# Species tree for RF01070 # Generated from Rfam version 14.10 | +--Eukaryota (3) | | | +--Euglenozoa (2) | | | | | +--Kinetoplastida (2) | | | | | +--Trypanosomatidae (2) | | | | | +--Strigomonas culicis (2) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--Liliopsida (1) | | | +--Poales (1) | | | +--Poaceae (1) | | | +--BEPclade (1) | | | +--Ehrhartoideae (1) | | | +--Oryzeae (1) | | | +--Oryza sativa Indica Group (1) | +--unclassifiedsequences (9) | | | +--metagenome sequence (1) | | | +--metagenomes (8) | | | +--marine metagenome (8) | +--Bacteria (272) | +--Proteobacteria (270) | | | +--Betaproteobacteria (270) | | | +--unclassifiedBetaproteobacteria (4) | | | | | +--beta proteobacterium AAP65 (1) | | | | | +--Kinetoplastibacterium (2) | | | | | | | +--Candidatus Kinetoplastibacterium galatii TCC219 (1) | | | | | | | +--Candidatus Kinetoplastibacterium desouzaii TCC079E (1) | | | | | +--Betaproteobacteria bacterium MOLA814 (1) | | | +--Burkholderiales bacterium JOSHI_001 (1) | | | +--Burkholderiales (263) | | | | | +--Thiomonas sp. S10 (1) | | | | | +--Alcaligenaceae (30) | | | | | | | +--Bordetella sp. AU3182 (1) | | | | | | | +--Bordetella genomosp. 9 (1) | | | | | | | +--Basilea (1) | | | | | | | | | +--Basilea psittacipulmonis DSM 24701 (1) | | | | | | | +--Bordetella ansorpii (1) | | | | | | | +--Bordetella pertussis Tohama I (1) | | | | | | | +--Achromobacter xylosoxidans A8 (1) | | | | | | | +--Candidimonas nitroreducens (1) | | | | | | | +--Bordetella hinzii (1) | | | | | | | +--Alcaligenes sp. EGD-AK7 (1) | | | | | | | +--Bordetella bronchiseptica (1) | | | | | | | +--Achromobacter xylosoxidans AXX-A (1) | | | | | | | +--Bordetella sp. SCN 67-23 (1) | | | | | | | +--Bordetella sp. AU7206 (1) | | | | | | | +--Bordetella sp. N (1) | | | | | | | +--Bordetella petrii (1) | | | | | | | +--Kerstersia gyiorum (1) | | | | | | | +--Bordetella sp. H567 (1) | | | | | | | +--Pelistega indica (1) | | | | | | | +--Castellaniella (1) | | | | | | | | | +--Castellaniella defragrans 65Phen (1) | | | | | | | +--Pusillimonas sp. T7-7 (1) | | | | | | | +--Bordetella sp. AU10664 (1) | | | | | | | +--Bordetella trematum (1) | | | | | | | +--Orrella dioscoreae (1) | | | | | | | +--Bordetella avium 197N (1) | | | | | | | +--Achromobacter piechaudii ATCC 43553 (1) | | | | | | | +--Achromobacter sp. DMS1 (1) | | | | | | | +--Paenalcaligenes hominis (1) | | | | | | | +--Bordetella genomosp. 8 (1) | | | | | | | +--Advenella (1) | | | | | | | | | +--Advenella mimigardefordensis DPN7 (1) | | | | | | | +--Achromobacter (1) | | | | | | | +--Achromobacter piechaudii HLE (1) | | | | | +--Oxalobacteraceae bacterium IMCC9480 (1) | | | | | +--Alcaligenaceae bacterium BZ59 (1) | | | | | +--Roseateles depolymerans (1) | | | | | +--Roseateles aquatilis (1) | | | | | +--Tepidimonas sp. AT-A2 (1) | | | | | +--Leptothrix cholodnii SP-6 (1) | | | | | +--unclassifiedBurkholderiales (28) | | | | | | | +--Burkholderiales bacterium GWF1_66_17 (1) | | | | | | | +--Burkholderiales bacterium 68-12 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_02_FULL_57_36 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_64_99 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_02_FULL_67_64 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_65_40 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_61_11 (1) | | | | | | | +--Burkholderiales bacterium 68-10 