# Species tree for RF03136 # Generated from Rfam version 14.10 | +--Eukaryota (3) | | | +--Metazoa (2) | | | | | +--Arthropoda (1) | | | | | | | +--Hexapoda (1) | | | | | | | +--Insecta (1) | | | | | | | +--Pterygota (1) | | | | | | | +--Neoptera (1) | | | | | | | +--Endopterygota (1) | | | | | | | +--Diptera (1) | | | | | | | +--Brachycera (1) | | | | | | | +--Muscomorpha (1) | | | | | | | +--Hippoboscoidea (1) | | | | | | | +--Glossinidae (1) | | | | | | | +--Glossina morsitans morsitans (1) | | | | | +--Platyhelminthes (1) | | | | | +--Cestoda (1) | | | | | +--Eucestoda (1) | | | | | +--Cyclophyllidea (1) | | | | | +--Hymenolepididae (1) | | | | | +--Hymenolepis nana (1) | | | +--Viridiplantae (1) | | | +--Streptophyta (1) | | | +--Embryophyta (1) | | | +--Tracheophyta (1) | | | +--Spermatophyta (1) | | | +--Magnoliophyta (1) | | | +--eudicotyledons (1) | | | +--coreeudicotyledons (1) | | | +--asterids (1) | | | +--lamiids (1) | | | +--Solanales (1) | | | +--Solanaceae (1) | | | +--Solanoideae (1) | | | +--Capsiceae (1) | | | +--Capsicum annuum (1) | +--rumen bacterium NK4A179 (1) | +--Bacteria (539) | | | +--Tenericutes (1) | | | | | +--Mollicutes (1) | | | | | +--Acholeplasmatales (1) | | | | | +--Acholeplasmataceae (1) | | | | | +--Acholeplasma oculi (1) | | | +--Terrabacteriagroup (344) | | | | | +--Tenericutes (2) | | | | | | | +--Mollicutes (1) | | | | | | | | | +--Acholeplasmatales (1) | | | | | | | | | +--Acholeplasmataceae (1) | | | | | | | | | +--Acholeplasma (1) | | | | | | | | | +--Acholeplasma palmae J233 (1) | | | | | | | +--Tenericutes bacterium RIFOXYB2_FULL_36_25 (1) | | | | | +--Firmicutes (342) | | | | | +--Firmicutes bacterium CAG:176 (1) | | | | | +--Firmicutes bacterium CAG:170 (1) | | | | | +--Firmicutes bacterium CAG:103 (1) | | | | | +--Firmicutes bacterium CAG:212 (1) | | | | | +--Firmicutes bacterium CAG:124 (1) | | | | | +--unclassifiedFirmicutessensustricto (5) | | | | | | | +--Firmicutes bacterium CAG:176_59_8 (1) | | | | | | | +--Firmicutes bacterium CAG:129_59_24 (1) | | | | | | | +--Firmicutes bacterium CAG:137_57_8 (1) | | | | | | | +--Firmicutes bacterium M10-2 (1) | | | | | | | +--Firmicutes bacterium ML8_F2 (1) | | | | | +--Erysipelotrichia (2) | | | | | | | +--Erysipelotrichales (2) | | | | | | | +--Erysipelotrichaceae (2) | | | | | | | +--Turicibacter sp. H121 (1) | | | | | | | +--Dubosiella newyorkensis (1) | | | | | +--Firmicutes bacterium CAG:646 (1) | | | | | +--Firmicutes bacterium CAG:137 (1) | | | | | +--Firmicutes bacterium CAG:534 (1) | | | | | +--Negativicutes (3) | | | | | | | +--Selenomonadales (3) | | | | | | | +--Sporomusaceae (2) | | | | | | | | | +--Anaerosporomusa subterranea (1) | | | | | | | | | +--Pelosinus (1) | | | | | | | | | +--Pelosinus fermentans B4 (1) | | | | | | | +--Selenomonadaceae (1) | | | | | | | +--Megamonas (1) | | | | | | | +--Megamonas funiformis YIT 11815 (1) | | | | | +--Firmicutes bacterium CAG:424 (1) | | | | | +--Firmicutes bacterium CAG:466 (1) | | | | | +--Firmicutes bacterium CAG:194 (1) | | | | | +--Firmicutes bacterium CAG:227 (1) | | | | | +--Firmicutes bacterium CAG:95 (1) | | | | | +--Firmicutes bacterium CAG:94 (1) | | | | | +--Firmicutes bacterium CAG:145 (1) | | | | | +--Firmicutes bacterium CAG:41 (1) | | | | | +--Firmicutes bacterium CAG:24 (1) | | | | | +--Firmicutes bacterium CAG:240 (1) | | | | | +--Firmicutes bacterium CAG:83 (1) | | | | | +--Clostridia (228) | | | | | | | +--unclassifiedClostridia (1) | | | | | | | | | +--Clostridia bacterium 41_269 (1) | | | | | | | +--Clostridiales (227) | | | | | | | +--Ruminococcaceae (30) | | | | | | | | | +--Ruminiclostridium sp. KB18 (1) | | | | | | | | | +--Subdoligranulum sp. 4_3_54A2FAA (1) | | | | | | | | | +--Ruminococcus sp. 37_24 (1) | | | | | | | | | +--Anaerotruncus (1) | | | | | | | | | | | +--Anaerotruncus sp. CAG:390 (1) | | | | | | | | | +--Ruminococcus (17) | | | | | | | | | | | +--Ruminococcus sp. CAG:330 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:254 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:403 (1) | | | | | | | | | | | +--Ruminococcus flavefaciens 007c (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:108 