# Species tree for RF01859 # Generated from Rfam version 14.10 | +--unclassifiedsequences (2) | | | +--metagenomes (2) | | | +--human gut metagenome (1) | | | +--marine metagenome (1) | +--Eukaryota (24) | | | +--Alveolata (2) | | | | | +--Apicomplexa (2) | | | | | +--Coccidia (2) | | | | | +--Eucoccidiorida (2) | | | | | +--Eimeriorina (2) | | | | | +--Sarcocystidae (2) | | | | | +--Hammondia hammondi (2) | | | +--Metazoa (15) | | | | | +--Nematoda (1) | | | | | | | +--Enoplea (1) | | | | | | | +--Trichocephalida (1) | | | | | | | +--Trichuridae (1) | | | | | | | +--Trichuris trichiura (1) | | | | | +--Chordata (4) | | | | | | | +--Craniata (4) | | | | | | | +--Vertebrata (4) | | | | | | | +--Euteleostomi (4) | | | | | | | +--Mammalia (3) | | | | | | | | | +--Eutheria (3) | | | | | | | | | +--Euarchontoglires (3) | | | | | | | | | +--Primates (3) | | | | | | | | | +--Haplorrhini (3) | | | | | | | | | +--Catarrhini (3) | | | | | | | | | +--Hominidae (1) | | | | | | | | | | | +--Gorilla gorilla gorilla (western lowland gorilla) (1) | | | | | | | | | +--Cercopithecidae (2) | | | | | | | | | +--Cercopithecinae (2) | | | | | | | | | +--Chlorocebus sabaeus (2) | | | | | | | +--Archosauria (1) | | | | | | | +--Dinosauria (1) | | | | | | | +--Saurischia (1) | | | | | | | +--Theropoda (1) | | | | | | | +--Coelurosauria (1) | | | | | | | +--Aves (1) | | | | | | | +--Neognathae (1) | | | | | | | +--Sphenisciformes (1) | | | | | | | +--Spheniscidae (1) | | | | | | | +--Aptenodytes forsteri (emperor penguin) (1) | | | | | +--Arthropoda (10) | | | | | +--Hexapoda (10) | | | | | +--Insecta (10) | | | | | +--Pterygota (10) | | | | | +--Neoptera (10) | | | | | +--Endopterygota (8) | | | | | | | +--Coleoptera (2) | | | | | | | | | +--Polyphaga (2) | | | | | | | | | +--Cucujiformia (2) | | | | | | | | | +--Curculionidae (2) | | | | | | | | | +--Scolytinae (2) | | | | | | | | | +--Dendroctonus ponderosae (mountain pine beetle) (2) | | | | | | | +--Diptera (6) | | | | | | | +--Brachycera (6) | | | | | | | +--Muscomorpha (6) | | | | | | | +--Muscoidea (1) | | | | | | | | | +--Muscidae (1) | | | | | | | | | +--Stomoxys calcitrans (stable fly) (1) | | | | | | | +--Hippoboscoidea (2) | | | | | | | | | +--Glossinidae (2) | | | | | | | | | +--Glossina palpalis gambiensis (2) | | | | | | | +--Oestroidea (2) | | | | | | | | | +--Calliphoridae (2) | | | | | | | | | +--Luciliinae (2) | | | | | | | | | +--Lucilia cuprina (2) | | | | | | | +--Ephydroidea (1) | | | | | | | +--Drosophilidae (1) | | | | | | | +--Drosophila (1) | | | | | | | +--Drosophila simulans (1) | | | | | +--Paraneoptera (2) | | | | | +--Hemiptera (2) | | | | | +--Sternorrhyncha (2) | | | | | +--Psylliformes (2) | | | | | +--Psylloidea (2) | | | | | +--Psyllidae (2) | | | | | +--Diaphorina citri (Asian citrus psyllid) (2) | | | +--Viridiplantae (5) | | | | | +--Streptophyta (5) | | | | | +--Embryophyta (5) | | | | | +--Tracheophyta (5) | | | | | +--Spermatophyta (5) | | | | | +--Magnoliophyta (5) | | | | | +--Liliopsida (5) | | | | | +--Poales (5) | | | | | +--Poaceae (5) | | | | | +--BEPclade (5) | | | | | +--Pooideae (5) | | | | | +--Triticeae (5) | | | | | +--Triticum urartu (5) | | | +--Opisthokonta (2) | | | +--Fungi (2) | | | +--Dikarya (2) | | | +--Ascomycota (2) | | | +--saccharomyceta (2) | | | +--Pezizomycotina (2) | | | +--leotiomyceta (2) | | | +--sordariomyceta (2) | | | +--Sordariomycetes (2) | | | +--Hypocreomycetidae (2) | | | +--Hypocreales (2) | | | +--Cordycipitaceae (2) | | | +--Beauveria (2) | | | +--Beauveria bassiana D1-5 (2) | +--Bacteria (339) | | | +--unclassifiedBacteria (3) | | | | | +--bacteria symbiont BFo2 of Frankliniella occidentalis (1) | | | | | +--bacteria symbiont BFo1 of Frankliniella occidentalis (2) | | | +--Proteobacteria (335) | | | | | +--Gammaproteobacteria (335) | | | | | +--Alteromonadales (28) | | | | | | | +--Pseudoalteromonadaceae (3) | | | | | | | | | +--Pseudoalteromonas ulvae (1) | | | | | | | | | +--Pseudoalteromonas tunicata D2 (2) | | | | | | | +--Colwelliaceae (1) | | | | | | | | | +--Thalassomonas actiniarum (1) | | | | | | | +--Shewanellaceae (23) | | | | | | | | | +--Shewanella oneidensis MR-1 (2) | | | | | | | | | +--Shewanella sp. P1-14-1 (1) | | | | | | | | | +--Shewanella violacea DSS12 (1) | | | | | | | | | +--Shewanella amazonensis SB2B (2) | | | | | | | | | +--Shewanella frigidimarina NCIMB 400 (2) | | | | | | | | | +--Shewanella woodyi ATCC 51908 (2) | | | | | | | | | +--Shewanella putrefaciens CN-32 (1) | | | | | | | | | +--Shewanella halifaxensis HAW-EB4 (1) | | | | | | | | | +--Shewanella sediminis HAW-EB3 (1) | | | | | | | | | +--Shewanella loihica PV-4 (2) | | | | | | | | | +--Shewanella algae (1) | | | | | | | | | +--Shewanella putrefaciens 200 (1) | | | | | | | | | +--Shewanella pealeana ATCC 700345 (2) | | | | | | | | | +--Shewanella baltica OS195 (1) | | | | | | | | | +--Shewanella mangrovi (1) | | | | | | | | | +--Shewanella baltica OS223 (1) | | | | | | | | | +--Shewanella piezotolerans WP3 (1) | | | | | | | +--Alteromonadaceae (1) | | | | | | | +--Agarivorans (1) | | | | | | | +--Agarivorans albus MKT 106 (1) | | | | | +--Vibrionales (51) | | | | | | | +--Vibrionaceae (50) | | | | | | | | | +--Vibrio mytili (1) | | | | | | | | | +--Vibrio sp. R-40493 (1) | | | | | | | | | +--Vibrio vulnificus YJ016 (2) | | | | | | | | | +--Vibrio alginolyticus 12G01 (1) | | | | | | | | | +--Vibrio metschnikovii CIP 69.14 (1) | | | | | | | | | +--Photobacterium aquae (1) | | | | | | | | | +--Vibrio tubiashii ATCC 19109 (1) | | | | | | | | | +--Vibrio coralliilyticus (1) | | | | | | | | | +--Vibrio cholerae O1 biovar El Tor str. N16961 (1) | | | | | | | | | +--Vibrio panuliri (1) | | | | | | | | | +--Photobacterium proteolyticum (1) | | | | | | | | | +--Vibrio sp. N418 (1) | | | | | | | | | +--Vibrio sp. F10 (1) | | | | | | | | | +--Vibrio sp. Ex25 (1) | | | | | | | | | +--Photobacterium halotolerans (1) | | | | | | | | | +--Vibrio cholerae MZO-2 (1) | | | | | | | | | +--Vibrio harveyi ATCC BAA-1116 (2) | | | | | | | | | +--Vibrio parahaemolyticus AQ4037 (1) | | | | | | | | | +--Photobacterium sp. CECT 7614 (1) | | | | | | | | | +--Vibrio sp. AND4 (1) | | | | | | | | | +--Vibrio (5) | | | | | | | | | | | +--Vibrio cincinnatiensis DSM 19608 (1) | | | | | | | | | | | +--Vibrio rumoiensis 1S-45 (1) | | | | | | | | | | | +--Vibrioharveyigroup (1) | | | | | | | | | | | | | +--Vibrio azureus NBRC 104587 (1) | | | | | | | | | | | +--Vibrio genomosp. F6 str. FF-238 (1) | | | | | | | | | | | +--Vibrio proteolyticus NBRC 13287 (1) | | | | | | | | | +--Vibrio anguillarum 775 (1) | | | | | | | | | +--Vibrio palustris (1) | | | | | | | | | +--Photobacterium jeanii (1) | | | | | | | | | +--Vibrio cidicii (1) | | | | | | | | | +--Photobacterium profundum 3TCK (1) | | | | | | | | | +--Vibrio shilonii (1) | | | | | | | | | +--Vibrio furnissii NCTC 11218 (1) | | | | | | | | | +--Vibrio sp. EJY3 (1) | | | | | | | | | +--Photobacterium sp. Gung47 (1) | | | | | | | | | +--Vibrio parahaemolyticus 16 (1) | | | | | | | | | +--Photobacterium galatheae (1) | | | | | | | | | +--Vibrio splendidus LGP32 (1) | | | | | | | | | +--Vibrio nigripulchritudo (1) | | | | | | | | | +--Vibrio variabilis (1) | | | | | | | | | +--Vibrio nereis (1) | | | | | | | | | +--Photobacterium ganghwense (1) | | | | | | | | | +--Vibrio sinaloensis (1) | | | | | | | | | +--Vibrio ponticus (1) | | | | | | | | | +--Vibrio hepatarius (1) | | | | | | | | | +--Vibrio shilonii AK1 (2) | | | | | | | | | +--Vibrio parahaemolyticus RIMD 2210633 (1) | | | | | | | | | +--Photobacterium marinum (1) | | | | | | | +--Vibrionales bacterium SWAT-3 (1) | | | | | +--Enterobacterales (91) | | | | | | | +--Yersiniaceae (12) | | | | | | | | | +--Serratia (4) | | | | | | | | | | | +--Serratiamarcescens (2) | | | | | | | | | | | | | +--Serratia marcescens subsp. marcescens Db11 (2) | | | | | | | | | | | +--Serratia marcescens FGI94 (2) | | | | | | | | | +--Serratia sp. Leaf50 (2) | | | | | | | | | +--Serratia sp. DD3 (2) | | | | | | | | | +--Rahnella (2) | | | | | | | | | | | +--Rahnella aquatilis CIP 78.65 = ATCC 33071 (2) | | | | | | | | | +--Chania (2) | | | | | | | | | +--Chania multitudinisentens RB-25 (2) | | | | | | | +--Pectobacteriaceae (4) | | | | | | | | | +--Sodalis praecaptivus (2) | | | | | | | | | +--Sodalis sp. TME1 (2) | | | | | | | +--Morganellaceae (15) | | | | | | | | | +--Xenorhabdus (5) | | | | | | | | | | | +--Xenorhabdus cabanillasii JM26 (2) | | | | | | | | | | | +--Xenorhabdus poinarii G6 (1) | | | | | | | | | | | +--Xenorhabdus szentirmaii DSM 16338 (2) | | | | | | | | | +--Moellerella (2) | | | | | | | | | | | +--Moellerella wisconsensis ATCC 35017 (2) | | | | | | | | | +--Morganella (2) | | | | | | | | | | | +--Morganellamorganii (2) | | | | | | | | | | | +--Morganella morganii subsp. morganii KT (2) | | | | | | | | | +--Providencia (6) | | | | | | | | | +--Providencia rettgeri Dmel1 (2) | | | | | | | | | +--Providencia sneebia DSM 19967 (2) | | | | | | | | | +--Providencia burhodogranariea DSM 19968 (2) | | | | | | | +--Enterobacteriaceae (42) | | | | | | | | | +--Cedecea (2) | | | | | | | | | | | +--Cedecea davisae DSM 4568 (2) | | | | | | | | | +--Kluyvera (2) | | | | | | | | | | | +--Kluyvera ascorbata ATCC 33433 (2) | | | | | | | | | +--Salmonella (6) | | | | | | | | | | | +--Salmonellaenterica (6) | | | | | | | | | | | +--Salmonellaentericasubsp.enterica (6) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Macclesfield str. S-1643 (2) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Enteritidis str. LA5 (2) | | | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Newport str. S09097 (2) | | | | | | | | | +--Izhakiella australiensis (2) | | | | | | | | | +--Yokenella (2) | | | | | | | | | | | +--Yokenella regensburgei ATCC 43003 (2) | | | | | | | | | +--Trabulsiella (2) | | | | | | | | | | | +--Trabulsiella guamensis ATCC 49490 (2) | | | | | | | | | +--Mangrovibacter sp. MFB070 (2) | | | | | | | | | +--Klebsiella sp. RIT-PI-d (2) | | | | | | | | | +--Escherichia (4) | | | | | | | | | | | +--Escherichia vulneris NBRC 102420 (2) | | | | | | | | | | | +--Escherichia coli ISC11 (2) | | | | | | | | | +--Klebsiella (10) | | | | | | | | | | | +--Klebsiella pneumoniae IS43 (2) | | | | | | | | | | | +--Klebsiella pneumoniae IS46 (2) | | | | | | | | | | | +--Klebsiella pneumoniae IS39 (2) | | | | | | | | | | | +--Klebsiella pneumoniae ISC21 (2) | | | | | | | | | | | +--Klebsiellapneumoniae (2) | | | | | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae DSM 30104 (2) | | | | | | | | | +--Enterobacter (2) | | | | | | | | | | | +--Enterobactercloacaecomplex (2) | | | | | | | | | | | +--Enterobacter cloacae S611 (2) | | | | | | | | | +--Buttiauxella (2) | | | | | | | | | | | +--Buttiauxella agrestis ATCC 33320 (2) | | | | | | | | | +--[Kluyvera] intestini (2) | | | | | | | | | +--Atlantibacter (2) | | | | | | | | | +--Atlantibacter hermannii NBRC 105704 (2) | | | | | | | +--unclassifiedEnterobacterales (2) | | | | | | | | | +--Plesiomonas (2) | | | | | | | | | +--Plesiomonas shigelloides 302-73 (2) | | | | | | | +--Budviciaceae (2) | | | | | | | | | +--Leminorella (2) | | | | | | | | | +--Leminorella grimontii ATCC 33999 = DSM 5078 (2) | | | | | | | +--Erwiniaceae (12) | | | | | | | | | +--Pantoea sp. PSNIH2 (1) | | | | | | | | | +--Pantoea latae (1) | | | | | | | | | +--Erwinia iniecta (2) | | | | | | | | | +--Erwinia sp. Leaf53 (2) | | | | | | | | | +--Pantoea sp. PSNIH1 (2) | | | | | | | | | +--Erwinia gerundensis (2) | | | | | | | | | +--Tatumella (2) | | | | | | | | | +--Tatumella ptyseos ATCC 33301 (2) | | | | | | | +--Hafniaceae (2) | | | | | | | +--Hafnia (2) | | | | | | | +--Hafnia alvei FB1 (2) | | | | | +--Aeromonadales (5) | | | | | | | +--Aeromonadaceae (5) | | | | | | | +--Aeromonas (1) | | | | | | | | | +--Aeromonas molluscorum 848 (1) | | | | | | | +--Oceanimonas sp. GK1 (1) | | | | | | | +--Aeromonas hydrophila subsp. hydrophila ATCC 7966 (2) | | | | | | | +--Aeromonas salmonicida subsp. salmonicida A449 (1) | | | | | +--Enterobacteriales (159) | | | | | | | +--primary endosymbiont of Sitophilus oryzae (2) | | | | | | | +--Enterobacteriaceae (157) | | | | | | | +--Serratia fonticola (2) | | | | | | | +--Pantoea gaviniae (1) | | | | | | | +--Yersinia intermedia ATCC 29909 (1) | | | | | | | +--Dickeya dadantii 3937 (2) | | | | | | | +--Pantoea stewartii subsp. stewartii DC283 (2) | | | | | | | +--Escherichia coli O157:H7 str. EC508 (1) | | | | | | | +--Proteus mirabilis ATCC 29906 (1) | | | | | | | +--Klebsiella pneumoniae 342 (1) | | | | | | | +--Brenneria sp. EniD312 (2) | | | | | | | +--Salmonella (6) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29 (1) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 (2) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 (1) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Typhi str. 404ty (1) | | | | | | | | | +--Salmonella enterica subsp. enterica serovar Newport str. SL254 (1) | | | | | | | +--Yersinia pestis FV-1 (1) | | | | | | | +--Pectobacterium atrosepticum SCRI1043 (3) | | | | | | | +--Escherichia coli K-12 (2) | | | | | | | +--Xenorhabdus nematophila ATCC 19061 (1) | | | | | | | +--Xenorhabdus doucetiae (1) | | | | | | | +--Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (3) | | | | | | | +--Pectobacterium carotovorum subsp. carotovorum WPP14 (1) | | | | | | | +--Shigella dysenteriae Sd197 (3) | | | | | | | +--Xenorhabdus sp. SF87 (2) | | | | | | | +--Erwinia tasmaniensis (3) | | | | | | | +--Tatumella morbirosei (1) | | | | | | | +--Enterobacter gergoviae (2) | | | | | | | +--Raoultella planticola (2) | | | | | | | +--Escherichia