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_63_9 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPLOWO2_12_FULL_61_40 (1) | | | | | | | +--Burkholderiales bacterium RIFOXYD12_FULL_59_19 (1) | | | | | | | +--BurkholderialesGeneraincertaesedis (13) | | | | | | | | | +--Ideonella sakaiensis (1) | | | | | | | | | +--Mitsuaria sp. 7 (1) | | | | | | | | | +--Rubrivivax sp. SCN 71-131 (1) | | | | | | | | | +--Aquabacterium sp. NJ1 (1) | | | | | | | | | +--Xylophilus sp. Leaf220 (1) | | | | | | | | | +--Rhizobacter sp. Root1221 (1) | | | | | | | | | +--Rhizobacter sp. Root404 (1) | | | | | | | | | +--Rubrivivax (1) | | | | | | | | | | | +--Rubrivivax gelatinosus IL144 (1) | | | | | | | | | +--Sphaerotilus (1) | | | | | | | | | | | +--Sphaerotilusnatans (1) | | | | | | | | | | | +--Sphaerotilus natans subsp. natans DSM 6575 (1) | | | | | | | | | +--Rhizobacter sp. Root29 (1) | | | | | | | | | +--Rubrivivax sp. SCN 70-15 (1) | | | | | | | | | +--Methylibium sp. NZG (1) | | | | | | | | | +--Paucibacter sp. KCTC 42545 (1) | | | | | | | +--Burkholderiales bacterium RIFOXYC12_FULL_65_23 (1) | | | | | | | +--Burkholderiales bacterium 66-5 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20 (1) | | | | | | | +--Burkholderiales bacterium RIFCSPHIGHO2_01_FULL_63_240 (1) | | | | | +--Oxalobacteraceae (29) | | | | | | | +--Janthinobacterium sp. CG23_2 (1) | | | | | | | +--Massilia sp. Leaf139 (1) | | | | | | | +--Duganella sp. Leaf126 (1) | | | | | | | +--Herbaspirillum sp. HZ10 (1) | | | | | | | +--Massilia sp. KIM (1) | | | | | | | +--Massilia sp. JS1662 (1) | | | | | | | +--Janthinobacterium sp. KBS0711 (1) | | | | | | | +--Janthinobacterium sp. Marseille (2) | | | | | | | +--Herbaspirillum seropedicae SmR1 (1) | | | | | | | +--Janthinobacterium (1) | | | | | | | | | +--Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628 (1) | | | | | | | +--Herminiimonas arsenicoxydans (2) | | | | | | | +--Herbaspirillum sp. TSA66 (1) | | | | | | | +--Collimonas fungivorans Ter331 (1) | | | | | | | +--Duganella sp. Sac-22 (1) | | | | | | | +--Massilia sp. LC238 (1) | | | | | | | +--Herbaspirillum sp. YR522 (1) | | | | | | | +--Massilia (1) | | | | | | | | | +--Massilia timonae CCUG 45783 (1) | | | | | | | +--Noviherbaspirillum sp. Root189 (1) | | | | | | | +--Massilia sp. CF038 (1) | | | | | | | +--Janthinobacterium sp. HH01 (1) | | | | | | | +--Duganella sp. Root198D2 (1) | | | | | | | +--Massilia sp. NR 4-1 (1) | | | | | | | +--Herbaspirillum sp. CF444 (1) | | | | | | | +--Massilia sp. WF1 (1) | | | | | | | +--Collimonas arenae (1) | | | | | | | +--Massilia sp. Root351 (1) | | | | | | | +--Massilia sp. BSC265 (1) | | | | | +--Thiomonas intermedia K12 (1) | | | | | +--Advenella kashmirensis WT001 (1) | | | | | +--Burkholderiaceae (89) | | | | | | | +--Burkholderia xenovorans LB400 (2) | | | | | | | +--Burkholderia sp. ST111 (1) | | | | | | | +--Ralstonia sp. PBA (1) | | | | | | | +--Burkholderia fungorum (1) | | | | | | | +--Burkholderia glathei (1) | | | | | | | +--Paraburkholderia sp. SOS3 (1) | | | | | | | +--Burkholderia phenazinium (1) | | | | | | | +--Caballeronia peredens (1) | | | | | | | +--Candidatus Burkholderia crenata (1) | | | | | | | +--Burkholderia sp. SRS-W-2-2016 (1) | | | | | | | +--Ralstonia pickettii 12J (1) | | | | | | | +--Paraburkholderia piptadeniae (1) | | | | | | | +--Cupriavidus metallidurans CH34 (2) | | | | | | | +--Burkholderia caryophylli (1) | | | | | | | +--Cupriavidus sp. UYMMa02A (1) | | | | | | | +--Candidatus Burkholderia calva (1) | | | | | | | +--Burkholderia terricola (1) | | | | | | | +--Cupriavidus basilensis (1) | | | | | | | +--Burkholderia sp. SD3175 (1) | | | | | | | +--Cupriavidus sp. HPC(L) (1) | | | | | | | +--Pandoraea pnomenusa (1) | | | | | | | +--Burkholderia rhizoxinica HKI 454 (1) | | | | | | | +--Candidatus Burkholderia kirkii (1) | | | | | | | +--Burkholderia sp. BR2009044596 (1) | | | | | | | +--Burkholderia (12) | | | | | | | | | +--Burkholderia pseudomallei K96243 (1) | | | | | | | | | +--Burkholderia sp. TSV86 (1) | | | | | | | | | +--Burkholderia latens (1) | | | | | | | | | +--Burkholderia glumae PG1 (1) | | | | | | | | | +--Burkholderia pseudomallei 1106a (1) | | | | | | | | | +--Burkholderia multivorans ATCC 17616 (1) | | | | | | | | | +--Burkholderia vietnamiensis G4 (2) | | | | | | | | | +--Burkholderia cenocepacia J2315 (1) | | | | | | | | | +--Burkholderia cenocepacia HI2424 (1) | | | | | | | | | +--Burkholderia singularis (1) | | | | | | | | | +--Burkholderia sp. 383 (1) | | | | | | | +--Burkholderia sp. A9 (1) | | | | | | | +--Burkholderia sp. Bk (1) | | | | | | | +--Burkholderia sp. RPE64 (1) | | | | | | | +--Caballeronia (1) | | | | | | | | | +--Caballeronia glathei PML1(12) (1) | | | | | | | +--Cupriavidus sp. USMAA2-4 (1) | | | | | | | +--Burkholderia sp. lig30 (1) | | | | | | | +--Polynucleobacter sp. VK13 (1) | | | | | | | +--Polynucleobacter duraquae (1) | | | | | | | +--Candidatus Burkholderia verschuerenii (1) | | | | | | | +--Burkholderia sp. CCGE1003 (1) | | | | | | | +--Paraburkholderia ribeironis (1) | | | | | | | +--Candidatus Burkholderia kirkii UZHbot1 (1) | | | | | | | +--Cupriavidus necator (1) | | | | | | | +--Burkholderia sp. MR1 (1) | | | | | | | +--Burkholderia sp. LMG 22936 (1) | | | | | | | +--Burkholderia sp. TJI49 (1) | | | | | | | +--Burkholderia sp. BR2004143571 (1) | | | | | | | +--Burkholderia phymatum STM815 (2) | | | | | | | +--Cupriavidus sp. SK-3 (1) | | | | | | | +--Burkholderia gladioli BSR3 (1) | | | | | | | +--Candidatus Burkholderia schumannianae (1) | | | | | | | +--Burkholderia glumae BGR1 (2) | | | | | | | +--Polynucleobacter necessarius subsp. necessarius STIR1 (1) | | | | | | | +--Caballeronia calidae (1) | | | | | | | +--Burkholderia sp. ATSB16 (1) | | | | | | | +--Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 (2) | | | | | | | +--Burkholderia sp. LMG 22934 (1) | | | | | | | +--Ralstonia solanacearum GMI1000 (2) | | | | | | | +--Paraburkholderia susongensis (1) | | | | | | | +--Burkholderia sp. H160 (1) | | | | | | | +--Paraburkholderia ginsengiterrae (1) | | | | | | | +--Burkholderia sp. AD24 (1) | | | | | | | +--Ralstonia eutropha H16 (1) | | | | | | | +--Caballeronia udeis (1) | | | | | | | +--Burkholderia andropogonis (1) | | | | | | | +--Burkholderia sp. OLGA172 (1) | | | | | | | +--Burkholderia sacchari (1) | | | | | | | +--Polynucleobacter sphagniphilus (1) | | | | | | | +--Ralstonia pickettii 12D (1) | | | | | | | +--Burkholderia sp. LMG 22940 (1) | | | | | | | +--Burkholderia sp. Leaf177 (1) | | | | | | | +--Ralstonia eutropha JMP134 (2) | | | | | | | +--Burkholderia caribensis (1) | | | | | | | +--Burkholderia tropica (1) | | | | | | | +--Ralstonia solanacearum IPO1609 (1) | | | | | | | +--Burkholderia ubonensis (1) | | | | | +--Methylibium petroleiphilum PM1 (2) | | | | | +--Methylibium