# Species tree for RF02356 # Generated from Rfam version 14.10 | +--unclassifiedsequences (3) | | | +--metagenome sequence (1) | | | +--metagenomes (2) | | | +--bioreactor metagenome (1) | | | +--compost metagenome (1) | +--Eukaryota (2) | | | +--Viridiplantae (2) | | | +--Streptophyta (2) | | | +--Embryophyta (2) | | | +--Tracheophyta (2) | | | +--Spermatophyta (2) | | | +--Magnoliophyta (2) | | | +--eudicotyledons (2) | | | +--coreeudicotyledons (2) | | | +--Caryophyllales (2) | | | +--Amaranthaceae (2) | | | +--Beta vulgaris subsp. vulgaris (2) | +--Bacteria (185) | +--Proteobacteria (185) | +--Alphaproteobacteria (183) | | | +--Polymorphum gilvum SL003B-26A1 (2) | | | +--Rhizobiales bacterium WSM3557 (1) | | | +--Rhizobiales (160) | | | | | +--Brucellaceae (5) | | | | | | | +--Ochrobactrum (1) | | | | | | | | | +--Ochrobactrum intermedium 229E (1) | | | | | | | +--Brucella melitensis biovar Abortus 2308 (1) | | | | | | | +--Ochrobactrum pseudogrignonense (1) | | | | | | | +--Ochrobactrum anthropi ATCC 49188 (1) | | | | | | | +--Ochrobactrum sp. P6BS-III (1) | | | | | +--Methylocystaceae (1) | | | | | | | +--Methylocystis sp. SC2 (1) | | | | | +--Bradyrhizobiaceae bacterium SG-6C (2) | | | | | +--Phyllobacteriaceae (36) | | | | | | | +--Mesorhizobium sp. LC103 (1) | | | | | | | +--Mesorhizobium loti MAFF303099 (1) | | | | | | | +--Mesorhizobium sp. L48C026A00 (1) | | | | | | | +--Mesorhizobium loti (1) | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | +--Mesorhizobium australicum (1) | | | | | | | +--Mesorhizobium sp. Root554 (1) | | | | | | | +--Pseudaminobacter manganicus (1) | | | | | | | +--Mesorhizobium amorphae CCNWGS0123 (1) | | | | | | | +--Hoeflea phototrophica DFL-43 (1) | | | | | | | +--Aquamicrobium defluvii (1) | | | | | | | +--Mesorhizobium sp. SOD10 (1) | | | | | | | +--Mesorhizobium ciceri biovar biserrulae WSM1271 (1) | | | | | | | +--Aminobacter sp. Root100 (1) | | | | | | | +--Nitratireductor (2) | | | | | | | | | +--Nitratireductor aquibiodomus RA22 (1) | | | | | | | | | +--Nitratireductor indicus C115 (1) | | | | | | | +--Parvibaculum lavamentivorans DS-1 (1) | | | | | | | +--Nitratireductor sp. Pht-3B (1) | | | | | | | +--Nitratireductor basaltis (1) | | | | | | | +--Phyllobacterium sp. YR531 (1) | | | | | | | +--Mesorhizobium sp. B7 (1) | | | | | | | +--Hoeflea sp. BRH_c9 (1) | | | | | | | +--Mesorhizobium sp. UASWS1009 (1) | | | | | | | +--Mesorhizobium sp. Root157 (1) | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | +--Mesorhizobium sp. 65-26 (1) | | | | | | | +--Mesorhizobium (3) | | | | | | | | | +--Mesorhizobium huakuii 7653R (1) | | | | | | | | | +--Mesorhizobium alhagi CCNWXJ12-2 (1) | | | | | | | | | +--Mesorhizobium metallidurans STM 2683 (1) | | | | | | | +--Hoeflea sp. BAL378 (1) | | | | | | | +--Hoeflea sp. IMCC20628 (1) | | | | | | | +--Mesorhizobium loti R7A (1) | | | | | | | +--Mesorhizobium sp. LNHC252B00 (1) | | | | | | | +--Chelativorans sp. BNC1 (2) | | | | | +--unclassifiedRhizobiales (15) | | | | | | | +--Methyloceanibacter marginalis (1) | | | | | | | +--Methyloligella