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:60 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:353 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:382 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:579 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:724 (1) | | | | | | | | | | | +--Ruminococcus callidus ATCC 27760 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:9 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:57 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:17 (1) | | | | | | | | | | | +--Ruminococcus sp. CAG:624 (1) | | | | | | | | | | | +--Ruminococcus obeum CAG:39 (1) | | | | | | | | | | | +--Ruminococcus torques CAG:61 (1) | | | | | | | | | +--Subdoligranulum sp. 60_17 (1) | | | | | | | | | +--Ruminococcaceae bacterium CPB6 (1) | | | | | | | | | +--Ruminococcus sp. DSM 100440 (1) | | | | | | | | | +--Ruminiclostridium (3) | | | | | | | | | | | +--[Clostridium] clariflavum DSM 19732 (1) | | | | | | | | | | | +--[Clostridium] straminisolvens JCM 21531 (1) | | | | | | | | | | | +--[Clostridium]stercorarium (1) | | | | | | | | | | | +--[Clostridium] stercorarium subsp. stercorarium DSM 8532 (1) | | | | | | | | | +--Ruminococcus sp. CAG:9-related_41_34 (1) | | | | | | | | | +--Anaerotruncus sp. G3(2012) (1) | | | | | | | | | +--Papillibacter (1) | | | | | | | | | +--Papillibacter cinnamivorans DSM 12816 (1) | | | | | | | +--Peptostreptococcaceae (2) | | | | | | | | | +--unclassifiedPeptostreptococcaceae (2) | | | | | | | | | +--Peptostreptococcaceae bacterium oral taxon 113 str. W5053 (2) | | | | | | | +--Eubacteriaceae (23) | | | | | | | | | +--Eubacterium (15) | | | | | | | | | | | +--Eubacterium sp. CAG:841 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:603 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:202 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:274 (1) | | | | | | | | | | | +--Eubacterium hallii CAG:12 (1) | | | | | | | | | | | +--Eubacterium plexicaudatum ASF492 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:76 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:786 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:38 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:192 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:161 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:156 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:252 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:581 (1) | | | | | | | | | | | +--Eubacterium sp. CAG:86 (1) | | | | | | | | | +--Alkalibacter (1) | | | | | | | | | | | +--Alkalibacter saccharofermentans DSM 14828 (1) | | | | | | | | | +--Eubacterium sp. An11 (1) | | | | | | | | | +--Eubacteriaceae bacterium CHKCI004 (1) | | | | | | | | | +--Eubacterium sp. 14-2 (2) | | | | | | | | | +--Garciella (1) | | | | | | | | | | | +--Garciella nitratireducens DSM 15102 (1) | | | | | | | | | +--Eubacteriaceae bacterium CHKCI005 (1) | | | | | | | | | +--Acetobacterium (1) | | | | | | | | | +--Acetobacterium woodii DSM 1030 (1) | | | | | | | +--Clostridiaceae (57) | | | | | | | | | +--Clostridium sp. C105KSO13 (1) | | | | | | | | | +--Clostridium sp. ATCC 29733 (1) | | | | | | | | | +--Thermobrachium (1) | | | | | | | | | | | +--Thermobrachium celere DSM 8682 (1) | | | | | | | | | +--Clostridium sp. CAG:217_53_7 (1) | | | | | | | | | +--Caloramator quimbayensis (1) | | | | | | | | | +--Clostridium amylolyticum (1) | | | | | | | | | +--Clostridium sp. KLE 1755 (1) | | | | | | | | | +--Clostridium bornimense (1) | | | | | | | | | +--Hungatella (1) | | | | | | | | | | | +--Hungatella hathewayi 12489931 (1) | | | | | | | | | +--Clostridium (38) | | | | | | | | | | | +--Clostridium clostridioforme CAG:132 (1) | | | | | | | | | | | +--Clostridium sp. CAG:352 (1) | | | | | | | | | | | +--Clostridium sp. CAG:75 (1) | | | | | | | | | | | +--Clostridium sp. CAG:7 (1) | | | | | | | | | | | +--Clostridium cavendishii DSM 21758 (1) | | | | | | | | | | | +--Clostridium intestinale URNW (1) | | | | | | | | | | | +--Clostridium sp. CAG:253 (1) | | | | | | | | | | | +--Clostridium sp. CAG:217 (1) | | | | | | | | | | | +--Clostridium sp. CAG:590 (1) | | | | | | | | | | | +--Clostridium sp. CAG:510 (1) | | | | | | | | | | | +--Clostridium