fergusonii ATCC 35469 (1) | | | | | | | +--Yersinia frederiksenii ATCC 33641 (1) | | | | | | | +--Pantoea dispersa (2) | | | | | | | +--Photorhabdus luminescens subsp. laumondii TTO1 (2) | | | | | | | +--Yersinia rohdei ATCC 43380 (1) | | | | | | | +--Escherichia coli CFT073 (1) | | | | | | | +--Erwinia billingiae (2) | | | | | | | +--Yersinia mollaretii ATCC 43969 (2) | | | | | | | +--Citrobacter rodentium ICC168 (2) | | | | | | | +--Providencia rettgeri (2) | | | | | | | +--Serratia (2) | | | | | | | | | +--Serratia symbiotica str. Tucson (2) | | | | | | | +--Escherichia albertii TW07627 (1) | | | | | | | +--Escherichia blattae DSM 4481 (2) | | | | | | | +--Proteus mirabilis (2) | | | | | | | +--Providencia rettgeri DSM 1131 (3) | | | | | | | +--Serratia symbiotica (2) | | | | | | | +--Lonsdalea quercina (2) | | | | | | | +--Leclercia adecarboxylata (2) | | | | | | | +--Sodalis glossinidius str. 'morsitans' (3) | | | | | | | +--Kluyvera intermedia (2) | | | | | | | +--Providencia rustigianii DSM 4541 (1) | | | | | | | +--Xenorhabdus vietnamensis (2) | | | | | | | +--Enterobacter aerogenes KCTC 2190 (2) | | | | | | | +--Yersinia pestis Angola (1) | | | | | | | +--Providencia stuartii ATCC 25827 (1) | | | | | | | +--Serratia sp. ATCC 39006 (2) | | | | | | | +--Proteus penneri ATCC 35198 (3) | | | | | | | +--Shigella boydii Sb227 (1) | | | | | | | +--Pantoea ananatis LMG 20103 (2) | | | | | | | +--Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- (3) | | | | | | | +--Xenorhabdus innexi (2) | | | | | | | +--Raoultella ornithinolytica (2) | | | | | | | +--Enterobacter cancerogenus ATCC 35316 (1) | | | | | | | +--Escherichia coli UMN026 (1) | | | | | | | +--Pantoea agglomerans (1) | | | | | | | +--Yersinia ruckeri (2) | | | | | | | +--Yersinia sp. M24tronco3 (2) | | | | | | | +--Serratia odorifera DSM 4582 (2) | | | | | | | +--Providencia alcalifaciens DSM 30120 (1) | | | | | | | +--Citrobacter youngae ATCC 29220 (1) | | | | | | | +--Serratia proteamaculans 568 (3) | | | | | | | +--Yersinia bercovieri ATCC 43970 (1) | | | | | | | +--Enterobacter sp. 638 (3) | | | | | | | +--Edwardsiella ictaluri 93-146 (1) | | | | | | | +--Escherichia coli 53638 (1) | | | | | | | +--Enterobacter (2) | | | | | | | | | +--Enterobacter cloacae SCF1 (2) | | | | | | | +--Pectobacterium carotovorum subsp. brasiliensis PBR1692 (1) | | | | | | | +--Citrobacter koseri ATCC BAA-895 (3) | | | | | | | +--Pantoea sp. At-9b (2) | | | | | | | +--Yersinia pestis CO92 (2) | | | | | | | +--Brenneria goodwinii (2) | | | | | | | +--Pragia fontium (2) | | | | | | | +--Cronobacter sakazakii ATCC BAA-894 (3) | | | | | | | +--Yersinia enterocolitica subsp. enterocolitica 8081 (1) | | | | | | | +--Erwinia mallotivora (2) | | | | | | | +--Yersinia pestis biovar Orientalis str. PEXU2 (1) | | | | | | | +--Enterobacter pulveris (2) | | | | | | | +--Erwinia tracheiphila (1) | | | | | | | +--Pantoea vagans C9-1 (2) | | | | | | | +--Pantoea wallisii (2) | | | | | | | +--Xenorhabdus bovienii SS-2004 (2) | | | | | | | +--Xenorhabdus beddingii (2) | | | | | | | +--Yersinia pseudotuberculosis IP 32953 (1) | | | | | | | +--Citrobacter sp. 30_2 (1) | | | | | +--Gallaecimonas sp. 3-C-1 (1) | | | +--Terrabacteriagroup (1) | | | +--Actinobacteria (1) | | | +--Actinobacteria (1) | | | +--Micrococcales (1) | | | +--Microbacteriaceae (1) | | | +--Microbacterium sp. SUBG005 (1) | +--Plautia stali symbiont (2)