halotolerans (1) | | | | | | | +--Rhizobiales bacterium 63-22 (1) | | | | | | | +--Methylobrevis pamukkalensis (1) | | | | | | | +--Rhizobiales bacterium 65-79 (1) | | | | | | | +--Rhizobiales bacterium 65-9 (1) | | | | | | | +--Rhizobiales bacterium 62-47 (1) | | | | | | | +--Rhizobiales bacterium 68-8 (1) | | | | | | | +--Methyloceanibacter caenitepidi (1) | | | | | | | +--Pseudorhodoplanes sinuspersici (1) | | | | | | | +--Methyloceanibacter methanicus (1) | | | | | | | +--Rhizobiales bacterium 64-17 (1) | | | | | | | +--Rhizobiales bacterium HL-109 (1) | | | | | | | +--Rhizobiales bacterium 62-17 (1) | | | | | | | +--Methyloceanibacter superfactus (1) | | | | | +--Hyphomicrobiaceae (26) | | | | | | | +--Devosia sp. L15 (1) | | | | | | | +--Devosia sp. 66-22 (1) | | | | | | | +--Prosthecomicrobium enhydrum (1) | | | | | | | +--Pelagibacterium halotolerans B2 (1) | | | | | | | +--Devosia soli (1) | | | | | | | +--Candidatus Filomicrobium marinum (1) | | | | | | | +--Devosia geojensis (1) | | | | | | | +--Devosia riboflavina (1) | | | | | | | +--Devosia (1) | | | | | | | | | +--Devosia limi DSM 17137 (1) | | | | | | | +--Prosthecomicrobium hirschii (1) | | | | | | | +--Pelagibacterium sp. SCN 64-44 (2) | | | | | | | +--Pelagibacterium sp. SCN 63-23 (1) | | | | | | | +--Rhodoplanes sp. Z2-YC6860 (1) | | | | | | | +--Hyphomicrobium sp. NL23 (1) | | | | | | | +--Devosia sp. Root413D1 (1) | | | | | | | +--Devosia sp. H5989 (1) | | | | | | | +--Devosia epidermidihirudinis (1) | | | | | | | +--Hyphomicrobium sulfonivorans (1) | | | | | | | +--Devosia sp. Cr7-05 (1) | | | | | | | +--Hyphomicrobium sp. MC1 (1) | | | | | | | +--Blastochloris viridis (1) | | | | | | | +--Devosia sp. S37 (1) | | | | | | | +--Devosia sp. 67-54 (1) | | | | | | | +--Devosia sp. LC5 (1) | | | | | | | +--Pelagibacterium sp. SCN 63-126 (1) | | | | | +--Rhodobiaceae (2) | | | | | | | +--Tepidicaulis marinus (1) | | | | | | | +--Candidatus Phaeomarinobacter ectocarpi (1) | | | | | +--Xanthobacteraceae (3) | | | | | | | +--Starkeya novella DSM 506 (2) | | | | | | | +--Pseudolabrys sp. Root1462 (1) | | | | | +--Rhizobiaceae (2) | | | | | | | +--Kaistia (1) | | | | | | | | | +--Kaistia soli DSM 19436 (1) | | | | | | | +--Kaistia sp. SCN 65-12 (1) | | | | | +--Methylobacteriaceae (10) | | | | | | | +--Methylobacterium sp. Leaf93 (1) | | | | | | | +--Methylobacterium sp. 4-46 (1) | | | | | | | +--Methylobacterium sp. Leaf456 (1) | | | | | | | +--Microvirga vignae (1) | | | | | | | +--Methylobacterium nodulans ORS 2060 (1) | | | | | | | +--Methylobacterium extorquens AM1 (1) | | | | | | | +--Microvirga sp. BSC39 (1) | | | | | | | +--Microvirga ossetica (1) | | | | | | | +--Methylobacterium tarhaniae (1) | | | | | | | +--Methylobacterium indicum (1) | | | | | +--Phyllobacteriaceae bacterium AMV1 (1) | | | | | +--Bradyrhizobiaceae (56) | | | | | | | +--Bradyrhizobium sp. BR 10245 (1) | | | | | | | +--Bosea sp. Root381 (1) | | | | | | | +--Bradyrhizobium sp. BTAi1 (1) | | | | | | | +--Bosea sp. 67-29 (1) | | | | | | | +--Bosea vaviloviae (1) | | | | | | | +--Bradyrhizobium