sp. CAG:1013 (1) | | | | | | | | | | | +--Clostridium sp. CAG:167 (1) | | | | | | | | | | | +--Clostridium sp. CAG:557 (1) | | | | | | | | | | | +--Clostridium sp. CAG:413 (1) | | | | | | | | | | | +--Clostridium sp. CAG:417 (1) | | | | | | | | | | | +--Clostridium chauvoei JF4335 (1) | | | | | | | | | | | +--Clostridium sp. CAG:62 (1) | | | | | | | | | | | +--Clostridium bolteae CAG:59 (1) | | | | | | | | | | | +--Clostridium sp. CAG:58 (1) | | | | | | | | | | | +--Clostridium cylindrosporum DSM 605 (1) | | | | | | | | | | | +--Clostridium sp. CAG:465 (1) | | | | | | | | | | | +--Clostridium sp. CAG:230 (1) | | | | | | | | | | | +--Clostridium leptum CAG:27 (1) | | | | | | | | | | | +--Clostridium sp. CAG:299 (1) | | | | | | | | | | | +--Clostridium sp. CAG:169 (1) | | | | | | | | | | | +--Clostridium sp. CAG:127 (1) | | | | | | | | | | | +--Clostridium hathewayi CAG:224 (1) | | | | | | | | | | | +--Clostridium sp. CAG:964 (1) | | | | | | | | | | | +--Clostridium sp. CAG:242 (1) | | | | | | | | | | | +--Clostridium sp. CAG:277 (1) | | | | | | | | | | | +--Clostridium sp. CAG:632 (1) | | | | | | | | | | | +--Clostridium sp. CAG:448 (1) | | | | | | | | | | | +--Clostridium sp. CAG:451 (1) | | | | | | | | | | | +--Clostridium nexile CAG:348 (1) | | | | | | | | | | | +--Clostridium celatum DSM 1785 (1) | | | | | | | | | | | +--Clostridium sp. CAG:43 (1) | | | | | | | | | | | +--Clostridium sp. CAG:411 (1) | | | | | | | | | | | +--Clostridium sp. CAG:264 (1) | | | | | | | | | +--Geosporobacter ferrireducens (1) | | | | | | | | | +--Caldisalinibacter kiritimatiensis (1) | | | | | | | | | +--Paramaledivibacter (1) | | | | | | | | | | | +--Paramaledivibacter caminithermalis DSM 15212 (1) | | | | | | | | | +--Lactonifactor (1) | | | | | | | | | | | +--Lactonifactor longoviformis DSM 17459 (1) | | | | | | | | | +--Clostridium sp. W14A (1) | | | | | | | | | +--Geosporobacter (1) | | | | | | | | | | | +--Geosporobacter subterraneus DSM 17957 (1) | | | | | | | | | +--Butyricicoccus (1) | | | | | | | | | | | +--Butyricicoccus pullicaecorum 1.2 (1) | | | | | | | | | +--Clostridium sp. FS41 (2) | | | | | | | | | +--Clostridiaceae bacterium MS3 (1) | | | | | | | +--Clostridialesincertaesedis (1) | | | | | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (1) | | | | | | | | | +--Eubacterium nodatum ATCC 33099 (1) | | | | | | | +--Lachnospiraceae (85) | | | | | | | | | +--Lachnospiraceae bacterium 10-1 (1) | | | | | | | | | +--Blautia sp. An249 (1) | | | | | | | | | +--Lachnospiraceae bacterium (1) | | | | | | | | | +--Lachnospiraceae bacterium CAG:364 (1) | | | | | | | | | +--Blautia sp. YL58 (1) | | | | | | | | | +--Roseburia sp. 499 (1) | | | | | | | | | +--Anaerobium acetethylicum (1) | | | | | | | | | +--Dorea (3) | | | | | | | | | | | +--Dorea sp. CAG:317 (1) | | | | | | | | | | | +--Dorea longicatena AGR2136 (1) | | | | | | | | | | | +--Dorea longicatena CAG:42 (1) | | | | | | | | | +--Pseudobutyrivibrio (1) | | | | | | | | | | | +--Pseudobutyrivibrio xylanivorans DSM 14809 (1) | | | | | | | | | +--Anaerocolumna (2) | | | | | | | | | | | +--Anaerocolumna jejuensis DSM 15929 (1) | | | | | | | | | | | +--Anaerocolumna xylanovorans DSM 12503 (1) | | | | | | | | | +--Lachnobacterium (1) | | | | | | | | | | | +--Lachnobacterium bovis DSM 14045 (1) | | | | | | | | | +--Hespellia (1) | | | | | | | | | | | +--Hespellia stercorisuis DSM 15480 (1) | | | | | | | | | +--Anaerostipes (1) | | | | | | | | | | | +--Anaerostipes sp. CAG:276 (1) | | | | | | | | | +--Lachnospiraceae bacterium CAG:215 (1) | | | | | | | | | +--Lachnospiraceae bacterium VE202-12 (1) | | | | | | | | | +--Anaerostipes sp. 992a (1) | | | | | | | | | +--Lachnoclostridium sp. An169 (1) | | | | | | | | | +--Roseburia sp. 831b (1) | | | | | | | | | +--Lachnoclostridium sp. An118 (1) | | | | | | | | | +--Lachnoclostridium sp. An196 (1) | | | | | | | | | +--Lachnospiraceae bacterium NC2008 (1) | | | | | | | | | +--Lachnoclostridium sp. An298 (1) | | | | | | | | | +--Mediterraneibacter (1) | | | | | | | | | | | +--[Ruminococcus] gnavus AGR2154 (1) | | | | | | | | | +--Lachnoclostridium sp. YL32 (1) | | | | | | | | | +--Blautia sp. An46 (1) | | | | | | | | | +--Lachnoclostridium (3) | | | | | | | | | | | +--[Clostridium] scindens VE202-05 (1) | | | | | | | | | | | +--[Clostridium] bolteae 90A9 (1) | | | | | | | | | | | +--[Clostridium] clostridioforme 90A7 (1) | | | | | | | | | +--Lachnospiraceae bacterium M18-1 (2) | | | | | | | | | +--Lachnoclostridium sp. An131 (1) | | | | | | | | | +--Lachnospiraceae bacterium 3-2 (2) | | | | | | | | | +--Roseburia (9) | | | | | | | | | | | +--Roseburia sp. CAG:50 (1) | | | | | | | | | | | +--Roseburia inulinivorans CAG:15 (1) | | | | | | | | | | | +--Roseburia sp. CAG:45 (1) | | | | | | | | | | | +--Roseburia sp. CAG:197 (1) | | | | | | | | | | | +--Roseburia sp. CAG:303 (1) | | | | | | | | | | | +--Roseburia sp. CAG:18 (1) | | | | | | | | | | | +--Roseburia sp. CAG:100 (1) | | | | | | | | | | | +--Roseburia sp. CAG:309 (1) | | | | | | | | | | | +--Roseburia sp. CAG:182 (1) | | | | | | | | | +--Coprococcus (4) | | | | | | | | | | | +--Coprococcus eutactus CAG:665 (1) | | | | | | | | | | | +--Coprococcus sp. CAG:782 (1) | | | | | | | | | | | +--Coprococcus comes CAG:19 (1) | | | | | | | | | | | +--Coprococcus sp. HPP0074 (1) | | | | | | | | | +--Butyrivibrio sp. AE3009 (1) | | | | | | | | | +--Lachnospiraceae bacterium TWA4 (1) | | | | | | | | | +--Butyrivibrio sp. XPD2006 (1) | | | | | | | | | +--Dorea sp. 42_8 (1) | | | | | | | | | +--Coprococcus sp. HPP0048 (1) | | | | | | | | | +--Lachnospiraceae bacterium JC7 (1) | | | | | | | | | +--Enterocloster (2) | | | | | | | | | | | +--[Clostridium] clostridioforme 90A3 (1) | | | | | | | | | | | +--[Clostridium] citroniae WAL-19142 (1) | | | | | | | | | +--Butyrivibrio (11) | | | | | | | | | | | +--Butyrivibrio sp. AE2015 (1) | | | | | | | | | | | +--Butyrivibrio sp. LB2008 (1) | | | | | | | | | | | +--Butyrivibrio fibrisolvens AB2020 (1) | | | | | | | | | | | +--Butyrivibrio sp. MC2021 (1) | | | | | | | | | | | +--Butyrivibrio fibrisolvens FE2007 (1) | | | | | | | | | | | +--Butyrivibrio sp. CAG:318 (1) | | | | | | | | | | | +--Butyrivibrio sp. AD3002 (1) | | | | | | | | | | | +--Butyrivibrio crossotus CAG:259 (1) | | | | | | | | | | | +--Butyrivibrio sp. WCD2001 (1) | | | | | | | | | | | +--Butyrivibrio sp. FCS006 (1) | | | | | | | | | | | +--Butyrivibrio fibrisolvens DSM 3071 (1) | | | | | | | | | +--Butyrivibrio sp. NC2007 (1) | | | | | | | | | +--Lachnospiraceae bacterium COE1 (1) | | | | | | | | | +--Anaerosporobacter (1) | | | | | | | | | | | +--Anaerosporobacter mobilis DSM 15930 (1) | | | | | | | | | +--Parasporobacterium (1) | | | | | | | | | | | +--Parasporobacterium paucivorans DSM 15970 (1) | | | | | | | | | +--Lachnoclostridium sp. An14 (1) | | | | | | | | | +--Lachnoclostridium sp. An76 (1) | | | | | | | | | +--Robinsoniella sp. RHS (1) | | | | | | | | | +--Herbinix luporum (1) | | | | | | | | | +--Dorea sp. 5-2 (2) | | | | | | | | | +--Blautia (5) | | | | | | | | | | | +--Blautia sp. CAG:37 (1) | | | | | | | | | | | +--Blautia sp. CAG:257 (1) | | | | | | | | | | | +--Blautia sp. CAG:237 (1) | | | | | | | | | | | +--Blautia sp. CAG:52 (1) | | | | | | | | | | | +--Blautia hydrogenotrophica CAG:147 (1) | | | | | | | | | +--Schaedlerella arabinosiphila (1) | | | | | | | | | +--Roseburia sp. 40_7 (1) | | | | | | | +--unclassifiedClostridiales (25) | | | | | | | | | +--Gottschalkia (1) | | | | | | | | | | | +--[Clostridium] acidurici 9a (1) | | | | | | | | | +--Proteiniborus sp. DW1 (1) | | | | | | | | | +--Clostridiales bacterium VE202-26 (1) | | | | | | | | | +--Clostridiales bacterium 44_9 (1) | | | | | | | | | +--Clostridiales bacterium KLE1615 (1) | | | | | | | | | +--Clostridiales bacterium 38_11 (1) | | | | | | | | | +--Clostridiales bacterium GWD2_32_19 (1) | | | | | | | | | +--Clostridiales bacterium GWF2_36_10 (1) | | | | | | | | | +--Clostridiales bacterium GWE2_32_10 (1) | | | | | | | | | +--Epulopiscium sp. AS2M-Bin002 (1) | | | | | | | | | +--Clostridiales bacterium VE202-29 (1) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin001 (1) | | | | | | | | | +--Clostridiales bacterium 41_21_two_genomes (2) | | | | | | | | | +--Flavonifractor (1) | | | | | | | | | | | +--Flavonifractor plautii ATCC 29863 (1) | | | | | | | | | +--Clostridiales bacterium VE202-28 (1) | | | | | | | | | +--Epulopiscium sp. Nuni2H_MBin003 (1) | | | | | | | | | +--Clostridiales bacterium CHKCI001 (1) | | | | | | | | | +--Clostridiales bacterium 42_27 (1) | | | | | | | | | +--Clostridiales bacterium GWD2_32_59 (1) | | | | | | | | | +--Clostridiales bacterium 41_12_two_minus (1) | | | | | | | | | +--Clostridiales bacterium 52_15 (1) | | | | | | | | | +--Clostridiales bacterium Nov_37_41 (1) | | | | | | | | | +--Epulopiscium sp. Nele67-Bin005 (1) | | | | | | | | | +--Epulopiscium sp. SCG-B11WGA-EpuloA1 (1) | | | | | | | +--Oscillospiraceae (3) | | | | | | | | | +--Oscillibacter (2) | | | | | | | | | | | +--Oscillibacter sp. CAG:155 (1) | | | | | | | | | | | +--Oscillibacter sp. CAG:241 (1) | | | | | | | | | +--Oscillibacter sp. 57_20 (1) | | | | | | | +--Peptococcaceae (1) | | | | | | | +--Desulfotomaculum (1) | | | | | | | +--Desulfotomaculum hydrothermale Lam5 = DSM 18033 (1) | | | | | +--Firmicutes bacterium CAG:238 (1) | | | | | +--Firmicutes bacterium CAG:56 (1) | | | | | +--Bacilli (75) | | | | | | | +--Lactobacillales (21) | | | | | | | | | +--Leuconostocaceae (1) | | | | | | | | | | | +--Weissella (1) | | | | | | | | | | | +--Weissella halotolerans DSM 20190 (1) | | | | | | | | | +--Carnobacteriaceae (1) | | | | | | | | | | | +--Carnobacterium sp. CP1 (1) | | | | | | | | | +--Streptococcaceae (10) | | | | | | | | | | | +--Streptococcus (4) | | | | | | | | | | | | | +--Streptococcus pyogenes serotype M1 (1) | | | | | | | | | | | | | +--Streptococcusdysgalactiaegroup (1) | | | | | | | | | | | | | | | +--Streptococcusdysgalactiae (1) | | | | | | | | | | | | | | | +--Streptococcus dysgalactiae subsp. equisimilis RE378 (1) | | | | | | | | | | | | | +--Streptococcusanginosusgroup (1) | | | | | | | | | | | | | | | +--Streptococcus intermedius B196 (1) | | | | | | | | | | | | | +--Streptococcus ratti FA-1 = DSM 20564 (1) | | | | | | | | | | | +--Streptococcus sp. DD11 (1) | | | | | | | | | | | +--Streptococcus sp. HSISM1 (1) | | | | | | | | | | | +--Floricoccus tropicus (1) | | | | | | | | | | | +--Lactococcus (1) | | | | | | | | | | | | | +--Lactococcuslactis (1) | | | | | | | | | | | | | +--Lactococcus lactis subsp. cremoris TIFN6 (1) | | | | | | | | | | | +--Streptococcus sp. 'caviae' (1) | | | | | | | | | | | +--Streptococcus sp. DD12 (1) | | | | | | | | | +--Enterococcaceae (1) | | | | | | | | | | | +--Tetragenococcus (1) | | | | | | | | | | | +--Tetragenococcus muriaticus 3MR10-3 (1) | | | | | | | | | +--Lactobacillaceae (8) | | | | | | | | | +--Lactobacillus mixtipabuli (1) | | | | | | | | | +--Lactobacillus (5) | | | | | | | | | | | +--Lactobacillus fabifermentans T30PCM01 (1) | | | | | | | | | | | +--Lactobacillus buchneri CD034 (1) | | | | | | | | | | | +--Lactobacillus ghanensis DSM 18630 (1) | | | | | | | | | | | +--Lactobacillus oryzae JCM 18671 (1) | | | | | | | | | | | +--Lactobacillus silagei JCM 19001 (1) | | | | | | | | | +--Lactobacillus curieae (1) | | | | | | | | | +--Lactobacillus wasatchensis (1) | | | | | | | +--Bacillales (54) | | | | | | | +--Planococcaceae (2) | | | | | | | | | +--Sporosarcina sp. HYO08 (1) | | | | | | | | | +--Bhargavaea (1) | | | | | | | | | +--Bhargavaea cecembensis DSE10 (1) | | | | | | | +--Alicyclobacillaceae (2) | | | | | | | | | +--Tumebacillus algifaecis (1) | | | | | | | | | +--Tumebacillus sp. AR23208 (1) | | | | | | | +--Paenibacillaceae (6) | | | | | | | | | +--Paenibacillus sp. 32O-W (1) | | | | | | | | | +--Paenibacillus (2) | | | | | | | | | | | +--Paenibacillus mucilaginosus 3016 (1) | | | | | | | | | | | +--Paenibacillus popilliae ATCC 14706 (1) | | | | | | | | | +--Paenibacillus sp. Leaf72 (1) | | | | | | | | | +--Aneurinibacillusgroup (1) | | | | | | | | | | | +--Aneurinibacillus sp. XH2 (1) | | | | | | | | | +--Paenibacillus oryzae (1) | | | | | | | +--Bacillaceae (40) | | | | | | | | | +--Bacillus sp. LL01 (2) | | | | | | | | | +--Bacillus glycinifermentans (1) | | | | | | | | | +--Bacillus sp. SGD-V-76 (1) | | | | | | | | | +--Halobacillus sp. BBL2006 (1) | | | | | | | | | +--Bacillus obstructivus (1) | | | | | | | | | +--Bacillus campisalis (1) | | | | | | | | | +--Bacillus sp. JCM 19045 (1) | | | | | | | | | +--Bacillus solimangrovi (1) | | | | | | | | | +--Anaerobacillus sp. NB2006 (1) | | | | | | | | | +--Bacillus nakamurai (1) | | | | | | | | | +--Bacillus sp. CHD6a (1) | | | | | | | | | +--Bacillus sp. TS-2 (1) | | | | | | | | | +--Bacillus sp. VT-16-64 (1) | | | | | | | | | +--Bacillus sp. FJAT-27231 (1) | | | | | | | | | +--Bacillus gobiensis (1) | | | | | | | | | +--Domibacillus iocasae (1) | | | | | | | | | +--Halobacillus sp. BAB-2008 (1) | | | | | | | | | +--Bacillus (6) | | | | | | | | | | | +--Bacillus lehensis G1 (1) | | | | | | | | | | | +--Bacillus hemicellulosilyticus JCM 9152 (1) | | | | | | | | | | | +--Bacillus selenatarsenatis SF-1 (1) | | | | | | | | | | | +--Bacillus akibai JCM 9157 (1) | | | | | | | | | | | +--Bacillus alcalophilus ATCC 27647 = CGMCC 1.3604 (1) | | | | | | | | | | | +--Bacillus azotoformans LMG 9581 (1) | | | | | | | | | +--Bacillus weihaiensis (1) | | | | | | | | | +--Lysinibacillus (4) | | | | | | | | | | | +--Lysinibacillus odysseyi 34hs-1 = NBRC 100172 (1) | | | | | | | | | | | +--Lysinibacillus manganicus DSM 26584 (1) | | | | | | | | | | | +--Lysinibacillus sinduriensis BLB-1 = JCM 15800 (1) | | | | | | | | | | | +--Lysinibacillus massiliensis 4400831 = CIP 108448 = CCUG 49529 (1) | | | | | | | | | +--Bacillus sp. B-jedd (1) | | | | | | | | | +--Parageobacillus (1) | | | | | | | | | | | +--Parageobacillus caldoxylosilyticus NBRC 107762 (1) | | | | | | | | | +--Anoxybacillus sp. B7M1 (1) | | | | | | | | | +--Bacillus sp. FJAT-18017 (1) | | | | | | | | | +--Domibacillus antri (1) | | | | | | | | | +--Lysinibacillus sp. BF-4 (1) | | | | | | | | | +--Pontibacillus (5) | | | | | | | | | +--Pontibacillus marinus BH030004 = DSM 16465 (1) | | | | | | | | | +--Pontibacillus chungwhensis BH030062 (1) | | | | | | | | | +--Pontibacillus litoralis JSM 072002 (1) | | | | | | | | | +--Pontibacillus yanchengensis Y32 (1) | | | | | | | | | +--Pontibacillus halophilus JSM 076056 = DSM 19796 (1) | | | | | | | +--Listeriaceae (1) | | | | | | | | | +--Listeria booriae (1) | | | | | | | +--Sporolactobacillaceae (1) | | | | | | | | | +--Sporolactobacillus (1) | | | | | | | | | +--Sporolactobacillus laevolacticus DSM 442 (1) | | | | | | | +--Thermoactinomycetaceae (2) | | | | | | | +--Thermoactinomyces sp. Gus2-1 (1) | | | | | | | +--Marininema halotolerans (1) | | | | | +--Firmicutes bacterium CAG:791 (1) | | | | | +--Firmicutes bacterium CAG:129 (1) | | | | | +--Firmicutes bacterium CAG:102 (1) | | | | | +--Tissierellia (5) | | | | | +--Tissierellales (4) | | | | | | | +--Sporanaerobacter sp. PP17-6a (1) | | | | | | | +--Sporanaerobacter (1) | | | | | | | | | +--Sporanaerobacter acetigenes DSM 13106 (1) | | | | | | | +--Tissierellaceae (2) | | | | | | | +--Tissierella (2) | | | | | | | +--Tissierella creatinophila DSM 6911 (1) | | | | | | | +--Tissierella praeacuta DSM 18095 (1) | | | | | +--unclassifiedTissierellia (1) | | | | | +--Dethiosulfatibacter (1) | | | | | +--Dethiosulfatibacter aminovorans DSM 17477 (1) | | | +--Haloplasmatales (1) | | | | | +--Haloplasmataceae (1) | | | | | +--Haloplasma contractile SSD-17B (1) | | | +--FCBgroup (1) | | | | | +--Bacteroidetes/Chlorobigroup (1) | | | | | +--Bacteroidetes (1) | | | | | +--Bacteroidia (1) | | | | | +--Bacteroidales (1) | | | | | +--Bacteroidaceae (1) | | | | | +--Bacteroides (1) | | | | | +--Bacteroides pectinophilus CAG:437 (1) | | | +--Firmicutes (192) | | | +--Clostridia (131) | | | | | +--Thermoanaerobacterales (2) | | | | | | | +--ThermoanaerobacteralesFamilyIII.IncertaeSedis (2) | | | | | | | +--Caldicellulosiruptor saccharolyticus DSM 8903 (1) | | | | | | | +--Caldicellulosiruptor owensensis OL (1) | | | | | +--butyrate-producing bacterium SS3/4 (1) | | | | | +--Clostridiales bacterium 1_7_47FAA (2) | | | | | +--Clostridiales (126) | | | | | +--Lachnospiraceae bacterium OBRC5-5 (1) | | | | | +--Lachnospiraceae bacterium 2_1_58FAA (1) | | | | | +--Lachnospiraceae bacterium ACC2 (2) | | | | | +--Lachnospiraceae bacterium 9_1_43BFAA (1) | | | | | +--Eubacteriaceae (16) | | | | | | | +--Anaerofustis stercorihominis DSM 17244 (1) | | | | | | | +--Eubacterium limosum KIST612 (1) | | | | | | | +--Eubacterium ventriosum ATCC 27560 (1) | | | | | | | +--Pseudoramibacter