# Species tree for RF03078 # Generated from Rfam version 14.10 | +--Eukaryota (1) | | | +--Alveolata (1) | | | +--Apicomplexa (1) | | | +--Coccidia (1) | | | +--Eucoccidiorida (1) | | | +--Eimeriorina (1) | | | +--Sarcocystidae (1) | | | +--Hammondia hammondi (1) | +--Bacteria (288) | | | +--Proteobacteria (287) | | | | | +--Alphaproteobacteria (284) | | | | | | | +--Rhizobiales bacterium WSM3557 (2) | | | | | | | +--Rhizobiales (193) | | | | | | | | | +--unclassifiedRhizobiales (1) | | | | | | | | | | | +--Methylobrevis pamukkalensis (1) | | | | | | | | | +--Hyphomicrobiaceae (9) | | | | | | | | | | | +--Prosthecomicrobium enhydrum (1) | | | | | | | | | | | +--Pelagibacterium halotolerans B2 (1) | | | | | | | | | | | +--Devosia geojensis (1) | | | | | | | | | | | +--Devosia riboflavina (2) | | | | | | | | | | | +--Hyphomicrobium sp. SCN 65-11 (1) | | | | | | | | | | | +--Hyphomicrobium denitrificans 1NES1 (1) | | | | | | | | | | | +--Prosthecomicrobium hirschii (1) | | | | | | | | | | | +--Pelagibacterium sp. SCN 64-44 (1) | | | | | | | | | +--Brucellaceae (1) | | | | | | | | | | | +--Ochrobactrum sp. P6BS-III (1) | | | | | | | | | +--Methylocystaceae (4) | | | | | | | | | | | +--Methylocystis sp. SC2 (3) | | | | | | | | | | | +--Methylocystis sp. H2s (1) | | | | | | | | | +--Rhizobiaceae (64) | | | | | | | | | | | +--Shinella sp. 65-6 (1) | | | | | | | | | | | +--Shinella sp. DD12 (2) | | | | | | | | | | | +--Kaistia sp. SCN 65-12 (1) | | | | | | | | | | | +--Rhizobium/Agrobacteriumgroup (32) | | | | | | | | | | | | | +--Rhizobium tibeticum (1) | | | | | | | | | | | | | +--Rhizobium lusitanum (1) | | | | | | | | | | | | | +--Rhizobium sp. Leaf453 (1) | | | | | | | | | | | | | +--Rhizobium sp. NT-26 (2) | | | | | | | | | | | | | +--Rhizobium (10) | | | | | | | | | | | | | | | +--Rhizobiumgallicum (1) | | | | | | | | | | | | | | | | | +--Rhizobium gallicum bv. gallicum R602 (1) | | | | | | | | | | | | | | | +--Rhizobium phaseoli Ch24-10 (1) | | | | | | | | | | | | | | | +--Rhizobium freirei PRF 81 (1) | | | | | | | | | | | | | | | +--Rhizobium mesoamericanum STM3625 (1) | | | | | | | | | | | | | | | +--Rhizobiumleguminosarum (6) | | | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. viciae Vc2 (1) | | | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. viciae TOM (1) | | | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. trifolii WSM597 (1) | | | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. phaseoli 4292 (1) | | | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. viciae Ps8 (1) | | | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. viciae Vh3 (1) | | | | | | | | | | | | | +--Rhizobium sp. R72 (1) | | | | | | | | | | | | | +--Rhizobium yanglingense (1) | | | | | | | | | | | | | +--Rhizobium sp. CF080 (1) | | | | | | | | | | | | | +--Rhizobium etli CFN 42 (2) | | | | | | | | | | | | | +--Rhizobium sp. CF142 (2) | | | | | | | | | | | | | +--Rhizobium etli CIAT 652 (2) | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. trifolii WSM1325 (1) | | | | | | | | | | | | | +--Rhizobium sp. 58 (1) | | | | | | | | | | | | | +--Pararhizobium polonicum (1) | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. viciae 3841 (2) | | | | | | | | | | | | | +--Rhizobium sp. LC145 (1) | | | | | | | | | | | | | +--Rhizobium etli CNPAF512 (1) | | | | | | | | | | | | | +--Rhizobium leguminosarum bv. trifolii WSM2304 (1) | | | | | | | | | | | +--Sinorhizobium/Ensifergroup (28) | | | | | | | | | | | +--Sinorhizobium meliloti BL225C (2) | | | | | | | | | | | +--Sinorhizobium saheli (1) | | | | | | | | | | | +--Ensifer (1) | | | | | | | | | | | | | +--Ensifer adhaerens OV14 (1) | | | | | | | | | | | +--Ensifer sp. LCM 4579 (2) | | | | | | | | | | | +--Ensifer sp. Root278 (1) | | | | | | | | | | | +--Sinorhizobium medicae WSM1115 (1) | | | | | | | | | | | +--Sinorhizobium meliloti AK83 (1) | | | | | | | | | | | +--Sinorhizobium medicae WSM419 (2) | | | | | | | | | | | +--Sinorhizobium meliloti 1021 (3) | | | | | | | | | | | +--Sinorhizobium fredii NGR234 (2) | | | | | | | | | | | +--Ensifer sp. YIC4027 (2) | | | | | | | | | | | +--Sinorhizobium (8) | | | | | | | | | | | | | +--Sinorhizobium meliloti CCNWSX0020 (1) | | | | | | | | | | | | | +--Sinorhizobium meliloti Rm41 (2) | | | | | | | | | | | | | +--Sinorhizobiumfrediigroup (2) | | | | | | | | | | | | | | | +--Sinorhizobium fredii USDA 257 (1) | | | | | | | | | | | | | | | +--Sinorhizobium fredii HH103 (1) | | | | | | | | | | | | | +--Sinorhizobium meliloti A0643DD (1) | | | | | | | | | | | | | +--Sinorhizobium meliloti 2011 (1) | | | | | | | | | | | | | +--Sinorhizobium meliloti H1 (1) | | | | | | | | | | | +--Sinorhizobium fredii GR64 (2) | | | | | | | | | +--Aurantimonadaceae (4) | | | | | | | | | | | +--Aurantimonas ureilytica (1) | | | | | | | | | | | +--Fulvimarina pelagi HTCC2506 (2) | | | | | | | | | | | +--Aurantimonas sp. 22II-16-19i (1) | | | | | | | | | +--Methylobacteriaceae (25) | | | | | | | | | | | +--Methylobacterium sp. 4-46 (4) | | | | | | | | | | | +--Methylobacterium populi BJ001 (2) | | | | | | | | | | | +--Methylorubrum (1) | | | | | | | | | | | | | +--Methylorubrum extorquens DSM 13060 (1) | | | | | | | | | | | +--Microvirga vignae (2) | | | | | | | | | | | +--Methylobacterium nodulans ORS 2060 (5) | | | | | | | | | | | +--Methylobacterium extorquens AM1 (2) | | | | | | | | | | | +--Methylobacterium sp. WSM2598 (2) | | | | | | | | | | | +--Microvirga sp. BSC39 (1) | | | | | | | | | | | +--Microvirga ossetica (3) | | | | | | | | | | | +--Methylobacterium chloromethanicum CM4 (2) | | | | | | | | | | | +--Methylobacterium extorquens PA1 (1) | | | | | | | | | +--Phyllobacteriaceae bacterium AMV1 (1) | | | | | | | | | +--Bradyrhizobiaceae (62) | | | | | | | | | | | +--Bosea sp. Root381 (1) | | | | | | | | | | | +--Afipia sp. P52-10 (1) | | | | | | | | | | | +--Afipia sp. GAS231 (1) | | | | | | | | | | | +--Bradyrhizobium sp. BR 10245 (4) | | | | | | | | | | | +--Bradyrhizobium sp. BTAi1 (2) | | | | | | | | | | | +--Bosea vaviloviae (1) | | | | | | | | | | | +--Bradyrhizobium sp. STM 3843 (4) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP849 (2) | | | | | | | | | | | +--Bradyrhizobium sp. ORS 278 (2) | | | | | | | | | | | +--Bradyrhizobium sp. ORS 285 (1) | | | | | | | | | | | +--Bosea sp. Leaf344 (1) | | | | | | | | | | | +--Bradyrhizobium sp. AS23.2 (4) | | | | | | | | | | | +--Bosea sp. AAP35 (1) | | | | | | | | | | | +--Bosea sp. PAMC 26642 (1) | | | | | | | | | | | +--Bosea thiooxidans (1) | | | | | | | | | | | +--Bradyrhizobium japonicum USDA 110 (8) | | | | | | | | | | | +--Bradyrhizobium sp. Leaf396 (2) | | | | | | | | | | | +--Bradyrhizobium sp. S23321 (1) | | | | | | | | | | | +--Bosea sp. RAC05 (1) | | | | | | | | | | | +--Bradyrhizobium erythrophlei (3) | | | | | | | | | | | +--Bradyrhizobium sp. BR3351 (3) | | | | | | | | | | | +--Bosea sp. Root483D1 (1) | | | | | | | | | | | +--Afipia (1) | | | | | | | | | | | | | +--Afipia broomeae ATCC 49717 (1) | | | | | | | | | | | +--Bradyrhizobium sp. LTSP885 (1) | | | | | | | | | | | +--Rhodopseudomonas sp. R-45977 (2) | | | | | | | | | | | +--Afipia sp. 64-13 (1) | | | | | | | | | | | +--Bradyrhizobium lablabi (1) | | | | | | | | | | | +--Bosea sp. WAO (1) | | | | | | | | | | | +--Nitrobacter sp. Nb-311A (3) | | | | | | | | | | | +--Bradyrhizobium sp. NAS80.1 (4) | | | | | | | | | | | +--Bradyrhizobium yuanmingense (1) | | | | | | | | | | | +--Bradyrhizobium sp. ORS 375 (1) | | | | | | | | | +--Phyllobacteriaceae (19) | | | | | | | | | | | +--Mesorhizobium sp. L48C026A00 (1) | | | | | | | | | | | +--Mesorhizobium loti MAFF303099 (2) | | | | | | | | | | | +--Mesorhizobium loti (1) | | | | | | | | | | | +--Mesorhizobium sp. ORS3428 (1) | | | | | | | | | | | +--Nitratireductor sp. Pht-3B (2) | | | | | | | | | | | +--Mesorhizobium opportunistum WSM2075 (1) | | | | | | | | | | | +--Mesorhizobium sp. LSHC420B00 (1) | | | | | | | | | | | +--Mesorhizobium sp. UASWS1009 (1) | | | | | | | | | | | +--Paramesorhizobium deserti (1) | | | | | | | | | | | +--Mesorhizobium amorphae CCNWGS0123 (1) | | | | | | | | | | | +--Mesorhizobium (2) | | | | | | | | | | | | | +--Mesorhizobium huakuii 7653R (1) | | | | | | | | | | | | | +--Mesorhizobium metallidurans STM 2683 (1) | | | | | | | | | | | +--Mesorhizobium sp. 65-26 (1) | | | | | | | | | | | +--Mesorhizobium loti R7A (1) | | | | | | | | | | | +--Mesorhizobium sp. SOD10 (1) | | | | | | | | | | | +--Mesorhizobium sp. LNHC252B00 (1) | | | | | | | | | | | +--Mesorhizobium ciceri biovar biserrulae WSM1271 (1) | | | | | | | | | +--Beijerinckiaceae (3) | | | | | | | | | +--Methylocella silvestris BL2 (2) | | | | | | | | | +--Chelatococcus sp. CO-6 (1) | | | | | | | +--Rhodospirillales (2) | | | | | | | | | +--Acetobacteraceae (1) | | | | | | | | | | | +--Acetobacteraceae bacterium AT-5844 (1) | | | | | | | | | +--Rhodospirillaceae (1) | | | | | | | | | +--Elstera litoralis (1) | | | | | | | +--Sphingomonadales (19) | | | | | | | | | +--Erythrobacteraceae (1) | | | | | | | | | | | +--Altererythrobacter sp. Root672 (1) | | | | | | | | | +--Sphingomonadaceae (18) | | | | | | | | | +--Sphingomonas koreensis (2) | | | | | | | | | +--Sphingomonas sp. Root241 (1) | | | | | | | | | +--Sphingomonas sp. Leaf357 (1) | | | | | | | | | +--Sphingomonas wittichii RW1 (2) | | | | | | | | | +--Sphingomonas sp. 66-10 (1) | | | | | | | | | +--Sphingomonas sp. WG (1) | | | | | | | | | +--Sphingobium chungbukense (1) | | | | | | | | | +--Sphingomonas sp. DP58 (1) | | | | | | | | | +--Sphingomonas sp. Leaf231 (1) | | | | | | | | | +--Sphingobium sp. 66-54 (1) | | | | | | | | | +--Sphingobium baderi (1) | | | | | | | | | +--Sphingomonas sp. TY (1) | | | | | | | | | +--Sphingomonas (1) | | | | | | | | | | | +--Sphingomonas changbaiensis NBRC 104936 (1) | | | | | | | | | +--Sphingomonas jeddahensis (1) | | | | | | | | | +--Sphingobium sp. SYK-6 (2) | | | | | | | +--SAR116cluster (2) | | | | | | | | | +--Candidatus Puniceispirillum marinum IMCC1322 (2) | | | | | | | +--unclassifiedAlphaproteobacteria (2) | | | | | | | | | +--Alphaproteobacteria bacterium MedPE-SWcel (1) | | | | | | | | | +--Alphaproteobacteria bacterium 64-6 (1) | | | | | | | +--Rhodobacterales (64) | | | | | | | +--Rhodobacteraceae bacterium SH6-1 (1) | | | | | | | +--Rhodobacteraceae bacterium HTCC2083 (2) | | | | | | | +--Rhodobacteraceae (59) | | | | | | | | | +--Roseovarius aestuarii (1) | | | | | | | | | +--Loktanella sp. 1ANDIMAR09 (1) | | | | | | | | | +--Paracoccus sp. SM22M-07 (1) | | | | | | | | | +--Sulfitobacter mediterraneus (1) | | | | | | | | | +--Roseovarius albus (1) | | | | | | | | | +--Haematobacter massiliensis (1) | | | | | | | | | +--Palleronia marisminoris (1) | | | | | | | | | +--Ruegeria sp. CECT 5091 (1) | | | | | | | | | +--Litoreibacter (1) | | | | | | | | | | | +--Litoreibacter arenae DSM 19593 (1) | | | | | | | | | +--Tropicibacter (1) | | | | | | | | | | | +--Tropicibacter litoreus R37 (1) | | | | | | | | | +--Thalassobius sp. GSW-6 (1) | | | | | | | | | +--Labrenzia aggregata IAM 12614 (1) | | | | | | | | | +--Roseovarius nubinhibens ISM (2) | | | | | | | | | +--Sulfitobacter (1) | | | | | | | | | | | +--Sulfitobacter donghicola DSW-25 = KCTC 12864 = JCM 14565 (1) | | | | | | | | | +--Roseovarius sp. NH52J (1) | | | | | | | | | +--Phaeobacter sp. G4 (1) | | | | | | | | | +--Labrenzia sp. VG12 (1) | | | | | | | | | +--Roseobacter sp. SK209-2-6 (2) | | | | | | | | | +--Paracoccus halophilus (1) | | | | | | | | | +--Roseovarius sp. BRH_c41 (1) | | | | | | | | | +--Shimia sp. SK013 (1) | | | | | | | | | +--Candidatus Rhodobacter lobularis (1) | | | | | | | | | +--Octadecabacter antarcticus 238 (1) | | | | | | | | | +--Oceanibulbus indolifex HEL-45 (2) | | | | | | | | | +--Silicibacter sp. TrichCH4B (1) | | | | | | | | | +--Marivita sp. DPG-28 (1) | | | | | | | | | +--Ruegeria sp. ANG-S4 (1) | | | | | | | | | +--Leisingera (1) | | | | | | | | | | | +--Leisingera methylohalidivorans DSM 14336 (1) | | | | | | | | | +--Phaeobacter sp. CECT 5382 (1) | | | | | | | | | +--Roseibium sp. TrichSKD4 (2) | | | | | | | | | +--Ruegeria atlantica (1) | | | | | | | | | +--Ruegeria sp. ANG-R (1) | | | | | | | | | +--Sulfitobacter geojensis (1) | | | | | | | | | +--Rhodobacteraceae bacterium GWF1_65_7 (1) | | | | | | | | | +--Roseovarius azorensis (1) | | | | | | | | | +--Rhodobacter sp. DW2-9 (1) | | | | | | | | | +--Paracoccus sediminis (1) | | | | | | | | | +--Celeribacter indicus (1) | | | | | | | | | +--Oceanicola litoreus (1) | | | | | | | | | +--Catellibacterium sp. CF17 (1) | | | | | | | | | +--Roseobacter sp. CCS2 (2) | | | | | | | | | +--Paracoccus denitrificans PD1222 (3) | | | | | | | | | +--Ruegeria meonggei (1) | | | | | | | | | +--Pelagicola litorisediminis (1) | | | | | | | | | +--Octadecabacter temperatus (1) | | | | | | | | | +--Roseovarius sp. 217 (2) | | | | | | | | | +--Labrenzia alba (1) | | | | | | | | | +--Sulfitobacter sp. EhC04 (1) | | | | | | | | | +--Pannonibacter phragmitetus (2) | | | | | | | | | +--Rhodobacter sphaeroides ATCC 17025 (1) | | | | | | | +--Rhodobacteraceae bacterium HTCC2150 (2) | | | | | +--Gammaproteobacteria (2) | | | | | | | +--Alteromonadales (1) | | | | | | | | | +--gamma proteobacterium IMCC1989 (1) | | | | | | | +--Chromatiales (1) | | | | | | | +--Chromatiales bacterium (ex Bugula neritina AB1) (1) | | | | | +--unclassifiedProteobacteria (1) | | | | | +--Proteobacteria bacterium SG_bin9 (1) | | | +--Terrabacteriagroup (1) | | | +--Cyanobacteria/Melainabacteriagroup (1) | | | +--Cyanobacteria (1) | | | +--Nostocales (1) | | | +--Scytonemataceae (1) | | | +--Scytonema (1) | | | +--Scytonema tolypothrichoides VB-61278 (1) | +--unclassified sequences (118)