sp. STM 3843 (1) | | | | | | | +--Bradyrhizobium sp. LTSP849 (1) | | | | | | | +--Bradyrhizobium japonicum USDA 6 (1) | | | | | | | +--Afipia sp. 1NLS2 (1) | | | | | | | +--Bosea sp. AAP35 (1) | | | | | | | +--Rhodopseudomonas palustris BisA53 (1) | | | | | | | +--Bradyrhizobium japonicum USDA 110 (2) | | | | | | | +--Bradyrhizobium sp. Leaf396 (1) | | | | | | | +--Bosea sp. RAC05 (1) | | | | | | | +--Bradyrhizobium erythrophlei (1) | | | | | | | +--Bradyrhizobium sp. LTSP885 (1) | | | | | | | +--Afipia (1) | | | | | | | | | +--Afipia broomeae ATCC 49717 (1) | | | | | | | +--Rhodopseudomonas palustris BisB18 (2) | | | | | | | +--Rhodopseudomonas sp. R-45977 (1) | | | | | | | +--Afipia sp. 64-13 (1) | | | | | | | +--Bradyrhizobium lablabi (1) | | | | | | | +--Bradyrhizobium yuanmingense (1) | | | | | | | +--Bosea sp. WAO (1) | | | | | | | +--Bradyrhizobium sp. NAS80.1 (1) | | | | | | | +--Rhodopseudomonas palustris BisB5 (1) | | | | | | | +--Nitrobacter hamburgensis X14 (2) | | | | | | | +--Rhodopseudomonas palustris (1) | | | | | | | +--Afipia sp. P52-10 (1) | | | | | | | +--Afipia sp. GAS231 (1) | | | | | | | +--Bradyrhizobium elkanii (1) | | | | | | | +--Bradyrhizobium sp. ORS 278 (2) | | | | | | | +--Nitrobacter sp. 62-23 (1) | | | | | | | +--Bosea sp. Leaf344 (1) | | | | | | | +--Bradyrhizobium sp. AS23.2 (1) | | | | | | | +--Bosea sp. PAMC 26642 (1) | | | | | | | +--Bosea sp. TND4EK4 (1) | | | | | | | +--Bosea thiooxidans (1) | | | | | | | +--Afipia sp. 62-7 (1) | | | | | | | +--Bradyrhizobium sp. S23321 (1) | | | | | | | +--Rhodopseudomonas palustris TIE-1 (1) | | | | | | | +--Rhodopseudomonas palustris HaA2 (1) | | | | | | | +--Oligotropha carboxidovorans OM5 (1) | | | | | | | +--Nitrobacter winogradskyi Nb-255 (2) | | | | | | | +--Bradyrhizobium sp. BR3351 (1) | | | | | | | +--Bosea sp. Root483D1 (1) | | | | | | | +--Bosea sp. LC85 (1) | | | | | | | +--Afipia sp. Root123D2 (1) | | | | | | | +--Rhodopseudomonas palustris CGA009 (2) | | | | | | | +--Nitrobacter sp. Nb-311A (2) | | | | | +--Beijerinckiaceae (1) | | | | | +--Chelatococcus sp. CO-6 (1) | | | +--Rhodospirillales (1) | | | | | +--Rhodospirillaceae (1) | | | | | +--Magnetospirillum magnetotacticum (1) | | | +--Sneathiellales (1) | | | | | +--Sneathiellaceae (1) | | | | | +--Sneathiella sp. BFLP-8 (1) | | | +--unclassifiedAlphaproteobacteria (2) | | | | | +--Alphaproteobacteria bacterium 13_2_20CM_2_64_7 (2) | | | +--Rhodobacterales (16) | | | +--Rhodobacteraceae (16) | | | +--Nesiotobacter exalbescens (1) | | | +--Labrenzia sp. C1B10 (1) | | | +--Roseibium sp. TrichSKD4 (2) | | | +--Labrenzia alexandrii DFL-11 (2) | | | +--Rhodovulum sp. PH10 (1) | | | +--Labrenzia sp. YC6927 (1) | | | +--Labrenzia sp. VG12 (1) | | | +--Labrenzia alba (1) | | | +--Pseudovibrio sp. FO-BEG1 (1) | | | +--Ahrensia marina (1) | | | +--Labrenzia sp. OB1 (1) | | | +--Pannonibacter phragmitetus (1) | | | +--Labrenzia aggregata IAM 12614 (1) | | | +--Stappia sp. ES.058 (1) | +--unclassifiedProteobacteria (2) | +--Proteobacteria bacterium SG_bin9 (1) | +--Proteobacteria bacterium SG_bin8 (1)