alactolyticus ATCC 23263 (1) | | | | | | | +--Acetobacterium wieringae (1) | | | | | | | +--Eubacterium ruminantium (1) | | | | | | | +--Eubacterium angustum (1) | | | | | | | +--Acetobacterium bakii (1) | | | | | | | +--Eubacterium hadrum (1) | | | | | | | +--Eubacterium rectale ATCC 33656 (1) | | | | | | | +--Eubacterium eligens ATCC 27750 (1) | | | | | | | +--Eubacterium coprostanoligenes (1) | | | | | | | +--Eubacterium uniforme (1) | | | | | | | +--Eubacterium hallii DSM 3353 (1) | | | | | | | +--Eubacterium cellulosolvens 6 (2) | | | | | +--Lachnospiraceae (28) | | | | | | | +--Roseburia intestinalis L1-82 (1) | | | | | | | +--Catonella morbi ATCC 51271 (2) | | | | | | | +--Pseudobutyrivibrio ruminis (1) | | | | | | | +--Butyrivibrio hungatei (1) | | | | | | | +--Coprococcus catus GD/7 (1) | | | | | | | +--Oribacterium sp. oral taxon 078 str. F0262 (1) | | | | | | | +--Dorea formicigenerans 4_6_53AFAA (1) | | | | | | | +--Butyrivibrio proteoclasticus B316 (1) | | | | | | | +--Dorea formicigenerans ATCC 27755 (1) | | | | | | | +--Clostridium proteoclasticum (1) | | | | | | | +--Roseburia inulinivorans DSM 16841 (1) | | | | | | | +--Oribacterium sp. ACB1 (1) | | | | | | | +--Butyrivibrio fibrisolvens 16/4 (1) | | | | | | | +--Johnsonella ignava ATCC 51276 (2) | | | | | | | +--Marvinbryantia formatexigens DSM 14469 (2) | | | | | | | +--Roseburia hominis A2-183 (1) | | | | | | | +--Butyrivibrio crossotus DSM 2876 (1) | | | | | | | +--Oribacterium sinus F0268 (1) | | | | | | | +--Clostridium lentocellum DSM 5427 (2) | | | | | | | +--Roseburia intestinalis XB6B4 (1) | | | | | | | +--Dorea longicatena DSM 13814 (1) | | | | | | | +--Lachnobacterium bovis (1) | | | | | | | +--Coprococcus comes ATCC 27758 (1) | | | | | | | +--Shuttleworthia satelles DSM 14600 (1) | | | | | +--Lachnospiraceae bacterium ICM7 (2) | | | | | +--Ruminococcaceae (15) | | | | | | | +--Ruminococcus sp. 18P13 (1) | | | | | | | +--Ruminococcus sp. JC304 (1) | | | | | | | +--Anaerotruncus colihominis DSM 17241 (1) | | | | | | | +--Faecalibacterium prausnitzii SL3/3 (1) | | | | | | | +--Ruminococcus albus 8 (1) | | | | | | | +--Ruminococcus albus 7 (1) | | | | | | | +--Ruminococcus sp. SR1/5 (1) | | | | | | | +--Ethanoligenens harbinense YUAN-3 (1) | | | | | | | +--Ruminococcus sp. YE71 (1) | | | | | | | +--Bacteroides cellulosolvens ATCC 35603 (1) | | | | | | | +--Acetivibrio ethanolgignens (1) | | | | | | | +--Ruminococcus flavefaciens (1) | | | | | | | +--Ruminococcus torques L2-14 (1) | | | | | | | +--Ruminococcus lactaris ATCC 29176 (1) | | | | | | | +--Subdoligranulum variabile DSM 15176 (1) | | | | | +--Blautia hydrogenotrophica DSM 10507 (1) | | | | | +--Lachnospiraceae bacterium 3_1_57FAA_CT1 (2) | | | | | +--Lachnospiraceae bacterium 3_1_46FAA (1) | | | | | +--Lachnospiraceae bacterium A2 (2) | | | | | +--ClostridialesFamilyXIII.IncertaeSedis (2) | | | | | | | +--Mogibacterium sp. CM50 (1) | | | | | | | +--Mogibacterium pumilum (1) | | | | | +--Clostridiaceae (39) | | | | | | | +--Clostridium aceticum (1) | | | | | | | +--Clostridium saccharolyticum WM1 (2) | | | | | | | +--Clostridium formicaceticum (1) | | | | | | | +--Clostridium sp. M62/1 (1) | | | | | | | +--Clostridium methylpentosum DSM 5476 (1) | | | | | | | +--Clostridium perfringens str. 13 (1) | | | | | | | +--Clostridium fallax (1) | | | | | | | +--Clostridium cellulosi (1) | | | | | | | +--Clostridium sp. D5 (2) | | | | | | | +--Clostridium sp. 7_2_43FAA (1) | | | | | | | +--Clostridium phytofermentans ISDg (2) | | | | | | | +--Clostridium cellulovorans 743B (1) | | | | | | | +--Clostridium purinilyticum (1) | | | | | | | +--Clostridium clostridioforme 2_1_49FAA (1) | | | | | | | +--Clostridium hathewayi WAL-18680 (2) | | | | | | | +--Clostridium roseum (1) | | | | | | | +--Clostridium sp. ASF502 (1) | | | | | | | +--Clostridium cf. saccharolyticum K10 (1) | | | | | | | +--Clostridium asparagiforme DSM 15981 (1) | | | | | | | +--Clostridium hungatei (1) | | | | | | | +--Clostridium sp. MSTE9 (1) | | | | | | | +--Clostridium paraputrificum (1) | | | | | | | +--Caloramator australicus RC3 (1) | | | | | | | +--Alkaliphilus oremlandii OhILAs (1) | | | | | | | +--Clostridium scindens ATCC 