodobacter sp. LPB0142 (1) | | | | | | | | | +--Salipiger (1) | | | | | | | | | | | +--Salipiger mucosus DSM 16094 (1) | | | | | | | | | +--Pannonibacter phragmitetus (1) | | | | | | | | | +--Stappia sp. 22II-S9-Z10 (1) | | | | | | | | | +--Rhodovulum sp. ES.010 (1) | | | | | | | | | +--Rhodobacteraceae bacterium EhC02 (1) | | | | | | | | | +--Thioclava indica (1) | | | | | | | | | +--Pseudoruegeria aquimaris (1) | | | | | | | | | +--Silicibacter lacuscaerulensis ITI-1157 (1) | | | | | | | | | +--Loktanella vestfoldensis (1) | | | | | | | | | +--Antarctobacter heliothermus (1) | | | | | | | | | +--Sulfitobacter mediterraneus (1) | | | | | | | | | +--Phaeobacter gallaeciensis (1) | | | | | | | | | +--Ruegeria sp. CECT 5091 (1) | | | | | | | | | +--Nereida ignava (1) | | | | | | | | | +--Litoreibacter (1) | | | | | | | | | | | +--Litoreibacter arenae DSM 19593 (1) | | | | | | | | | +--Roseobacter sp. MED193 (1) | | | | | | | | | +--Sulfitobacter sp. AM1-D1 (1) | | | | | | | | | +--Thalassobius sp. GSW-6 (1) | | | | | | | | | +--Rubellimicrobium (1) | | | | | | | | | | | +--Rubellimicrobium thermophilum DSM 16684 (1) | | | | | | | | | +--Phaeobacter sp. G4 (1) | | | | | | | | | +--Phaeobacter sp. CECT 7735 (1) | | | | | | | | | +--Paracoccus solventivorans (1) | | | | | | | | | +--Paracoccus halophilus (1) | | | | | | | | | +--Loktanella sp. 3ANDIMAR09 (1) | | | | | | | | | +--Ruegeria sp. ZGT108 (1) | | | | | | | | | +--Candidatus Rhodobacter lobularis (1) | | | | | | | | | +--Ahrensia marina (1) | | | | | | | | | +--Jannaschia seosinensis (1) | | | | | | | | | +--Marivita sp. DPG-28 (1) | | | | | | | | | +--Leisingera (1) | | | | | | | | | | | +--Leisingera methylohalidivorans DSM 14336 (1) | | | | | | | | | +--Roseovarius sp. B108 (1) | | | | | | | | | +--Roseibium sp. TrichSKD4 (2) | | | | | | | | | +--Ruegeria sp. ANG-R (1) | | | | | | | | | +--Roseivivax sp. S5-5 (1) | | | | | | | | | +--Paracoccus contaminans (1) | | | | | | | | | +--Sulfitobacter geojensis (1) | | | | | | | | | +--Thalassobius gelatinovorus (1) | | | | | | | | | +--Roseovarius azorensis (1) | | | | | | | | | +--Rhodobacteraceae bacterium HLUCCA08 (1) | | | | | | | | | +--Rhodobacter sphaeroides 2.4.1 (2) | | | | | | | | | +--Celeribacter indicus (1) | | | | | | | | | +--Oceanicola litoreus (1) | | | | | | | | | +--Paracoccus sp. J56 (1) | | | | | | | | | +--Loktanella atrilutea (1) | | | | | | | | | +--Jannaschia sp. GSW-M26 (1) | | | | | | | | | +--Donghicola sp. KarMa (1) | | | | | | | | | +--Catellibacterium sp. CF17 (1) | | | | | | | | | +--Roseibacterium (1) | | | | | | | | | | | +--Roseibacterium elongatum DSM 19469 (1) | | | | | | | | | +--Thalassiobium sp. R2A62 (1) | | | | | | | | | +--Rhodobacter sp. BACL10 MAG-120910-bin24 (1) | | | | | | | | | +--Rhodovulum sp. NI22 (1) | | | | | | | | | +--Donghicola sp. JL3646 (1) | | | | | | | | | +--Paracoccus halotolerans (1) | | | | | | | | | +--Tateyamaria sp. ANG-S1 (1) | | | | | | | | | +--Thioclava atlantica (1) | | | | | | | | | +--Confluentimicrobium lipolyticum (1) | | | | | | | | | +--Rhodobacter aestuarii (1) | | | | | | | | | +--Maliponia aquimaris (1) | | | | | | | | | +--Roseovarius sp. HDW-9 (1) | | | | | | | | | +--Roseovarius sp. H50 (1) | | | | | | | | | +--Labrenzia alexandrii DFL-11 (1) | | | | | | | | | +--Yangia sp. CCB-MM3 (1) | | | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | | | +--Sulfitobacter pseudonitzschiae (1) | | | | | | | | | +--Defluviimonas sp. 20V17 (1) | | | | | | | | | +--Loktanella soesokkakensis (1) | | | | | | | | | +--Labrenzia sp. OB1 (1) | | | | | | | | | +--Labrenzia aggregata IAM 12614 (1) | | | | | | | | | +--Thioclava dalianensis (1) | | | | | | | | | +--Paracoccus aminovorans (1) | | | | | | | | | +--Pseudoruegeria sp. ZXM137 (1) | | | | | | | | | +--Paracoccus (1) | | | | | | | | | | | +--Paracoccus aminophilus JCM 7686 (1) | | | | | | | | | +--Labrenzia sp. VG12 (1) | | | | | | | | | +--Dinoroseobacter shibae DFL 12 (1) | | | | | | | | | +--Roseovarius sp. BRH_c41 (1) | | | | | | | | | +--Pseudooceanicola atlanticus (1) | | | | | | | | | +--Oceanicola granulosus HTCC2516 (2) | | | | | | | | | +--Pseudoruegeria sp. SK021 (1) | | | | | | | | | +--Oceaniovalibus (1) | | | | | | | | | | | +--Oceaniovalibus guishaninsula JLT2003 (1) | | | | | | | | | +--Rhodobacteraceae bacterium O3.65 (1) | | | | | | | | | +--Roseovarius atlanticus (1) | | | | | | | | | +--Roseovarius sp. TM1035 (1) | | | | | | | | | +--Octadecabacter antarcticus 307 (1) | | | | | | | | | +--Thioclava nitratireducens (1) | | | | | | | | | +--Oceanicola marinus (1) | | | | | | | | | +--Rhodobacteraceae bacterium GWF1_65_7 (1) | | | | | | | | | +--Paracoccus sanguinis (1) | | | | | | | | | +--Xuhuaishuia manganoxidans (1) | | | | | | | | | +--Rhodobacter sp. DW2-9 (1) | | | | | | | | | +--Rhodobacteraceae bacterium HIMB11 (1) | | | | | | | | | +--Wenxinia (1) | | | | | | | | | | | +--Wenxinia marina DSM 24838 (1) | | | | | | | | | +--Roseobacter sp. AzwK-3b (2) | | | | | | | | | +--Ruegeria pomeroyi DSS-3 (1) | | | | | | | | | +--Rhodobacter sp. CACIA14H1 (1) | | | | | | | | | +--Loktanella sediminum (1) | | | | | | | | | +--Tropicibacter sp. CECT 7557 (1) | | | | | | | | | +--Sedimentitalea nanhaiensis (1) | | | | | | | | | +--Sulfitobacter sp. EhC04 (1) | | | | | | | | | +--Stappia sp. ES.058 (1) | | | | | | | | | +--Roseovarius crassostreae (1) | | | | | | | +--Shimia marina (1) | | | | | | | +--Rhodobacteraceae bacterium HTCC2150 (2) | | | | | +--unclassifiedProteobacteria (3) | | | | | +--Proteobacteria bacterium SG_bin9 (1) | | | | | +--Proteobacteria bacterium HN_bin10 (1) | | | | | +--Proteobacteria bacterium SG_bin8 (1) | | | +--Terrabacteriagroup (1) | | | | | +--Cyanobacteria/Melainabacteriagroup (1) | | | | | +--Cyanobacteria (1) | | | | | +--Oscillatoriophycideae (1) | | | | | +--Oscillatoriales (1) | | | | | +--Oscillatoriaceae (1) | | | | | +--Lyngbya (1) | | | | | +--Lyngbya confervoides BDU141951 (1) | | | +--FCBgroup (1) | | | +--Bacteroidetes/Chlorobigroup (1) | | | +--Bacteroidetes (1) | | | +--Flavobacteriia (1) | | | +--Flavobacteriales (1) | | | +--Flavobacteriaceae (1) | | | +--Flavobacteriaceae bacterium TMED206 (1) | +--Archaea (1) | +--Euryarchaeota (1) | +--unclassifiedEuryarchaeota (1) | +--Euryarchaeota archaeon TMED132 (1)