# Species tree for RF01731 # Generated from Rfam version 14.10 | +--Eukaryota (12) | | | +--stramenopiles (1) | | | | | +--PXclade (1) | | | | | +--Phaeophyceae (1) | | | | | +--Ectocarpales (1) | | | | | +--Ectocarpaceae (1) | | | | | +--Ectocarpus siliculosus (1) | | | +--Metazoa (4) | | | | | +--Chordata (1) | | | | | | | +--Craniata (1) | | | | | | | +--Vertebrata (1) | | | | | | | +--Euteleostomi (1) | | | | | | | +--Mammalia (1) | | | | | | | +--Eutheria (1) | | | | | | | +--Euarchontoglires (1) | | | | | | | +--Primates (1) | | | | | | | +--Haplorrhini (1) | | | | | | | +--Catarrhini (1) | | | | | | | +--Cercopithecidae (1) | | | | | | | +--Cercopithecinae (1) | | | | | | | +--Chlorocebus sabaeus (1) | | | | | +--Arthropoda (1) | | | | | | | +--Hexapoda (1) | | | | | | | +--Insecta (1) | | | | | | | +--Pterygota (1) | | | | | | | +--Neoptera (1) | | | | | | | +--Paraneoptera (1) | | | | | | | +--Hemiptera (1) | | | | | | | +--Sternorrhyncha (1) | | | | | | | +--Aphidiformes (1) | | | | | | | +--Aphidoidea (1) | | | | | | | +--Aphididae (1) | | | | | | | +--Macrosiphini (1) | | | | | | | +--Acyrthosiphon pisum (pea aphid) (1) | | | | | +--Platyhelminthes (2) | | | | | +--Trematoda (2) | | | | | +--Digenea (2) | | | | | +--Strigeidida (2) | | | | | +--Schistosomatoidea (2) | | | | | +--Schistosomatidae (2) | | | | | +--Schistosoma mansoni (2) | | | +--Viridiplantae (7) | | | +--Streptophyta (7) | | | +--Embryophyta (7) | | | +--Tracheophyta (7) | | | +--Spermatophyta (7) | | | +--Magnoliophyta (6) | | | | | +--Liliopsida (1) | | | | | | | +--Poales (1) | | | | | | | +--Poaceae (1) | | | | | | | +--BEPclade (1) | | | | | | | +--Pooideae (1) | | | | | | | +--Triticeae (1) | | | | | | | +--Triticum aestivum (bread wheat) (1) | | | | | +--eudicotyledons (5) | | | | | +--coreeudicotyledons (5) | | | | | +--Caryophyllales (3) | | | | | | | +--Amaranthaceae (3) | | | | | | | +--Spinacia oleracea (spinach) (3) | | | | | +--rosids (2) | | | | | +--fabids (1) | | | | | | | +--Fabales (1) | | | | | | | +--Fabaceae (1) | | | | | | | +--Papilionoideae (1) | | | | | | | +--Phaseoleae (1) | | | | | | | +--Vigna angularis (adzuki bean) (1) | | | | | +--malvids (1) | | | | | +--Myrtales (1) | | | | | +--Myrtaceae (1) | | | | | +--Eucalyptus grandis (1) | | | +--Coniferopsida (1) | | | +--Coniferales (1) | | | +--Pinaceae (1) | | | +--Picea glauca (white spruce) (1) | +--Bacteria (1528) | | | +--Thermotogae (4) | | | | | +--Thermotogae (4) | | | | | +--Petrotogales (4) | | | | | +--Petrotogaceae (4) | | | | | +--Marinitoga (4) | | | | | +--Marinitoga piezophila KA3 (4) | | | +--Proteobacteria (703) | | | | | +--Alphaproteobacteria (1) | | | | | | | +--Rhodobacterales (1) | | | | | | | +--Rhodobacteraceae (1) | | | | | | | +--Rhodobacteraceae bacterium PD-2 (1) | | | | | +--Gammaproteobacteria (700) | | | | | | | +--unclassifiedGammaproteobacteria (8) | | | | | | | | | +--Gammaproteobacteria bacterium RBG_16_51_14 (4) | | | | | | | | | +--Gammaproteobacteria bacterium SCGC AG-212-F23 (4) | | | | | | | +--Enterobacterales (71) | | | | | | | | | +--Enterobacteriaceae (4) | | | | | | | | | | | +--Kluyvera (3) | | | | | | | | | | | | | +--Kluyvera ascorbata ATCC 33433 (3) | | | | | | | | | | | +--Atlantibacter (1) | | | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (1) | | | | | | | | | +--Erwiniaceae (57) | | | | | | | | | | | +--Pantoea latae (29) | | | | | | | | | | | +--Tatumella (8) | | | | | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (8) | | | | | | | | | | | +--Erwinia gerundensis (20) | | | | | | | | | +--Hafniaceae (10) | | | | | | | | | +--Hafnia (10) | | | | | | | | | +--Hafnia alvei FB1 (10) | | | | | | | +--Aeromonadales (17) | | | | | | | | | +--Aeromonadaceae (17) | | | | | | | | | +--Aeromonas (6) | | | | | | | | | | | +--Aeromonas diversa CDC 2478-85 (6) | | | | | | | | | +--Aeromonas schubertii (10) | | | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (1) | | | | | | | +--Orbales (7) | | | | | | | | | +--Orbaceae (7) | | | | | | | | | +--Gilliamella bombicola (7) | | | | | | | +--Nevskiales (6) | | | | | | | | | +--Sinobacteraceae (6) | | | | | | | | | +--Hydrocarboniphaga (6) | | | | | | | | | +--Hydrocarboniphaga effusa AP103 (6) | | | | | | | +--Alteromonadales (90) | | | | | | | | | +--Colwelliaceae (1) | | | | | | | | | | | +--Colwellia sp. PAMC 21821 (1) | | | | | | | | | +--Pseudoalteromonadaceae (47) | | | | | | | | | | | +--Pseudoalteromonas ulvae (11) | | | | | | | | | | | +--Pseudoalteromonas atlantica T6c (3) | | | | | | | | | | | +--Pseudoalteromonas porphyrae (1) | | | | | | | | | | | +--Pseudoalteromonas sp. A601 (4) | | | | | | | | | | | +--Pseudoalteromonas haloplanktis TAC125 (2) | | | | | | | | | | | +--Pseudoalteromonas fuliginea (1) | | | | | | | | | | | +--Pseudoalteromonas tunicata D2 (3) | | | | | | | | | | | +--Pseudoalteromonas piscicida (7) | | | | | | | | | | | +--Pseudoalteromonas (9) | | | | | | | | | | | | | +--Pseudoalteromonas luteoviolacea B = ATCC 29581 (1) | | | | | | | | | | | | | +--Pseudoalteromonas marina DSM 17587 (3) | | | | | | | | | | | | | +--Pseudoalteromonas luteoviolacea S4054 (2) | | | | | | | | | | | | | +--Pseudoalteromonas lipolytica SCSIO 04301 (3) | | | | | | | | | | | +--Pseudoalteromonas phenolica (4) | | | | | | | | | | | +--Pseudoalteromonas sp. P1-25 (2) | | | | | | | | | +--Shewanellaceae (10) | | | | | | | | | | | +--Shewanella sp. P1-14-1 (4) | | | | | | | | | | | +--Shewanella loihica PV-4 (1) | | | | | | | | | | | +--Shewanella denitrificans OS217 (3) | | | | | | | | | | | +--Shewanella amazonensis SB2B (2) | | | | | | | | | +--Psychromonadaceae (18) | | | | | | | | | | | +--Psychromonas ingrahamii 37 (18) | | | | | | | | | +--Alteromonadaceae (14) | | | | | | | | | +--Glaciecola nitratireducens FR1064 (2) | | | | | | | | | +--Marinobacter sp. D15-8W (1) | | | | | | | | | +--Marinobacter salinus (1) | | | | | | | | | +--Paraglaciecola sp. S66 (10) | | | | | | | +--Alteromonadales bacterium TW-7 (1) | | | | | | | +--Vibrionales (24) | | | | | | | | | +--Vibrionaceae (24) | | | | | | | | | +--Vibrio sp. MEBiC08052 (3) | | | | | | | | | +--Vibrio mangrovi (5) | | | | | | | | | +--Vibrio (16) | | | | | | | | | +--Vibrio rumoiensis 1S-45 (2) | | | | | | | | | +--Vibrio aerogenes CECT 7868 (14) | | | | | | | +--Cellvibrionales (2) | | | | | | | | | +--Halieaceae (2) | | | | | | | | | +--Halioglobus sp. HI00S01 (1) | | | | | | | | | +--Pseudohaliea (1) | | | | | | | | | +--Pseudohaliea rubra DSM 19751 (1) | | | | | | | +--Xanthomonadales (8) | | | | | | | | | +--Sinobacteraceae (2) | | | | | | | | | | | +--Hydrocarboniphaga daqingensis (2) | | | | | | | | | +--Xanthomonadaceae (6) | | | | | | | | | +--Lysobacter (6) | | | | | | | | | +--Lysobacter capsici AZ78 (6) | | | | | | | +--Enterobacteriales (43) | | | | | | | | | +--Enterobacteriaceae (43) | | | | | | | | | +--Pantoea sp. At-9b (4) | | | | | | | | | +--Erwinia tasmaniensis (1) | | | | | | | | | +--Pantoea ananatis LMG 20103 (10) | | | | | | | | | +--Enterobacter gergoviae (3) | | | | | | | | | +--Pantoea stewartii subsp. stewartii DC283 (6) | | | | | | | | | +--Raoultella planticola (1) | | | | | | | | | +--Escherichia blattae DSM 4481 (8) | | | | | | | | | +--Pantoea vagans C9-1 (6) | | | | | | | | | +--Pantoea wallisii (3) | | | | | | | | | +--Pantoea dispersa (1) | | | | | | | +--Chromatiales (12) | | | | | | | | | +--Ectothiorhodospiraceae (2) | | | | | | | | | | | +--Oceanococcus atlanticus (2) | | | | | | | | | +--Halothiobacillaceae (10) | | | | | | | | | +--Halothiobacillus sp. XI15 (10) | | | | | | | +--Oceanospirillales (20) | | | | | | | | | +--Oceanospirillaceae (6) | | | | | | | | | | | +--Osedax symbiont Rs1 (2) | | | | | | | | | | | +--Thalassolituus (1) | | | | | | | | | | | | | +--Thalassolituus oleivorans MIL-1 (1) | | | | | | | | | | | +--Oceanobacter sp. HI0075 (3) | | | | | | | | | +--Alcanivoracaceae (14) | | | | | | | | | +--Kangiella sp. YCS-5 (2) | | | | | | | | | +--Kangiella koreensis DSM 16069 (12) | | | | | | | +--Pseudomonadales (391) | | | | | | | +--unclassifiedPseudomonadales (2) | | | | | | | | | +--Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 (2) | | | | | | | +--Pseudomonadaceae (388) | | | | | | | | | +--Pseudomonas lutea (8) | | | | | | | | | +--Pseudomonas sp. Chol1 (2) | | | | | | | | | +--Pseudomonas sp. HUK17 (1) | | | | | | | | | +--Pseudomonas fulva 12-X (1) | | | | | | | | | +--Pseudomonas fluorescens Pf-5 (9) | | | | | | | | | +--Pseudomonas brenneri (23) | | | | | | | | | +--Pseudomonas syringae (15) | | | | | | | | | +--Pseudomonas sp. GM78 (3) | | | | | | | | | +--Pseudomonas sp. 1 R 17 (23) | | | | | | | | | +--Pseudomonas sp. StFLB209 (3) | | | | | | | | | +--Pseudomonas sp. UW4 (3) | | | | | | | | | +--Pseudomonas putida KT2440 (5) | | | | | | | | | +--Pseudomonas chlororaphis subsp. aureofaciens 30-84 (7) | | | | | | | | | +--Azotobacter vinelandii DJ (8) | | | | | | | | | +--Pseudomonas sp. ABAC61 (5) | | | | | | | | | +--Pseudomonas sp. VI4.1 (1) | | | | | | | | | +--Pseudomonas sp. TTU2014-080ASC (3) | | | | | | | | | +--Pseudomonas fluorescens SBW25 (40) | | | | | | | | | +--Pseudomonas entomophila L48 (2) | | | | | | | | | +--Pseudomonas stutzeri (3) | | | | | | | | | +--Pseudomonas sp. MF4836 (4) | | | | | | | | | +--Pseudomonas stutzeri A1501 (3) | | | | | | | | | +--Pseudomonas sp. BZ93 (1) | | | | | | | | | +--Pseudomonas fuscovaginae (3) | | | | | | | | | +--Pseudomonas sp. FeS53a (9) | | | | | | | | | +--Pseudomonas syringae pv. tomato str. DC3000 (9) | | | | | | | | | +--Pseudomonas hussainii (2) | | | | | | | | | +--Pseudomonas floridensis (3) | | | | | | | | | +--Pseudomonas sp. 21C1 (8) | | | | | | | | | +--Pseudomonas (155) | | | | | | | | | | | +--Pseudomonassyringaegroup (1) | | | | | | | | | | | | | +--Pseudomonassyringaegroupgenomosp.1 (1) | | | | | | | | | | | | | +--Pseudomonassyringae (1) | | | | | | | | | | | | | +--Pseudomonassyringaegrouppathovarsincertaesedis (1) | | | | | | | | | | | | | +--Pseudomonas syringae pv. actinidiae ICMP 19096 (1) | | | | | | | | | | | +--Pseudomonasstutzerigroup (1) | | | | | | | | | | | | | +--Pseudomonas balearica DSM 6083 (1) | | | | | | | | | | | +--Pseudomonasfluorescensgroup (75) | | | | | | | | | | | | | +--Pseudomonas fluorescens F113 (70) | | | | | | | | | | | | | +--Pseudomonas fluorescens ABAC62 (5) | | | | | | | | | | | +--Pseudomonas syringae pv. japonica str. M301072PT (2) | | | | | | | | | | | +--Pseudomonasaeruginosagroup (52) | | | | | | | | | | | | | +--Pseudomonasoleovorans/pseudoalcaligenesgroup (1) | | | | | | | | | | | | | | | +--Pseudomonas pseudoalcaligenes KF707 = NBRC 110670 (1) | | | | | | | | | | | | | +--Pseudomonas alcaligenes NBRC 14159 (2) | | | | | | | | | | | | | +--Pseudomonas resinovorans NBRC 106553 (49) | | | | | | | | | | | +--Pseudomonas syringae pv. spinaceae (4) | | | | | | | | | | | +--Pseudomonasputidagroup (8) | | | | | | | | | | | | | +--Pseudomonas putida S11 (8) | | | | | | | | | | | +--Pseudomonas caspiana (3) | | | | | | | | | | | +--Pseudomonaspertucinogenagroup (5) | | | | | | | | | | | | | +--Pseudomonas denitrificans ATCC 13867 (5) | | | | | | | | | | | +--Pseudomonas sp. Lz4W (4) | | | | | | | | | +--Pseudomonas sp. Bc-h (26) | | | | | | | +--Oceanicoccus sagamiensis (1) | | | | | +--delta/epsilonsubdivisions (2) | | | | | +--Deltaproteobacteria (2) | | | | | +--Desulfobacterales (2) | | | | | +--Desulfobulbaceae (2) | | | | | +--Desulfofustis (2) | | | | | +--Desulfofustis glycolicus DSM 9705 (2) | | | +--Terrabacteriagroup (465) | | | | | +--Firmicutes (465) | | | | | +--Clostridia (401) | | | | | | | +--Thermoanaerobacterales (3) | | | | | | | | | +--Thermoanaerobacteraceae (3) | | | | | | | | | +--Thermacetogenium (3) | | | | | | | | | +--Thermacetogenium phaeum DSM 12270 (3) | | | | | | | +--unclassifiedClostridia (9) | | | | | | | | | +--Clostridia bacterium 41_269 (5) | | | | | | | | | +--Clostridia bacterium BRH_c25 (4) | | | | | | | +--Clostridiales (389) | | | | | | | +--Ruminococcaceae (3) | | | | | | | | | +--Ruminiclostridium (3) | | | | | | | | | +--[Clostridium] termitidis CT1112 (3) | | | | | | | +--Lachnospiraceae (124) | | | | | | | | | +--Lachnospiraceae bacterium 10-1 (2) | | | | | | | | | +--Roseburia sp. 831b (22) | | | | | | | | | +--Pseudobutyrivibrio (6) | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (6) | | | | | | | | | +--Roseburia (52) | | | | | | | | | | | +--Roseburia sp. CAG:45 (49) | | | | | | | | | | | +--Roseburia sp. CAG:197 (1) | | | | | | | | | | | +--Roseburia sp. CAG:18 (2) | | | | | | | | | +--Anaerosporobacter (28) | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (28) | | | | | | | | | +--Roseburia sp. 40_7 (14) | | | | | | | +--Peptococcaceae (173) | | | | | | | | | +--Desulfosporosinus (3) | | | | | | | | | | | +--Desulfosporosinus lacus DSM 15449 (3) | | | | | | | | | +--Desulfotomaculum (58) | | | | | | | | | | | +--Desulfotomaculum putei DSM 12395 (1) | | | | | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (55) | | | | | | | | | | | +--Desulfotomaculum aeronauticum DSM 10349 (2) | | | | | | | | | +--Desulfosporosinus sp. I2 (3) | | | | | | | | | +--Desulfosporosinus sp. OL (2) | | | | | | | | | +--Desulfosporosinus sp. BRH_c37 (3) | | | | | | | | | +--Desulfotomaculum ferrireducens (4) | | | | | | | | | +--Peptococcaceae bacterium BRH_c4a (99) | | | | | | | | | +--Peptococcaceae bacterium BRH_c23 (1) | | | | | | | +--unclassifiedClostridiales (19) | | | | | | | | | +--Clostridiales bacterium 41_12_two_minus (11) | | | | | | | | | +--Clostridiales bacterium 44_9 (8) | | | | | | | +--Gracilibacteraceae (1) | | | | | | | | | +--Gracilibacter sp. BRH_c7a (1) | | | | | | | +--Clostridiaceae (40) | | | | | | | | | +--Clostridium (38) | | | | | | | | | | | +--Clostridium acetireducens DSM 10703 (7) | | | | | | | | | | | +--Clostridium sp. CAG:127 (31) | | | | | | | | | +--Fervidicella (1) | | | | | | | | | | | +--Fervidicella metallireducens AeB (1) | | | | | | | | | +--Clostridium tepidum (1) | | | | | | | +--Eubacteriaceae (29) | | | | | | | +--Eubacterium (29) | | | | | | | +--Eubacterium sp. CAG:76 (6) | | | | | | | +--Eubacterium sp. CAG:252 (23) | | | | | +--Firmicutes bacterium CAG:534 (1) | | | | | +--Firmicutes bacterium CAG:882 (52) | | | | | +--Firmicutes bacterium CAG:65 (2) | | | | | +--Firmicutes bacterium CAG:194 (4) | | | | | +--Firmicutes bacterium CAG:95 (5) | | | +--Nitrospirae (1) | | | | | +--Nitrospira (1) | | | | | +--Nitrospirales (1) | | | | | +--Nitrospiraceae (1) | | | | | +--Candidatus Magnetoovum chiemensis (1) | | | +--Synergistetes (102) | | | | | +--Synergistia (102) | | | | | +--Synergistales (102) | | | | | +--Synergistaceae (102) | | | | | +--Dethiosulfovibrio sp. USBA 82 (88) | | | | | +--Dethiosulfovibrio peptidovorans DSM 11002 (14) | | | +--Firmicutes (253) | | | +--Clostridia (253) | | | +--Thermoanaerobacterales (16) | | | | | +--ThermoanaerobacteralesFamilyIV.IncertaeSedis (16) | | | | | +--Mahella australiensis 50-1 BON (16) | | | +--Clostridiales (237) | | | +--Ruminococcaceae (18) | | | | | +--Acetivibrio ethanolgignens (18) | | | +--Lachnospiraceae (41) | | | | | +--Roseburia intestinalis L1-82 (13) | | | | | +--Roseburia intestinalis XB6B4 (19) | | | | | +--Pseudobutyrivibrio ruminis (8) | | | | | +--Butyrivibrio fibrisolvens 16/4 (1) | | | +--Peptococcaceae (33) | | | | | +--Desulfosporosinus meridiei DSM 13257 (1) | | | | | +--Thermincola potens JR (14) | | | | | +--Desulfotomaculum carboxydivorans CO-1-SRB (2) | | | | | +--Pelotomaculum thermopropionicum (1) | | | | | +--Pelotomaculum thermopropionicum SI (14) | | | | | +--Desulfosporosinus sp. OT (1) | | | +--Lachnospiraceae bacterium A2 (1) | | | +--Clostridiaceae (28) | | | | | +--Caloramator australicus RC3 (21) | | | | | +--Clostridium estertheticum subsp. estertheticum (1) | | | | | +--Clostridium hungatei (3) | | | | | +--Clostridium botulinum A str. ATCC 3502 (3) | | | +--Lachnospiraceae bacterium 28-4 (64) | | | +--Eubacteriaceae (52) | | | +--Eubacterium rectale ATCC 33656 (49) | | | +--Eubacterium eligens ATCC 27750 (3) | +--unclassified sequences (170)