35704 (1) | | | | | | | +--Clostridium halophilum (1) | | | | | | | +--Clostridium sp. 7_3_54FAA (1) | | | | | | | +--Clostridium sp. SY8519 (1) | | | | | | | +--Clostridium thermocellum ATCC 27405 (1) | | | | | | | +--Clostridium celerecrescens (1) | | | | | | | +--Clostridium sp. ASF356 (2) | | | | | | | +--Clostridium symbiosum WAL-14163 (1) | | | | | | | +--Clostridium hylemonae DSM 15053 (1) | | | | | | | +--Clostridium neopropionicum (1) | | | | | +--Lachnospiraceae bacterium 1_4_56FAA (1) | | | | | +--Lachnospiraceae bacterium 3-1 (2) | | | | | +--Syntrophomonadaceae (1) | | | | | | | +--Dethiobacter alkaliphilus AHT 1 (1) | | | | | +--Peptococcaceae (1) | | | | | | | +--Thermincola potens JR (1) | | | | | +--Lachnospiraceae bacterium 2_1_46FAA (2) | | | | | +--Lachnospiraceae oral taxon 107 str. F0167 (1) | | | | | +--Lachnospiraceae bacterium 28-4 (1) | | | | | +--Lachnospiraceae bacterium 5_1_57FAA (2) | | | | | +--Lachnospiraceae bacterium A4 (2) | | | +--Lactobacillales (20) | | | | | +--Streptococcaceae (11) | | | | | | | +--Streptococcus parauberis NCFD 2020 (1) | | | | | | | +--Streptococcus equi subsp. zooepidemicus (1) | | | | | | | +--Lactococcus garvieae Lg2 (1) | | | | | | | +--Streptococcus phocae (1) | | | | | | | +--Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 (1) | | | | | | | +--Streptococcus sinensis (1) | | | | | | | +--Streptococcus ictaluri 707-05 (1) | | | | | | | +--Streptococcus uberis (1) | | | | | | | +--Lactococcus lactis subsp. lactis Il1403 (1) | | | | | | | +--Streptococcus pseudoporcinus LQ 940-04 (1) | | | | | | | +--Streptococcus uberis 0140J (1) | | | | | +--Enterococcaceae (2) | | | | | | | +--Pilibacter termitis (1) | | | | | | | +--Vagococcus teuberi (1) | | | | | +--Weissella viridescens (1) | | | | | +--Lactobacillaceae (6) | | | | | +--Lactobacillus plantarum WCFS1 (1) | | | | | +--Pediococcus pentosaceus ATCC 25745 (1) | | | | | +--Lactobacillus ruminis ATCC 27782 (1) | | | | | +--Lactobacillus acidipiscis (1) | | | | | +--Lactobacillus fructivorans (1) | | | | | +--Pediococcus stilesii (1) | | | +--Negativicutes (3) | | | | | +--Selenomonadales (3) | | | | | +--Veillonellaceae (3) | | | | | +--Megamonas hypermegale ART12/1 (1) | | | | | +--Thermosinus carboxydivorans Nor1 (1) | | | | | +--Pelosinus sp. UFO1 (1) | | | +--Bacillales (38) | | | +--Bacillus tusciae DSM 2912 (1) | | | +--Planococcaceae (4) | | | | | +--'Jeotgalibacillus soli' Cunha et al. 2011 (1) | | | | | +--Jeotgalibacillus campisalis (1) | | | | | +--Caryophanon tenue (1) | | | | | +--Rummeliibacillus stabekisii (1) | | | +--Paenibacillaceae (4) | | | | | +--Thermobacillus composti KWC4 (1) | | | | | +--Paenibacillus sp. JDR-2 (1) | | | | | +--Paenibacillus curdlanolyticus YK9 (1) | | | | | +--Aneurinibacillusgroup (1) | | | | | +--Aneurinibacillus migulanus (1) | | | +--Bacillaceae (28) | | | | | +--Bacillus subterraneus (1) | | | | | +--Bacillus megaterium QM B1551 (1) | | | | | +--Bacillus pseudalcaliphilus (1) | | | | | +--Bacillus krulwichiae (1) | | | | | +--Bacillus sporothermodurans (1) | | | | | +--Bacillus amyloliquefaciens FZB42 (1) | | | | | +--Bacillus arseniciselenatis (1) | | | | | +--Bacillus coagulans 36D1 (1) | | | | | +--Bacillus atrophaeus 1942 (1) | | | | | +--Bacillus licheniformis ATCC 14580 (1) | | | | | +--Bacillus badius (1) | | | | | +--Halobacillus halophilus DSM 2266 (1) | | | | | +--Bacillus pseudofirmus OF4 (1) | | | | | +--Bacillus sp. 1NLA3E (1) | | | | | +--Bacillus aminovorans (1) | | | | | +--Halobacillus karajensis (1) | | | | | +--Virgibacillus sp. SK37 (1) | | | | | +--Bacillus sp. NIOC16 (1) | | | | | +--Bacillus halodurans C-125 (1) | | | | | +--Bacillus litoralis (1) | | | | | +--Halobacillus mangrovi (1) | | | | | +--Bacillus pumilus SAFR-032 (1) | | | | | +--Oceanobacillus oncorhynchi (1) | | | | | +--Anoxybacillus amylolyticus (1) | | | | | +--Bacillus subtilis subsp. subtilis str. 168 (1) | | | | | +--Anaerobacillus alkalilacustre (1) | | | | | +--Bacillus clausii KSM-K16 (1) | | | | | +--Bacillus sp. OxB-1 (1) | | | +--Thermoactinomycetaceae (1) | | | +--Thermoactinomyces vulgaris (1) | +--rumen bacterium NK4B19 (1) | +--unclassified sequences (116)