sp. NS21 (1) | | | | | +--Comamonadaceae (75) | | | | | +--Limnohabitans sp. 103DPR2 (1) | | | | | +--Ramlibacter tataouinensis TTB310 (1) | | | | | +--Acidovorax delafieldii 2AN (1) | | | | | +--Acidovorax sp. Leaf160 (1) | | | | | +--Comamonadaceae bacterium CG2_30_59_20 (1) | | | | | +--Pseudacidovorax intermedius (1) | | | | | +--Variovorax paradoxus (1) | | | | | +--Acidovorax sp. CF316 (1) | | | | | +--Acidovorax sp. NO-1 (1) | | | | | +--Comamonadaceae bacterium CG1_02_60_18 (1) | | | | | +--Variovorax sp. Root473 (1) | | | | | +--Acidovorax sp. MR-S7 (1) | | | | | +--Curvibacter sp. GWA2_64_110 (1) | | | | | +--Pelomonas sp. Root1444 (1) | | | | | +--Verminephrobacter eiseniae EF01-2 (2) | | | | | +--Rhodoferax saidenbachensis (1) | | | | | +--Acidovorax sp. KKS102 (1) | | | | | +--Variovorax sp. HW608 (1) | | | | | +--Comamonadaceae bacterium CG2_30_60_41 (1) | | | | | +--Albidiferax ferrireducens (1) | | | | | +--Hydrogenophaga sp. PBC (1) | | | | | +--Variovorax sp. WDL1 (1) | | | | | +--Comamonas testosteroni KF-1 (1) | | | | | +--Ramlibacter sp. Leaf400 (1) | | | | | +--Hydrogenophaga sp. H7 (1) | | | | | +--Acidovorax sp. 65-7 (1) | | | | | +--Rhodoferax koreense (1) | | | | | +--Rhodoferax fermentans (1) | | | | | +--Variovorax sp. PAMC 28711 (1) | | | | | +--Hydrogenophaga sp. A37 (1) | | | | | +--Comamonadaceae bacterium A1 (1) | | | | | +--Acidovorax sp. Leaf78 (1) | | | | | +--Comamonadaceae bacterium CG2_30_57_122 (1) | | | | | +--Ottowia sp. oral taxon 894 (1) | | | | | +--Rhodoferax (1) | | | | | | | +--Rhodoferax antarcticus ANT.BR (1) | | | | | +--Lampropedia (1) | | | | | | | +--Lampropedia hyalina DSM 16112 (1) | | | | | +--Acidovorax sp. SCN 68-22 (1) | | | | | +--Limnohabitans (1) | | | | | | | +--Limnohabitans planktonicus II-D5 (1) | | | | | +--Delftia acidovorans SPH-1 (2) | | | | | +--Variovorax sp. JS1663 (1) | | | | | +--Acidovorax sp. RAC01 (1) | | | | | +--Hydrogenophaga sp. T4 (1) | | | | | +--Rhodoferax ferrireducens T118 (2) | | | | | +--Polaromonas sp. CG9_12 (1) | | | | | +--Comamonadaceae bacterium SCN 68-20 (1) | | | | | +--Acidovorax citrulli AAC00-1 (2) | | | | | +--Hydrogenophaga crassostreae (1) | | | | | +--Pseudorhodoferax sp. Leaf267 (1) | | | | | +--Comamonas sp. SCN 67-35 (1) | | | | | +--Comamonas (1) | | | | | | | +--Comamonas aquatica DA1877 (1) | | | | | +--Acidovorax sp. NA3 (1) | | | | | +--Polaromonas sp. CF318 (1) | | | | | +--Comamonas testosteroni CNB-2 (1) | | | | | +--Lampropedia cohaerens (1) | | | | | +--Hylemonella gracilis ATCC 19624 (1) | | | | | +--Ramlibacter tataouinensis (1) | | | | | +--Polaromonas naphthalenivorans CJ2 (2) | | | | | +--Acidovorax sp. 12322-1 (1) | | | | | +--Acidovorax temperans (1) | | | | | +--Pseudorhodoferax sp. Leaf274 (1) | | | | | +--Curvibacter sp. PAE-UM (1) | | | | | +--Polaromonas sp. JS666 (2) | | | | | +--Hydrogenophaga sp. Root209 (1) | | | | | +--Hydrogenophaga sp. IBVHS1 (1) | | | | | +--Acidovorax sp. JS42 (2) | | | | | +--Limnohabitans sp. 63ED37-2 (1) | | | | | +--Alicycliphilus denitrificans K601 (1) | | | | | +--Curvibacter sp. GWA2_63_95 (1) | | | +--Neisseriales (1) | | | | | +--Neisseriaceae (1) | | | | | +--Vitreoscilla filiformis (1) | | | +--[Polyangium] brachysporum (1) | +--Terrabacteriagroup (2) | +--Actinobacteria (2) | +--Actinobacteria (2) | +--Propionibacteriales (2) | +--Nocardioidaceae (2) | +--Mumia flava (2)